RNA–Protein interactions for RNA: ENST00000617626.1

U1.41-201, humanhuman

BASIC

Gene U1, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.41-201ENST00000617626 NISCHQ9Y2I1 1504 aa15.47■□□□□ 0.07
U1.41-201ENST00000617626 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
U1.41-201ENST00000617626 ABCC9O60706 1549 aa13.62□□□□□ -0.23
U1.41-201ENST00000617626 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
U1.41-201ENST00000617626 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
U1.41-201ENST00000617626 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
U1.41-201ENST00000617626 NACADO15069 1562 aa12.85□□□□□ -0.35
U1.41-201ENST00000617626 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
U1.41-201ENST00000617626 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
U1.41-201ENST00000617626 MYO15BQ96JP2 1530 aa12.81□□□□□ -0.36
U1.41-201ENST00000617626 PABPN1Q86U42 306 aaKnown RBP eCLIP12.68□□□□□ -0.38
U1.41-201ENST00000617626 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
U1.41-201ENST00000617626 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
U1.41-201ENST00000617626 SCRIBQ14160 1630 aa12.51□□□□□ -0.41
U1.41-201ENST00000617626 SHROOM4Q9ULL8 1493 aa12.33□□□□□ -0.44
U1.41-201ENST00000617626 CC2D2AQ9P2K1 1620 aa12.29□□□□□ -0.44
U1.41-201ENST00000617626 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
U1.41-201ENST00000617626 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
U1.41-201ENST00000617626 EIF4G1Q04637 1599 aaKnown RBP12.14□□□□□ -0.47
U1.41-201ENST00000617626 BAZ1AQ9NRL2 1556 aaPredicted RBP12.01□□□□□ -0.49
U1.41-201ENST00000617626 SMARCA4P51532 1647 aa11.98□□□□□ -0.49
U1.41-201ENST00000617626 MROH2BQ7Z745 1585 aa11.9□□□□□ -0.5
U1.41-201ENST00000617626 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
U1.41-201ENST00000617626 ATAD2BQ9ULI0 1458 aa11.85□□□□□ -0.51
U1.41-201ENST00000617626 PEG3Q9GZU2 1588 aa11.84□□□□□ -0.51
U1.41-201ENST00000617626 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
U1.41-201ENST00000617626 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
U1.41-201ENST00000617626 WIZO95785 1651 aa11.81□□□□□ -0.52
U1.41-201ENST00000617626 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
U1.41-201ENST00000617626 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
U1.41-201ENST00000617626 CUX2O14529 1486 aa11.71□□□□□ -0.53
U1.41-201ENST00000617626 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
U1.41-201ENST00000617626 TOP2AP11388 1531 aaKnown RBP11.7□□□□□ -0.54
U1.41-201ENST00000617626 NESP48681 1621 aa11.69□□□□□ -0.54
U1.41-201ENST00000617626 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
U1.41-201ENST00000617626 THOC2Q8NI27 1593 aaKnown RBP11.56□□□□□ -0.56
U1.41-201ENST00000617626 CCDC88BA6NC98 1476 aa11.55□□□□□ -0.56
U1.41-201ENST00000617626 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
U1.41-201ENST00000617626 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
U1.41-201ENST00000617626 KIF21AQ7Z4S6 1674 aa11.49□□□□□ -0.57
U1.41-201ENST00000617626 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
U1.41-201ENST00000617626 PRDM2Q13029 1718 aa11.46□□□□□ -0.58
U1.41-201ENST00000617626 CFTRP13569 1480 aa11.44□□□□□ -0.58
U1.41-201ENST00000617626 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
U1.41-201ENST00000617626 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
U1.41-201ENST00000617626 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
U1.41-201ENST00000617626 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
U1.41-201ENST00000617626 ABCC8Q09428 1581 aa11.26□□□□□ -0.61
U1.41-201ENST00000617626 WDR62O43379 1518 aa11.25□□□□□ -0.61
U1.41-201ENST00000617626 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
U1.41-201ENST00000617626 URB2Q14146 1524 aaKnown RBP11.21□□□□□ -0.61
U1.41-201ENST00000617626 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
U1.41-201ENST00000617626 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
U1.41-201ENST00000617626 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
U1.41-201ENST00000617626 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
U1.41-201ENST00000617626 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
U1.41-201ENST00000617626 CUX1P39880 1505 aa11.16□□□□□ -0.62
U1.41-201ENST00000617626 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
U1.41-201ENST00000617626 BIVM-ERCC5R4GMW8 1640 aa11.15□□□□□ -0.62
U1.41-201ENST00000617626 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
U1.41-201ENST00000617626 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
U1.41-201ENST00000617626 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
U1.41-201ENST00000617626 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
U1.41-201ENST00000617626 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
U1.41-201ENST00000617626 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
U1.41-201ENST00000617626 SOGA1O94964 1423 aa11.09□□□□□ -0.63
U1.41-201ENST00000617626 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
U1.41-201ENST00000617626 ARHGEF11O15085 1522 aa11.05□□□□□ -0.64
U1.41-201ENST00000617626 RAD54L2Q9Y4B4 1467 aa11.05□□□□□ -0.64
U1.41-201ENST00000617626 WDR97A6NE52 1622 aa11.04□□□□□ -0.64
U1.41-201ENST00000617626 ABCA10Q8WWZ4 1543 aa11.02□□□□□ -0.65
U1.41-201ENST00000617626 CHIC1Q5VXU3 224 aa11.01□□□□□ -0.65
U1.41-201ENST00000617626 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
U1.41-201ENST00000617626 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
U1.41-201ENST00000617626 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
U1.41-201ENST00000617626 ARAP1Q96P48 1450 aa10.97□□□□□ -0.65
U1.41-201ENST00000617626 CHD1O14646 1710 aa10.97□□□□□ -0.65
U1.41-201ENST00000617626 PBRM1Q86U86 1689 aa10.96□□□□□ -0.65
U1.41-201ENST00000617626 ABCA5Q8WWZ7 1642 aa10.96□□□□□ -0.65
U1.41-201ENST00000617626 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.65
U1.41-201ENST00000617626 GAPVD1Q14C86 1478 aa10.96□□□□□ -0.65
U1.41-201ENST00000617626 KIF27Q86VH2 1401 aa10.96□□□□□ -0.65
U1.41-201ENST00000617626 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
U1.41-201ENST00000617626 ERICH3Q5RHP9 1530 aa10.91□□□□□ -0.66
U1.41-201ENST00000617626 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
U1.41-201ENST00000617626 TRHP20396 242 aaPredicted RBP10.9□□□□□ -0.66
U1.41-201ENST00000617626 SNAPC4Q5SXM2 1469 aa10.89□□□□□ -0.67
U1.41-201ENST00000617626 EEA1Q15075 1411 aa10.89□□□□□ -0.67
U1.41-201ENST00000617626 CUL7Q14999 1698 aa10.88□□□□□ -0.67
U1.41-201ENST00000617626 FBLN2P98095 1184 aa10.85□□□□□ -0.67
U1.41-201ENST00000617626 CHMP7Q8WUX9 453 aaPredicted RBP10.85□□□□□ -0.67
U1.41-201ENST00000617626 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
U1.41-201ENST00000617626 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
U1.41-201ENST00000617626 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
U1.41-201ENST00000617626 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
U1.41-201ENST00000617626 IGF1RP08069 1367 aa10.84□□□□□ -0.67
U1.41-201ENST00000617626 FAM9AQ8IZU1 332 aaPredicted RBP10.82□□□□□ -0.68
U1.41-201ENST00000617626 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
U1.41-201ENST00000617626 CARMIL1Q5VZK9 1371 aa10.81□□□□□ -0.68
U1.41-201ENST00000617626 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms