RNA–Protein interactions for RNA: ENST00000617484.4

PPARGC1A-218, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5 BASIC

Gene PPARGC1A, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-218ENST00000617484 NISCHQ9Y2I1 1504 aa22.36■■□□□ 1.17
PPARGC1A-218ENST00000617484 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
PPARGC1A-218ENST00000617484 ABCC9O60706 1549 aa19.84■□□□□ 0.77
PPARGC1A-218ENST00000617484 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
PPARGC1A-218ENST00000617484 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
PPARGC1A-218ENST00000617484 NACADO15069 1562 aa18.81■□□□□ 0.6
PPARGC1A-218ENST00000617484 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
PPARGC1A-218ENST00000617484 DNAJC5BQ9UF47 199 aa18.6■□□□□ 0.57
PPARGC1A-218ENST00000617484 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
PPARGC1A-218ENST00000617484 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
PPARGC1A-218ENST00000617484 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
PPARGC1A-218ENST00000617484 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
PPARGC1A-218ENST00000617484 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
PPARGC1A-218ENST00000617484 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
PPARGC1A-218ENST00000617484 SHROOM4Q9ULL8 1493 aa18.08■□□□□ 0.49
PPARGC1A-218ENST00000617484 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
PPARGC1A-218ENST00000617484 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
PPARGC1A-218ENST00000617484 CECR2Q9BXF3 1484 aa17.83■□□□□ 0.45
PPARGC1A-218ENST00000617484 NCAPD3P42695 1498 aa17.43■□□□□ 0.38
PPARGC1A-218ENST00000617484 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
PPARGC1A-218ENST00000617484 SMARCA4P51532 1647 aa17.37■□□□□ 0.37
PPARGC1A-218ENST00000617484 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
PPARGC1A-218ENST00000617484 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
PPARGC1A-218ENST00000617484 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
PPARGC1A-218ENST00000617484 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
PPARGC1A-218ENST00000617484 PEG3Q9GZU2 1588 aa17.22■□□□□ 0.35
PPARGC1A-218ENST00000617484 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
PPARGC1A-218ENST00000617484 NESP48681 1621 aa17.13■□□□□ 0.33
PPARGC1A-218ENST00000617484 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
PPARGC1A-218ENST00000617484 WIZO95785 1651 aa17.02■□□□□ 0.32
PPARGC1A-218ENST00000617484 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
PPARGC1A-218ENST00000617484 CUX2O14529 1486 aa16.98■□□□□ 0.31
PPARGC1A-218ENST00000617484 LAMC3Q9Y6N6 1575 aa16.93■□□□□ 0.3
PPARGC1A-218ENST00000617484 CADPSQ9ULU8 1353 aa16.9■□□□□ 0.3
PPARGC1A-218ENST00000617484 DNAJC5Q9H3Z4 198 aa16.88■□□□□ 0.29
PPARGC1A-218ENST00000617484 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
PPARGC1A-218ENST00000617484 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
PPARGC1A-218ENST00000617484 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
PPARGC1A-218ENST00000617484 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
PPARGC1A-218ENST00000617484 CFTRP13569 1480 aa16.75■□□□□ 0.27
PPARGC1A-218ENST00000617484 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
PPARGC1A-218ENST00000617484 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
PPARGC1A-218ENST00000617484 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
PPARGC1A-218ENST00000617484 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
PPARGC1A-218ENST00000617484 WDR62O43379 1518 aa16.65■□□□□ 0.26
PPARGC1A-218ENST00000617484 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
PPARGC1A-218ENST00000617484 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
PPARGC1A-218ENST00000617484 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
PPARGC1A-218ENST00000617484 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
PPARGC1A-218ENST00000617484 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
PPARGC1A-218ENST00000617484 SUPT5HO00267 1087 aaKnown RBP16.34■□□□□ 0.21
PPARGC1A-218ENST00000617484 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
PPARGC1A-218ENST00000617484 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
PPARGC1A-218ENST00000617484 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
PPARGC1A-218ENST00000617484 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
PPARGC1A-218ENST00000617484 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
PPARGC1A-218ENST00000617484 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
PPARGC1A-218ENST00000617484 AQRO60306 1485 aaKnown RBP eCLIP16.23■□□□□ 0.196e-7■■■□□ 15.2
PPARGC1A-218ENST00000617484 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
PPARGC1A-218ENST00000617484 CUX1P39880 1505 aa16.2■□□□□ 0.18
PPARGC1A-218ENST00000617484 EIF4G3O43432 1585 aaKnown RBP16.18■□□□□ 0.18
PPARGC1A-218ENST00000617484 SOGA1O94964 1423 aa16.18■□□□□ 0.18
PPARGC1A-218ENST00000617484 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
PPARGC1A-218ENST00000617484 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
PPARGC1A-218ENST00000617484 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
PPARGC1A-218ENST00000617484 FBLN2P98095 1184 aa16.04■□□□□ 0.16
PPARGC1A-218ENST00000617484 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
PPARGC1A-218ENST00000617484 RIMBP3CA6NJZ7 1639 aa16.01■□□□□ 0.15
PPARGC1A-218ENST00000617484 RIMBP3BA6NNM3 1639 aa16.01■□□□□ 0.15
PPARGC1A-218ENST00000617484 RIMBP3Q9UFD9 1639 aa16.01■□□□□ 0.15
PPARGC1A-218ENST00000617484 CHD1O14646 1710 aa16■□□□□ 0.15
PPARGC1A-218ENST00000617484 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
PPARGC1A-218ENST00000617484 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
PPARGC1A-218ENST00000617484 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
PPARGC1A-218ENST00000617484 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
PPARGC1A-218ENST00000617484 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
PPARGC1A-218ENST00000617484 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
PPARGC1A-218ENST00000617484 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
PPARGC1A-218ENST00000617484 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
PPARGC1A-218ENST00000617484 CHMP7Q8WUX9 453 aaPredicted RBP15.94■□□□□ 0.14
PPARGC1A-218ENST00000617484 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
PPARGC1A-218ENST00000617484 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
PPARGC1A-218ENST00000617484 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
PPARGC1A-218ENST00000617484 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
PPARGC1A-218ENST00000617484 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
PPARGC1A-218ENST00000617484 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
PPARGC1A-218ENST00000617484 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
PPARGC1A-218ENST00000617484 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
PPARGC1A-218ENST00000617484 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
PPARGC1A-218ENST00000617484 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
PPARGC1A-218ENST00000617484 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
PPARGC1A-218ENST00000617484 NUP160Q12769 1436 aa15.77■□□□□ 0.11
PPARGC1A-218ENST00000617484 ERICH3Q5RHP9 1530 aa15.76■□□□□ 0.11
PPARGC1A-218ENST00000617484 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
PPARGC1A-218ENST00000617484 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
PPARGC1A-218ENST00000617484 IGF1RP08069 1367 aa15.7■□□□□ 0.1
PPARGC1A-218ENST00000617484 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
PPARGC1A-218ENST00000617484 SHROOM2Q13796 1616 aa15.63■□□□□ 0.09
PPARGC1A-218ENST00000617484 JPH4Q96JJ6 628 aa15.62■□□□□ 0.09
PPARGC1A-218ENST00000617484 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms