RNA–Protein interactions for RNA: ENST00000617208.1

PHLDB1-226, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 3

Gene PHLDB1, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-226ENST00000617208 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
PHLDB1-226ENST00000617208 ABCC9O60706 1549 aa21.5■■□□□ 1.03
PHLDB1-226ENST00000617208 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
PHLDB1-226ENST00000617208 CCDC180Q9P1Z9 1646 aa20.64■□□□□ 0.9
PHLDB1-226ENST00000617208 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
PHLDB1-226ENST00000617208 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
PHLDB1-226ENST00000617208 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
PHLDB1-226ENST00000617208 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
PHLDB1-226ENST00000617208 NACADO15069 1562 aa19.66■□□□□ 0.74
PHLDB1-226ENST00000617208 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
PHLDB1-226ENST00000617208 DNAJC5Q9H3Z4 198 aa19.39■□□□□ 0.69
PHLDB1-226ENST00000617208 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
PHLDB1-226ENST00000617208 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
PHLDB1-226ENST00000617208 EIF4G1Q04637 1599 aaKnown RBP19.08■□□□□ 0.65
PHLDB1-226ENST00000617208 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
PHLDB1-226ENST00000617208 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
PHLDB1-226ENST00000617208 SHROOM4Q9ULL8 1493 aa18.9■□□□□ 0.62
PHLDB1-226ENST00000617208 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
PHLDB1-226ENST00000617208 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
PHLDB1-226ENST00000617208 CUX2O14529 1486 aa18.55■□□□□ 0.56
PHLDB1-226ENST00000617208 ERCC6Q03468 1493 aa18.52■□□□□ 0.55
PHLDB1-226ENST00000617208 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
PHLDB1-226ENST00000617208 NESP48681 1621 aa18.34■□□□□ 0.53
PHLDB1-226ENST00000617208 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
PHLDB1-226ENST00000617208 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
PHLDB1-226ENST00000617208 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
PHLDB1-226ENST00000617208 SMARCA2P51531 1590 aa18.08■□□□□ 0.49
PHLDB1-226ENST00000617208 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
PHLDB1-226ENST00000617208 HMGXB3Q12766 1538 aa17.97■□□□□ 0.47
PHLDB1-226ENST00000617208 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
PHLDB1-226ENST00000617208 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
PHLDB1-226ENST00000617208 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
PHLDB1-226ENST00000617208 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
PHLDB1-226ENST00000617208 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
PHLDB1-226ENST00000617208 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
PHLDB1-226ENST00000617208 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
PHLDB1-226ENST00000617208 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
PHLDB1-226ENST00000617208 WDR62O43379 1518 aa17.68■□□□□ 0.42
PHLDB1-226ENST00000617208 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
PHLDB1-226ENST00000617208 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PHLDB1-226ENST00000617208 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
PHLDB1-226ENST00000617208 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
PHLDB1-226ENST00000617208 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
PHLDB1-226ENST00000617208 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
PHLDB1-226ENST00000617208 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
PHLDB1-226ENST00000617208 WIZO95785 1651 aa17.49■□□□□ 0.39
PHLDB1-226ENST00000617208 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
PHLDB1-226ENST00000617208 CYB5RLQ6IPT4 315 aa17.48■□□□□ 0.39
PHLDB1-226ENST00000617208 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
PHLDB1-226ENST00000617208 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
PHLDB1-226ENST00000617208 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
PHLDB1-226ENST00000617208 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
PHLDB1-226ENST00000617208 CFTRP13569 1480 aa17.31■□□□□ 0.36
PHLDB1-226ENST00000617208 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
PHLDB1-226ENST00000617208 CHD1O14646 1710 aa17.23■□□□□ 0.35
PHLDB1-226ENST00000617208 FBLN2P98095 1184 aa17.21■□□□□ 0.35
PHLDB1-226ENST00000617208 EIF4G3O43432 1585 aaKnown RBP17.17■□□□□ 0.34
PHLDB1-226ENST00000617208 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
PHLDB1-226ENST00000617208 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.34
PHLDB1-226ENST00000617208 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
PHLDB1-226ENST00000617208 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
PHLDB1-226ENST00000617208 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
PHLDB1-226ENST00000617208 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
PHLDB1-226ENST00000617208 TARBP1Q13395 1621 aaKnown RBP17■□□□□ 0.31
PHLDB1-226ENST00000617208 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
PHLDB1-226ENST00000617208 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
PHLDB1-226ENST00000617208 TDRD9Q8NDG6 1382 aaKnown RBP16.95■□□□□ 0.3
PHLDB1-226ENST00000617208 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
PHLDB1-226ENST00000617208 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
PHLDB1-226ENST00000617208 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PHLDB1-226ENST00000617208 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
PHLDB1-226ENST00000617208 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
PHLDB1-226ENST00000617208 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
PHLDB1-226ENST00000617208 SOGA1O94964 1423 aa16.82■□□□□ 0.28
PHLDB1-226ENST00000617208 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
PHLDB1-226ENST00000617208 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
PHLDB1-226ENST00000617208 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
PHLDB1-226ENST00000617208 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
PHLDB1-226ENST00000617208 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
PHLDB1-226ENST00000617208 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
PHLDB1-226ENST00000617208 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
PHLDB1-226ENST00000617208 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
PHLDB1-226ENST00000617208 KIF13AQ9H1H9 1805 aa16.67■□□□□ 0.26
PHLDB1-226ENST00000617208 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
PHLDB1-226ENST00000617208 CUX1P39880 1505 aa16.63■□□□□ 0.25
PHLDB1-226ENST00000617208 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
PHLDB1-226ENST00000617208 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
PHLDB1-226ENST00000617208 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
PHLDB1-226ENST00000617208 FAM69CQ0P6D2 419 aa16.52■□□□□ 0.24
PHLDB1-226ENST00000617208 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
PHLDB1-226ENST00000617208 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
PHLDB1-226ENST00000617208 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
PHLDB1-226ENST00000617208 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
PHLDB1-226ENST00000617208 NUP160Q12769 1436 aa16.42■□□□□ 0.22
PHLDB1-226ENST00000617208 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
PHLDB1-226ENST00000617208 ADAMTS12P58397 1594 aa16.41■□□□□ 0.22
PHLDB1-226ENST00000617208 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
PHLDB1-226ENST00000617208 KDM6BO15054 1643 aa16.39■□□□□ 0.21
PHLDB1-226ENST00000617208 ABCC10Q5T3U5 1492 aa16.39■□□□□ 0.21
PHLDB1-226ENST00000617208 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms