RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
CBWD1-225ENST00000616944 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
CBWD1-225ENST00000616944 ABCC9O60706 1549 aa29.87■■■□□ 2.37
CBWD1-225ENST00000616944 ZCCHC6Q5VYS8 1495 aaKnown RBP29.86■■■□□ 2.37
CBWD1-225ENST00000616944 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
CBWD1-225ENST00000616944 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
CBWD1-225ENST00000616944 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
CBWD1-225ENST00000616944 NACADO15069 1562 aa29.23■■■□□ 2.27
CBWD1-225ENST00000616944 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
CBWD1-225ENST00000616944 SCRIBQ14160 1630 aa28.64■■■□□ 2.18
CBWD1-225ENST00000616944 UNC13AQ9UPW8 1703 aa28.58■■■□□ 2.17
CBWD1-225ENST00000616944 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
CBWD1-225ENST00000616944 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
CBWD1-225ENST00000616944 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
CBWD1-225ENST00000616944 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
CBWD1-225ENST00000616944 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
CBWD1-225ENST00000616944 SMARCA4P51532 1647 aa27.49■■□□□ 1.99
CBWD1-225ENST00000616944 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
CBWD1-225ENST00000616944 RSF1Q96T23 1441 aaPredicted RBP27.41■■□□□ 1.98
CBWD1-225ENST00000616944 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
CBWD1-225ENST00000616944 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
CBWD1-225ENST00000616944 WIZO95785 1651 aa27.25■■□□□ 1.95
CBWD1-225ENST00000616944 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
CBWD1-225ENST00000616944 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
CBWD1-225ENST00000616944 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
CBWD1-225ENST00000616944 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
CBWD1-225ENST00000616944 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.92
CBWD1-225ENST00000616944 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
CBWD1-225ENST00000616944 NCAPD3P42695 1498 aa26.95■■□□□ 1.9
CBWD1-225ENST00000616944 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
CBWD1-225ENST00000616944 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
CBWD1-225ENST00000616944 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
CBWD1-225ENST00000616944 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
CBWD1-225ENST00000616944 CFTRP13569 1480 aa26.23■■□□□ 1.79
CBWD1-225ENST00000616944 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
CBWD1-225ENST00000616944 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.77
CBWD1-225ENST00000616944 NESP48681 1621 aa26.08■■□□□ 1.77
CBWD1-225ENST00000616944 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
CBWD1-225ENST00000616944 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
CBWD1-225ENST00000616944 FANCD2Q9BXW9 1451 aa25.89■■□□□ 1.74
CBWD1-225ENST00000616944 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
CBWD1-225ENST00000616944 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
CBWD1-225ENST00000616944 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
CBWD1-225ENST00000616944 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
CBWD1-225ENST00000616944 SYNJ1O43426 1573 aa25.77■■□□□ 1.72
CBWD1-225ENST00000616944 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
CBWD1-225ENST00000616944 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
CBWD1-225ENST00000616944 CUX1P39880 1505 aa25.72■■□□□ 1.71
CBWD1-225ENST00000616944 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
CBWD1-225ENST00000616944 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
CBWD1-225ENST00000616944 TRIM41Q8WV44 630 aa25.64■■□□□ 1.7
CBWD1-225ENST00000616944 URB2Q14146 1524 aaKnown RBP25.62■■□□□ 1.69
CBWD1-225ENST00000616944 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
CBWD1-225ENST00000616944 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
CBWD1-225ENST00000616944 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
CBWD1-225ENST00000616944 WDR62O43379 1518 aa25.52■■□□□ 1.68
CBWD1-225ENST00000616944 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
CBWD1-225ENST00000616944 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
CBWD1-225ENST00000616944 CUX2O14529 1486 aa25.37■■□□□ 1.65
CBWD1-225ENST00000616944 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
CBWD1-225ENST00000616944 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
CBWD1-225ENST00000616944 SOGA1O94964 1423 aa25.31■■□□□ 1.64
CBWD1-225ENST00000616944 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
CBWD1-225ENST00000616944 ABCA10Q8WWZ4 1543 aa25.28■■□□□ 1.64
CBWD1-225ENST00000616944 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
CBWD1-225ENST00000616944 EEA1Q15075 1411 aa25.22■■□□□ 1.63
CBWD1-225ENST00000616944 IFT140Q96RY7 1462 aa25.2■■□□□ 1.62
CBWD1-225ENST00000616944 ABCA5Q8WWZ7 1642 aa25.17■■□□□ 1.62
CBWD1-225ENST00000616944 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
CBWD1-225ENST00000616944 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
CBWD1-225ENST00000616944 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
CBWD1-225ENST00000616944 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
CBWD1-225ENST00000616944 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
CBWD1-225ENST00000616944 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
CBWD1-225ENST00000616944 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
CBWD1-225ENST00000616944 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
CBWD1-225ENST00000616944 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
CBWD1-225ENST00000616944 KIF21BO75037 1637 aa24.99■■□□□ 1.59
CBWD1-225ENST00000616944 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.59
CBWD1-225ENST00000616944 IGF1RP08069 1367 aa24.98■■□□□ 1.59
CBWD1-225ENST00000616944 CUL7Q14999 1698 aa24.95■■□□□ 1.58
CBWD1-225ENST00000616944 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
CBWD1-225ENST00000616944 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
CBWD1-225ENST00000616944 ADAMTS12P58397 1594 aa24.85■■□□□ 1.57
CBWD1-225ENST00000616944 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
CBWD1-225ENST00000616944 RAPGEF2Q9Y4G8 1499 aa24.84■■□□□ 1.57
CBWD1-225ENST00000616944 CARMIL1Q5VZK9 1371 aa24.82■■□□□ 1.56
CBWD1-225ENST00000616944 LOC105371045A0A1W2PR82 267 aa24.82■■□□□ 1.56
CBWD1-225ENST00000616944 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
CBWD1-225ENST00000616944 MAGI1Q96QZ7 1491 aaPredicted RBP24.78■■□□□ 1.56
CBWD1-225ENST00000616944 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
CBWD1-225ENST00000616944 EHMT2Q96KQ7 1210 aa24.69■■□□□ 1.54
CBWD1-225ENST00000616944 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
CBWD1-225ENST00000616944 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
CBWD1-225ENST00000616944 CTTNBP2Q8WZ74 1663 aa24.65■■□□□ 1.54
CBWD1-225ENST00000616944 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
CBWD1-225ENST00000616944 CHD1O14646 1710 aa24.61■■□□□ 1.53
CBWD1-225ENST00000616944 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
CBWD1-225ENST00000616944 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
CBWD1-225ENST00000616944 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms