RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 NISCHQ9Y2I1 1504 aa37.82■■■■□ 3.65
SRGAP2C-205ENST00000617209 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
SRGAP2C-205ENST00000617209 ABCC9O60706 1549 aa32.99■■■□□ 2.87
SRGAP2C-205ENST00000617209 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
SRGAP2C-205ENST00000617209 NACADO15069 1562 aa31.72■■■□□ 2.67
SRGAP2C-205ENST00000617209 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
SRGAP2C-205ENST00000617209 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
SRGAP2C-205ENST00000617209 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
SRGAP2C-205ENST00000617209 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
SRGAP2C-205ENST00000617209 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
SRGAP2C-205ENST00000617209 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
SRGAP2C-205ENST00000617209 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
SRGAP2C-205ENST00000617209 SCRIBQ14160 1630 aa30.63■■■□□ 2.49
SRGAP2C-205ENST00000617209 SHROOM4Q9ULL8 1493 aa30.51■■■□□ 2.48
SRGAP2C-205ENST00000617209 DNAJC5BQ9UF47 199 aa30.45■■■□□ 2.47
SRGAP2C-205ENST00000617209 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
SRGAP2C-205ENST00000617209 CC2D2AQ9P2K1 1620 aa29.87■■■□□ 2.37
SRGAP2C-205ENST00000617209 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
SRGAP2C-205ENST00000617209 SMARCA4P51532 1647 aa29.35■■■□□ 2.29
SRGAP2C-205ENST00000617209 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
SRGAP2C-205ENST00000617209 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
SRGAP2C-205ENST00000617209 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
SRGAP2C-205ENST00000617209 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
SRGAP2C-205ENST00000617209 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
SRGAP2C-205ENST00000617209 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
SRGAP2C-205ENST00000617209 HMGXB3Q12766 1538 aa29.1■■■□□ 2.25
SRGAP2C-205ENST00000617209 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
SRGAP2C-205ENST00000617209 WIZO95785 1651 aa28.79■■■□□ 2.2
SRGAP2C-205ENST00000617209 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
SRGAP2C-205ENST00000617209 NESP48681 1621 aa28.52■■■□□ 2.16
SRGAP2C-205ENST00000617209 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
SRGAP2C-205ENST00000617209 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SRGAP2C-205ENST00000617209 ERCC6Q03468 1493 aa28.45■■■□□ 2.14
SRGAP2C-205ENST00000617209 CADPSQ9ULU8 1353 aa28.39■■■□□ 2.14
SRGAP2C-205ENST00000617209 PDS5BQ9NTI5 1447 aa28.32■■■□□ 2.12
SRGAP2C-205ENST00000617209 CUX2O14529 1486 aa28.26■■■□□ 2.11
SRGAP2C-205ENST00000617209 CFTRP13569 1480 aa28.21■■■□□ 2.11
SRGAP2C-205ENST00000617209 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.11
SRGAP2C-205ENST00000617209 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
SRGAP2C-205ENST00000617209 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
SRGAP2C-205ENST00000617209 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
SRGAP2C-205ENST00000617209 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
SRGAP2C-205ENST00000617209 MRC2Q9UBG0 1479 aa27.99■■■□□ 2.07
SRGAP2C-205ENST00000617209 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
SRGAP2C-205ENST00000617209 WDR62O43379 1518 aa27.92■■■□□ 2.06
SRGAP2C-205ENST00000617209 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
SRGAP2C-205ENST00000617209 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
SRGAP2C-205ENST00000617209 ABCC8Q09428 1581 aa27.64■■■□□ 2.01
SRGAP2C-205ENST00000617209 TOPBP1Q92547 1522 aa27.57■■■□□ 2
SRGAP2C-205ENST00000617209 DNAJC5Q9H3Z4 198 aa27.57■■■□□ 2
SRGAP2C-205ENST00000617209 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
SRGAP2C-205ENST00000617209 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
SRGAP2C-205ENST00000617209 POLA1P09884 1462 aaPredicted RBP27.33■■□□□ 1.97
SRGAP2C-205ENST00000617209 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
SRGAP2C-205ENST00000617209 CUX1P39880 1505 aa27.31■■□□□ 1.96
SRGAP2C-205ENST00000617209 ZNF608Q9ULD9 1512 aaPredicted RBP27.29■■□□□ 1.96
SRGAP2C-205ENST00000617209 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
SRGAP2C-205ENST00000617209 SOGA1O94964 1423 aa27.24■■□□□ 1.95
SRGAP2C-205ENST00000617209 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
SRGAP2C-205ENST00000617209 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
SRGAP2C-205ENST00000617209 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.94
SRGAP2C-205ENST00000617209 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
SRGAP2C-205ENST00000617209 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
SRGAP2C-205ENST00000617209 OSCARQ8IYS5 282 aa27.09■■□□□ 1.93
SRGAP2C-205ENST00000617209 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
SRGAP2C-205ENST00000617209 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
SRGAP2C-205ENST00000617209 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
SRGAP2C-205ENST00000617209 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
SRGAP2C-205ENST00000617209 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
SRGAP2C-205ENST00000617209 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
SRGAP2C-205ENST00000617209 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
SRGAP2C-205ENST00000617209 MAGI1Q96QZ7 1491 aaPredicted RBP26.88■■□□□ 1.89
SRGAP2C-205ENST00000617209 ABCA5Q8WWZ7 1642 aa26.88■■□□□ 1.89
SRGAP2C-205ENST00000617209 CHD1O14646 1710 aa26.87■■□□□ 1.89
SRGAP2C-205ENST00000617209 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
SRGAP2C-205ENST00000617209 PBRM1Q86U86 1689 aa26.84■■□□□ 1.89
SRGAP2C-205ENST00000617209 FBLN2P98095 1184 aa26.81■■□□□ 1.88
SRGAP2C-205ENST00000617209 SYNJ2O15056 1496 aa26.77■■□□□ 1.88
SRGAP2C-205ENST00000617209 CHMP7Q8WUX9 453 aaPredicted RBP26.77■■□□□ 1.88
SRGAP2C-205ENST00000617209 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
SRGAP2C-205ENST00000617209 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
SRGAP2C-205ENST00000617209 ADAMTS12P58397 1594 aa26.61■■□□□ 1.85
SRGAP2C-205ENST00000617209 RIMBP3CA6NJZ7 1639 aa26.61■■□□□ 1.85
SRGAP2C-205ENST00000617209 RIMBP3BA6NNM3 1639 aa26.61■■□□□ 1.85
SRGAP2C-205ENST00000617209 RIMBP3Q9UFD9 1639 aa26.61■■□□□ 1.85
SRGAP2C-205ENST00000617209 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
SRGAP2C-205ENST00000617209 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
SRGAP2C-205ENST00000617209 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
SRGAP2C-205ENST00000617209 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
SRGAP2C-205ENST00000617209 IGF1RP08069 1367 aa26.49■■□□□ 1.83
SRGAP2C-205ENST00000617209 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
SRGAP2C-205ENST00000617209 NUP160Q12769 1436 aa26.48■■□□□ 1.83
SRGAP2C-205ENST00000617209 CEP170Q5SW79 1584 aa26.42■■□□□ 1.82
SRGAP2C-205ENST00000617209 CUL7Q14999 1698 aa26.41■■□□□ 1.82
SRGAP2C-205ENST00000617209 CYB5RLQ6IPT4 315 aa26.36■■□□□ 1.81
SRGAP2C-205ENST00000617209 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
SRGAP2C-205ENST00000617209 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
SRGAP2C-205ENST00000617209 SHROOM2Q13796 1616 aa26.3■■□□□ 1.8
SRGAP2C-205ENST00000617209 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
SRGAP2C-205ENST00000617209 JPH4Q96JJ6 628 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms