RNA–Protein interactions for RNA: ENST00000617232.1

RN7SL544P-201, Transcript of RNA, 7SL, cytoplasmic 544, pseudogene, humanhuman

BASIC

Gene RN7SL544P, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL544P-201ENST00000617232 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
RN7SL544P-201ENST00000617232 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
RN7SL544P-201ENST00000617232 ABCC9O60706 1549 aa12.37□□□□□ -0.43
RN7SL544P-201ENST00000617232 RB1CC1Q8TDY2 1594 aa11.96□□□□□ -0.5
RN7SL544P-201ENST00000617232 NACADO15069 1562 aa11.92□□□□□ -0.5
RN7SL544P-201ENST00000617232 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
RN7SL544P-201ENST00000617232 ZCCHC6Q5VYS8 1495 aaKnown RBP11.82□□□□□ -0.52
RN7SL544P-201ENST00000617232 DCAF1Q9Y4B6 1507 aa11.78□□□□□ -0.52
RN7SL544P-201ENST00000617232 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
RN7SL544P-201ENST00000617232 UNC13AQ9UPW8 1703 aa11.77□□□□□ -0.52
RN7SL544P-201ENST00000617232 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
RN7SL544P-201ENST00000617232 SCRIBQ14160 1630 aa11.53□□□□□ -0.56
RN7SL544P-201ENST00000617232 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
RN7SL544P-201ENST00000617232 SHROOM4Q9ULL8 1493 aa11.47□□□□□ -0.57
RN7SL544P-201ENST00000617232 DNAJC5BQ9UF47 199 aa11.37□□□□□ -0.59
RN7SL544P-201ENST00000617232 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
RN7SL544P-201ENST00000617232 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
RN7SL544P-201ENST00000617232 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
RN7SL544P-201ENST00000617232 SMARCA4P51532 1647 aa11.06□□□□□ -0.64
RN7SL544P-201ENST00000617232 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
RN7SL544P-201ENST00000617232 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
RN7SL544P-201ENST00000617232 NCAPD3P42695 1498 aa10.98□□□□□ -0.65
RN7SL544P-201ENST00000617232 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.65
RN7SL544P-201ENST00000617232 ATAD2BQ9ULI0 1458 aa10.96□□□□□ -0.65
RN7SL544P-201ENST00000617232 HMGXB3Q12766 1538 aa10.94□□□□□ -0.66
RN7SL544P-201ENST00000617232 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
RN7SL544P-201ENST00000617232 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
RN7SL544P-201ENST00000617232 WIZO95785 1651 aa10.85□□□□□ -0.67
RN7SL544P-201ENST00000617232 RSF1Q96T23 1441 aaPredicted RBP10.77□□□□□ -0.68
RN7SL544P-201ENST00000617232 LAMC3Q9Y6N6 1575 aa10.73□□□□□ -0.69
RN7SL544P-201ENST00000617232 TOP2AP11388 1531 aaKnown RBP10.72□□□□□ -0.69
RN7SL544P-201ENST00000617232 NESP48681 1621 aa10.7□□□□□ -0.7
RN7SL544P-201ENST00000617232 ERCC6Q03468 1493 aa10.67□□□□□ -0.7
RN7SL544P-201ENST00000617232 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
RN7SL544P-201ENST00000617232 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
RN7SL544P-201ENST00000617232 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
RN7SL544P-201ENST00000617232 THOC2Q8NI27 1593 aaKnown RBP10.61□□□□□ -0.71
RN7SL544P-201ENST00000617232 PDS5BQ9NTI5 1447 aa10.61□□□□□ -0.71
RN7SL544P-201ENST00000617232 CUX2O14529 1486 aa10.61□□□□□ -0.71
RN7SL544P-201ENST00000617232 CFTRP13569 1480 aa10.57□□□□□ -0.72
RN7SL544P-201ENST00000617232 CCDC88BA6NC98 1476 aa10.56□□□□□ -0.72
RN7SL544P-201ENST00000617232 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.73
RN7SL544P-201ENST00000617232 FANCD2Q9BXW9 1451 aa10.51□□□□□ -0.73
RN7SL544P-201ENST00000617232 MRC2Q9UBG0 1479 aa10.5□□□□□ -0.73
RN7SL544P-201ENST00000617232 WDR62O43379 1518 aa10.5□□□□□ -0.73
RN7SL544P-201ENST00000617232 URB2Q14146 1524 aaKnown RBP10.42□□□□□ -0.74
RN7SL544P-201ENST00000617232 SUPT5HO00267 1087 aaKnown RBP10.4□□□□□ -0.74
RN7SL544P-201ENST00000617232 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
RN7SL544P-201ENST00000617232 DNMBPQ6XZF7 1577 aa10.36□□□□□ -0.75
RN7SL544P-201ENST00000617232 TOPBP1Q92547 1522 aa10.35□□□□□ -0.75
RN7SL544P-201ENST00000617232 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
RN7SL544P-201ENST00000617232 DNAJC5Q9H3Z4 198 aa10.29□□□□□ -0.76
RN7SL544P-201ENST00000617232 IFT140Q96RY7 1462 aa10.29□□□□□ -0.76
RN7SL544P-201ENST00000617232 CUX1P39880 1505 aa10.27□□□□□ -0.77
RN7SL544P-201ENST00000617232 POLA1P09884 1462 aaPredicted RBP10.25□□□□□ -0.77
RN7SL544P-201ENST00000617232 EIF4G3O43432 1585 aaKnown RBP10.25□□□□□ -0.77
RN7SL544P-201ENST00000617232 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
RN7SL544P-201ENST00000617232 WDR97A6NE52 1622 aa10.23□□□□□ -0.77
RN7SL544P-201ENST00000617232 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
RN7SL544P-201ENST00000617232 FGD5Q6ZNL6 1462 aa10.23□□□□□ -0.77
RN7SL544P-201ENST00000617232 SOGA1O94964 1423 aa10.2□□□□□ -0.78
RN7SL544P-201ENST00000617232 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
RN7SL544P-201ENST00000617232 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
RN7SL544P-201ENST00000617232 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
RN7SL544P-201ENST00000617232 CHD1O14646 1710 aa10.17□□□□□ -0.78
RN7SL544P-201ENST00000617232 PBRM1Q86U86 1689 aa10.17□□□□□ -0.78
RN7SL544P-201ENST00000617232 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
RN7SL544P-201ENST00000617232 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
RN7SL544P-201ENST00000617232 ABCA5Q8WWZ7 1642 aa10.15□□□□□ -0.79
RN7SL544P-201ENST00000617232 ABCA10Q8WWZ4 1543 aa10.13□□□□□ -0.79
RN7SL544P-201ENST00000617232 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
RN7SL544P-201ENST00000617232 OSCARQ8IYS5 282 aa10.11□□□□□ -0.79
RN7SL544P-201ENST00000617232 GRIN2BQ13224 1484 aa10.1□□□□□ -0.79
RN7SL544P-201ENST00000617232 GAPVD1Q14C86 1478 aa10.1□□□□□ -0.79
RN7SL544P-201ENST00000617232 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
RN7SL544P-201ENST00000617232 SNAPC4Q5SXM2 1469 aa10.08□□□□□ -0.8
RN7SL544P-201ENST00000617232 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
RN7SL544P-201ENST00000617232 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
RN7SL544P-201ENST00000617232 ADAMTS12P58397 1594 aa10.03□□□□□ -0.8
RN7SL544P-201ENST00000617232 RIMBP3CA6NJZ7 1639 aa10.03□□□□□ -0.8
RN7SL544P-201ENST00000617232 RIMBP3BA6NNM3 1639 aa10.03□□□□□ -0.8
RN7SL544P-201ENST00000617232 RIMBP3Q9UFD9 1639 aa10.03□□□□□ -0.8
RN7SL544P-201ENST00000617232 FBLN2P98095 1184 aa10.01□□□□□ -0.81
RN7SL544P-201ENST00000617232 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
RN7SL544P-201ENST00000617232 CHMP7Q8WUX9 453 aaPredicted RBP9.99□□□□□ -0.81
RN7SL544P-201ENST00000617232 ARHGEF11O15085 1522 aa9.98□□□□□ -0.81
RN7SL544P-201ENST00000617232 GRIN2AQ12879 1464 aa9.98□□□□□ -0.81
RN7SL544P-201ENST00000617232 CUL7Q14999 1698 aa9.97□□□□□ -0.81
RN7SL544P-201ENST00000617232 FHAD1B1AJZ9 1412 aa9.97□□□□□ -0.81
RN7SL544P-201ENST00000617232 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
RN7SL544P-201ENST00000617232 CEP170Q5SW79 1584 aa9.95□□□□□ -0.82
RN7SL544P-201ENST00000617232 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
RN7SL544P-201ENST00000617232 NUP160Q12769 1436 aa9.92□□□□□ -0.82
RN7SL544P-201ENST00000617232 IGF1RP08069 1367 aa9.9□□□□□ -0.82
RN7SL544P-201ENST00000617232 RUSC2Q8N2Y8 1516 aa9.89□□□□□ -0.83
RN7SL544P-201ENST00000617232 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
RN7SL544P-201ENST00000617232 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
RN7SL544P-201ENST00000617232 ERCC6L2Q5T890 1561 aa9.84□□□□□ -0.83
RN7SL544P-201ENST00000617232 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
RN7SL544P-201ENST00000617232 CARMIL1Q5VZK9 1371 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms