RNA–Protein interactions for RNA: ENST00000617566.1

PCDHAC2-204, Transcript of protocadherin alpha subfamily C, 2, humanhuman

TSL 2

Gene PCDHAC2, Length 284 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2-204ENST00000617566 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
PCDHAC2-204ENST00000617566 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
PCDHAC2-204ENST00000617566 ABCC9O60706 1549 aa26.41■■□□□ 1.82
PCDHAC2-204ENST00000617566 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
PCDHAC2-204ENST00000617566 NACADO15069 1562 aa25.01■■□□□ 1.59
PCDHAC2-204ENST00000617566 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
PCDHAC2-204ENST00000617566 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
PCDHAC2-204ENST00000617566 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
PCDHAC2-204ENST00000617566 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
PCDHAC2-204ENST00000617566 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
PCDHAC2-204ENST00000617566 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
PCDHAC2-204ENST00000617566 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
PCDHAC2-204ENST00000617566 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
PCDHAC2-204ENST00000617566 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
PCDHAC2-204ENST00000617566 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
PCDHAC2-204ENST00000617566 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
PCDHAC2-204ENST00000617566 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
PCDHAC2-204ENST00000617566 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
PCDHAC2-204ENST00000617566 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
PCDHAC2-204ENST00000617566 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
PCDHAC2-204ENST00000617566 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
PCDHAC2-204ENST00000617566 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
PCDHAC2-204ENST00000617566 HMGXB3Q12766 1538 aa22.94■■□□□ 1.26
PCDHAC2-204ENST00000617566 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
PCDHAC2-204ENST00000617566 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
PCDHAC2-204ENST00000617566 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
PCDHAC2-204ENST00000617566 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
PCDHAC2-204ENST00000617566 CUX2O14529 1486 aa22.74■■□□□ 1.23
PCDHAC2-204ENST00000617566 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
PCDHAC2-204ENST00000617566 NESP48681 1621 aa22.7■■□□□ 1.22
PCDHAC2-204ENST00000617566 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
PCDHAC2-204ENST00000617566 DNAJC5Q9H3Z4 198 aa22.56■■□□□ 1.2
PCDHAC2-204ENST00000617566 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
PCDHAC2-204ENST00000617566 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
PCDHAC2-204ENST00000617566 WIZO95785 1651 aa22.53■■□□□ 1.2
PCDHAC2-204ENST00000617566 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
PCDHAC2-204ENST00000617566 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
PCDHAC2-204ENST00000617566 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
PCDHAC2-204ENST00000617566 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
PCDHAC2-204ENST00000617566 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
PCDHAC2-204ENST00000617566 WDR62O43379 1518 aa22.2■■□□□ 1.14
PCDHAC2-204ENST00000617566 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
PCDHAC2-204ENST00000617566 PRDM2Q13029 1718 aa22.14■■□□□ 1.14
PCDHAC2-204ENST00000617566 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
PCDHAC2-204ENST00000617566 CFTRP13569 1480 aa22.09■■□□□ 1.13
PCDHAC2-204ENST00000617566 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
PCDHAC2-204ENST00000617566 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
PCDHAC2-204ENST00000617566 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
PCDHAC2-204ENST00000617566 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
PCDHAC2-204ENST00000617566 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
PCDHAC2-204ENST00000617566 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
PCDHAC2-204ENST00000617566 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
PCDHAC2-204ENST00000617566 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
PCDHAC2-204ENST00000617566 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.05
PCDHAC2-204ENST00000617566 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
PCDHAC2-204ENST00000617566 TARBP1Q13395 1621 aaKnown RBP21.56■■□□□ 1.04
PCDHAC2-204ENST00000617566 CHD1O14646 1710 aa21.53■■□□□ 1.04
PCDHAC2-204ENST00000617566 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
PCDHAC2-204ENST00000617566 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
PCDHAC2-204ENST00000617566 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
PCDHAC2-204ENST00000617566 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
PCDHAC2-204ENST00000617566 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.02
PCDHAC2-204ENST00000617566 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
PCDHAC2-204ENST00000617566 ARHGEF11O15085 1522 aa21.38■■□□□ 1.01
PCDHAC2-204ENST00000617566 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
PCDHAC2-204ENST00000617566 CUX1P39880 1505 aa21.36■■□□□ 1.01
PCDHAC2-204ENST00000617566 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
PCDHAC2-204ENST00000617566 SOGA1O94964 1423 aa21.35■■□□□ 1.01
PCDHAC2-204ENST00000617566 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
PCDHAC2-204ENST00000617566 PBRM1Q86U86 1689 aa21.28■■□□□ 1
PCDHAC2-204ENST00000617566 FBLN2P98095 1184 aa21.28■■□□□ 1
PCDHAC2-204ENST00000617566 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
PCDHAC2-204ENST00000617566 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
PCDHAC2-204ENST00000617566 MAGI1Q96QZ7 1491 aaPredicted RBP21.21■□□□□ 0.99
PCDHAC2-204ENST00000617566 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
PCDHAC2-204ENST00000617566 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PCDHAC2-204ENST00000617566 ABCA5Q8WWZ7 1642 aa21.16■□□□□ 0.98
PCDHAC2-204ENST00000617566 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
PCDHAC2-204ENST00000617566 ARAP1Q96P48 1450 aa21.16■□□□□ 0.98
PCDHAC2-204ENST00000617566 CYB5RLQ6IPT4 315 aa21.13■□□□□ 0.97
PCDHAC2-204ENST00000617566 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
PCDHAC2-204ENST00000617566 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
PCDHAC2-204ENST00000617566 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
PCDHAC2-204ENST00000617566 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
PCDHAC2-204ENST00000617566 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
PCDHAC2-204ENST00000617566 TOP2BQ02880 1626 aa21.07■□□□□ 0.96
PCDHAC2-204ENST00000617566 WRNQ14191 1432 aaPredicted RBP eCLIP21.02■□□□□ 0.96
PCDHAC2-204ENST00000617566 ADAMTS12P58397 1594 aa21■□□□□ 0.95
PCDHAC2-204ENST00000617566 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
PCDHAC2-204ENST00000617566 TRHP20396 242 aaPredicted RBP20.92■□□□□ 0.94
PCDHAC2-204ENST00000617566 CEP170Q5SW79 1584 aa20.9■□□□□ 0.94
PCDHAC2-204ENST00000617566 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
PCDHAC2-204ENST00000617566 FHAD1B1AJZ9 1412 aa20.84■□□□□ 0.93
PCDHAC2-204ENST00000617566 NUP160Q12769 1436 aa20.83■□□□□ 0.93
PCDHAC2-204ENST00000617566 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
PCDHAC2-204ENST00000617566 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
PCDHAC2-204ENST00000617566 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
PCDHAC2-204ENST00000617566 CUL7Q14999 1698 aa20.67■□□□□ 0.9
PCDHAC2-204ENST00000617566 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
PCDHAC2-204ENST00000617566 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1036.1 ms