RNA–Protein interactions for RNA: ENST00000617753.4

LTBP4-235, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-235ENST00000617753 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
LTBP4-235ENST00000617753 CCDC180Q9P1Z9 1646 aa37.2■■■■□ 3.55
LTBP4-235ENST00000617753 ABCC9O60706 1549 aa36.81■■■■□ 3.48
LTBP4-235ENST00000617753 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
LTBP4-235ENST00000617753 NACADO15069 1562 aa35.07■■■■□ 3.2
LTBP4-235ENST00000617753 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
LTBP4-235ENST00000617753 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
LTBP4-235ENST00000617753 ZCCHC6Q5VYS8 1495 aaKnown RBP34.58■■■■□ 3.13
LTBP4-235ENST00000617753 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
LTBP4-235ENST00000617753 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
LTBP4-235ENST00000617753 PABPN1Q86U42 306 aaKnown RBP eCLIP34.32■■■■□ 3.08
LTBP4-235ENST00000617753 BICRAQ9NZM4 1560 aa34.12■■■■□ 3.05
LTBP4-235ENST00000617753 DNAJC5BQ9UF47 199 aa34.1■■■■□ 3.05
LTBP4-235ENST00000617753 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
LTBP4-235ENST00000617753 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
LTBP4-235ENST00000617753 EIF4G1Q04637 1599 aaKnown RBP33.3■■■□□ 2.92
LTBP4-235ENST00000617753 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
LTBP4-235ENST00000617753 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
LTBP4-235ENST00000617753 SMARCA4P51532 1647 aa32.39■■■□□ 2.78
LTBP4-235ENST00000617753 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
LTBP4-235ENST00000617753 ATAD2BQ9ULI0 1458 aa32.31■■■□□ 2.76
LTBP4-235ENST00000617753 BAZ1AQ9NRL2 1556 aaPredicted RBP32.3■■■□□ 2.76
LTBP4-235ENST00000617753 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
LTBP4-235ENST00000617753 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
LTBP4-235ENST00000617753 MROH2BQ7Z745 1585 aa32.07■■■□□ 2.72
LTBP4-235ENST00000617753 BAZ1BQ9UIG0 1483 aaKnown RBP32.06■■■□□ 2.72
LTBP4-235ENST00000617753 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
LTBP4-235ENST00000617753 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
LTBP4-235ENST00000617753 NESP48681 1621 aa31.71■■■□□ 2.67
LTBP4-235ENST00000617753 WIZO95785 1651 aa31.7■■■□□ 2.67
LTBP4-235ENST00000617753 LAMC3Q9Y6N6 1575 aa31.58■■■□□ 2.65
LTBP4-235ENST00000617753 CUX2O14529 1486 aa31.58■■■□□ 2.65
LTBP4-235ENST00000617753 RSF1Q96T23 1441 aaPredicted RBP31.54■■■□□ 2.64
LTBP4-235ENST00000617753 PDS5BQ9NTI5 1447 aa31.4■■■□□ 2.62
LTBP4-235ENST00000617753 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.62
LTBP4-235ENST00000617753 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
LTBP4-235ENST00000617753 KIF21AQ7Z4S6 1674 aa31.34■■■□□ 2.61
LTBP4-235ENST00000617753 THOC2Q8NI27 1593 aaKnown RBP31.33■■■□□ 2.61
LTBP4-235ENST00000617753 CFTRP13569 1480 aa31.12■■■□□ 2.57
LTBP4-235ENST00000617753 MRC2Q9UBG0 1479 aa31.1■■■□□ 2.57
LTBP4-235ENST00000617753 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
LTBP4-235ENST00000617753 DNAJC5Q9H3Z4 198 aa31.06■■■□□ 2.56
LTBP4-235ENST00000617753 FANCD2Q9BXW9 1451 aa31.06■■■□□ 2.56
LTBP4-235ENST00000617753 WDR62O43379 1518 aa31■■■□□ 2.55
LTBP4-235ENST00000617753 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
LTBP4-235ENST00000617753 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
LTBP4-235ENST00000617753 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
LTBP4-235ENST00000617753 TOPBP1Q92547 1522 aa30.51■■■□□ 2.47
LTBP4-235ENST00000617753 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
LTBP4-235ENST00000617753 ABCC8Q09428 1581 aa30.49■■■□□ 2.47
LTBP4-235ENST00000617753 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
LTBP4-235ENST00000617753 IFT140Q96RY7 1462 aa30.43■■■□□ 2.46
LTBP4-235ENST00000617753 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
LTBP4-235ENST00000617753 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
LTBP4-235ENST00000617753 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
LTBP4-235ENST00000617753 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
LTBP4-235ENST00000617753 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
LTBP4-235ENST00000617753 CUX1P39880 1505 aa30.11■■■□□ 2.41
LTBP4-235ENST00000617753 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
LTBP4-235ENST00000617753 AQRO60306 1485 aaKnown RBP eCLIP30.09■■■□□ 2.416e-9■■■□□ 17.8
LTBP4-235ENST00000617753 SOGA1O94964 1423 aa30.09■■■□□ 2.41
LTBP4-235ENST00000617753 RAD54L2Q9Y4B4 1467 aa30.09■■■□□ 2.41
LTBP4-235ENST00000617753 TDRD9Q8NDG6 1382 aaKnown RBP29.97■■■□□ 2.39
LTBP4-235ENST00000617753 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
LTBP4-235ENST00000617753 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
LTBP4-235ENST00000617753 CHD1O14646 1710 aa29.88■■■□□ 2.37
LTBP4-235ENST00000617753 FBLN2P98095 1184 aa29.86■■■□□ 2.37
LTBP4-235ENST00000617753 SNAPC4Q5SXM2 1469 aa29.82■■■□□ 2.36
LTBP4-235ENST00000617753 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
LTBP4-235ENST00000617753 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
LTBP4-235ENST00000617753 ABCA10Q8WWZ4 1543 aa29.76■■■□□ 2.36
LTBP4-235ENST00000617753 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
LTBP4-235ENST00000617753 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 BIVM-ERCC5R4GMW8 1640 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
LTBP4-235ENST00000617753 SYNJ1O43426 1573 aa29.72■■■□□ 2.35
LTBP4-235ENST00000617753 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
LTBP4-235ENST00000617753 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
LTBP4-235ENST00000617753 CHMP7Q8WUX9 453 aaPredicted RBP29.69■■■□□ 2.34
LTBP4-235ENST00000617753 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
LTBP4-235ENST00000617753 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
LTBP4-235ENST00000617753 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
LTBP4-235ENST00000617753 CYB5RLQ6IPT4 315 aa29.47■■■□□ 2.31
LTBP4-235ENST00000617753 ADAMTS12P58397 1594 aa29.45■■■□□ 2.31
LTBP4-235ENST00000617753 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
LTBP4-235ENST00000617753 GRIN2AQ12879 1464 aa29.41■■■□□ 2.3
LTBP4-235ENST00000617753 ERICH3Q5RHP9 1530 aa29.4■■■□□ 2.3
LTBP4-235ENST00000617753 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
LTBP4-235ENST00000617753 NUP160Q12769 1436 aa29.28■■■□□ 2.28
LTBP4-235ENST00000617753 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
LTBP4-235ENST00000617753 KIF27Q86VH2 1401 aa29.21■■■□□ 2.27
LTBP4-235ENST00000617753 SHROOM2Q13796 1616 aa29.1■■■□□ 2.25
LTBP4-235ENST00000617753 IGF1RP08069 1367 aa29.09■■■□□ 2.25
LTBP4-235ENST00000617753 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
LTBP4-235ENST00000617753 CUL7Q14999 1698 aa29.08■■■□□ 2.25
LTBP4-235ENST00000617753 TRHP20396 242 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-235ENST00000617753 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms