RNA–Protein interactions for RNA: ENST00000617835.4

FLT1-208, Transcript of fms related tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene FLT1, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLT1-208ENST00000617835 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
FLT1-208ENST00000617835 ABCC9O60706 1549 aa19.59■□□□□ 0.73
FLT1-208ENST00000617835 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
FLT1-208ENST00000617835 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
FLT1-208ENST00000617835 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
FLT1-208ENST00000617835 NACADO15069 1562 aa18.48■□□□□ 0.55
FLT1-208ENST00000617835 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
FLT1-208ENST00000617835 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
FLT1-208ENST00000617835 MYO15BQ96JP2 1530 aa18.24■□□□□ 0.51
FLT1-208ENST00000617835 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
FLT1-208ENST00000617835 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
FLT1-208ENST00000617835 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
FLT1-208ENST00000617835 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
FLT1-208ENST00000617835 SCRIBQ14160 1630 aa17.92■□□□□ 0.46
FLT1-208ENST00000617835 SHROOM4Q9ULL8 1493 aa17.79■□□□□ 0.44
FLT1-208ENST00000617835 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
FLT1-208ENST00000617835 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
FLT1-208ENST00000617835 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
FLT1-208ENST00000617835 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
FLT1-208ENST00000617835 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
FLT1-208ENST00000617835 SMARCA4P51532 1647 aa17.07■□□□□ 0.32
FLT1-208ENST00000617835 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
FLT1-208ENST00000617835 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
FLT1-208ENST00000617835 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
FLT1-208ENST00000617835 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
FLT1-208ENST00000617835 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
FLT1-208ENST00000617835 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
FLT1-208ENST00000617835 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
FLT1-208ENST00000617835 NESP48681 1621 aa16.86■□□□□ 0.29
FLT1-208ENST00000617835 CUX2O14529 1486 aa16.76■□□□□ 0.27
FLT1-208ENST00000617835 WIZO95785 1651 aa16.69■□□□□ 0.26
FLT1-208ENST00000617835 DNAJC5Q9H3Z4 198 aa16.68■□□□□ 0.26
FLT1-208ENST00000617835 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
FLT1-208ENST00000617835 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
FLT1-208ENST00000617835 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
FLT1-208ENST00000617835 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
FLT1-208ENST00000617835 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
FLT1-208ENST00000617835 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
FLT1-208ENST00000617835 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
FLT1-208ENST00000617835 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
FLT1-208ENST00000617835 CFTRP13569 1480 aa16.42■□□□□ 0.22
FLT1-208ENST00000617835 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
FLT1-208ENST00000617835 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
FLT1-208ENST00000617835 WDR62O43379 1518 aa16.4■□□□□ 0.22
FLT1-208ENST00000617835 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
FLT1-208ENST00000617835 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
FLT1-208ENST00000617835 PRDM2Q13029 1718 aa16.13■□□□□ 0.17
FLT1-208ENST00000617835 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
FLT1-208ENST00000617835 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
FLT1-208ENST00000617835 IFT140Q96RY7 1462 aa16.08■□□□□ 0.16
FLT1-208ENST00000617835 TRIM41Q8WV44 630 aa16.04■□□□□ 0.16
FLT1-208ENST00000617835 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
FLT1-208ENST00000617835 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
FLT1-208ENST00000617835 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
FLT1-208ENST00000617835 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
FLT1-208ENST00000617835 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
FLT1-208ENST00000617835 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.14
FLT1-208ENST00000617835 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.14
FLT1-208ENST00000617835 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
FLT1-208ENST00000617835 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
FLT1-208ENST00000617835 SOGA1O94964 1423 aa15.9■□□□□ 0.14
FLT1-208ENST00000617835 CUX1P39880 1505 aa15.89■□□□□ 0.13
FLT1-208ENST00000617835 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
FLT1-208ENST00000617835 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
FLT1-208ENST00000617835 FBLN2P98095 1184 aa15.83■□□□□ 0.12
FLT1-208ENST00000617835 RIMBP3CA6NJZ7 1639 aa15.81■□□□□ 0.12
FLT1-208ENST00000617835 RIMBP3BA6NNM3 1639 aa15.81■□□□□ 0.12
FLT1-208ENST00000617835 RIMBP3Q9UFD9 1639 aa15.81■□□□□ 0.12
FLT1-208ENST00000617835 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
FLT1-208ENST00000617835 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
FLT1-208ENST00000617835 CHD1O14646 1710 aa15.77■□□□□ 0.12
FLT1-208ENST00000617835 GRIN2BQ13224 1484 aa15.73■□□□□ 0.11
FLT1-208ENST00000617835 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
FLT1-208ENST00000617835 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
FLT1-208ENST00000617835 MAGI1Q96QZ7 1491 aaPredicted RBP15.7■□□□□ 0.1
FLT1-208ENST00000617835 CYB5RLQ6IPT4 315 aa15.69■□□□□ 0.1
FLT1-208ENST00000617835 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
FLT1-208ENST00000617835 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
FLT1-208ENST00000617835 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
FLT1-208ENST00000617835 SYNJ2O15056 1496 aa15.66■□□□□ 0.1
FLT1-208ENST00000617835 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
FLT1-208ENST00000617835 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
FLT1-208ENST00000617835 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
FLT1-208ENST00000617835 ABCA5Q8WWZ7 1642 aa15.65■□□□□ 0.1
FLT1-208ENST00000617835 TOP2BQ02880 1626 aa15.62■□□□□ 0.09
FLT1-208ENST00000617835 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
FLT1-208ENST00000617835 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
FLT1-208ENST00000617835 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
FLT1-208ENST00000617835 GRIN2AQ12879 1464 aa15.53■□□□□ 0.08
FLT1-208ENST00000617835 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
FLT1-208ENST00000617835 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
FLT1-208ENST00000617835 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
FLT1-208ENST00000617835 NUP160Q12769 1436 aa15.48■□□□□ 0.07
FLT1-208ENST00000617835 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
FLT1-208ENST00000617835 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
FLT1-208ENST00000617835 SHROOM2Q13796 1616 aa15.36■□□□□ 0.05
FLT1-208ENST00000617835 IGF1RP08069 1367 aa15.36■□□□□ 0.05
FLT1-208ENST00000617835 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
FLT1-208ENST00000617835 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
FLT1-208ENST00000617835 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms