RNA–Protein interactions for RNA: ENST00000616880.1

CCL17-202, Transcript of C-C motif chemokine ligand 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL17, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL17-202ENST00000616880 NISCHQ9Y2I1 1504 aa24.45■■□□□ 1.51
CCL17-202ENST00000616880 ABCC9O60706 1549 aa22.11■■□□□ 1.13
CCL17-202ENST00000616880 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
CCL17-202ENST00000616880 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
CCL17-202ENST00000616880 RB1CC1Q8TDY2 1594 aa20.99■□□□□ 0.95
CCL17-202ENST00000616880 NACADO15069 1562 aa20.84■□□□□ 0.93
CCL17-202ENST00000616880 DCAF8L2P0C7V8 631 aa20.75■□□□□ 0.91
CCL17-202ENST00000616880 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCL17-202ENST00000616880 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
CCL17-202ENST00000616880 UNC13AQ9UPW8 1703 aa20.39■□□□□ 0.86
CCL17-202ENST00000616880 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
CCL17-202ENST00000616880 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
CCL17-202ENST00000616880 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
CCL17-202ENST00000616880 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
CCL17-202ENST00000616880 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
CCL17-202ENST00000616880 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
CCL17-202ENST00000616880 DNAJC5Q9H3Z4 198 aa19.95■□□□□ 0.78
CCL17-202ENST00000616880 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
CCL17-202ENST00000616880 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
CCL17-202ENST00000616880 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
CCL17-202ENST00000616880 ATAD2BQ9ULI0 1458 aa19.18■□□□□ 0.66
CCL17-202ENST00000616880 CUX2O14529 1486 aa19.16■□□□□ 0.66
CCL17-202ENST00000616880 ERCC6Q03468 1493 aa19.11■□□□□ 0.65
CCL17-202ENST00000616880 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
CCL17-202ENST00000616880 HMGXB3Q12766 1538 aa19.06■□□□□ 0.64
CCL17-202ENST00000616880 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
CCL17-202ENST00000616880 BAZ1AQ9NRL2 1556 aaPredicted RBP18.98■□□□□ 0.63
CCL17-202ENST00000616880 NESP48681 1621 aa18.95■□□□□ 0.62
CCL17-202ENST00000616880 BAZ1BQ9UIG0 1483 aaKnown RBP18.95■□□□□ 0.62
CCL17-202ENST00000616880 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
CCL17-202ENST00000616880 MROH2BQ7Z745 1585 aa18.82■□□□□ 0.6
CCL17-202ENST00000616880 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
CCL17-202ENST00000616880 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.6
CCL17-202ENST00000616880 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
CCL17-202ENST00000616880 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
CCL17-202ENST00000616880 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
CCL17-202ENST00000616880 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
CCL17-202ENST00000616880 MRC2Q9UBG0 1479 aa18.56■□□□□ 0.56
CCL17-202ENST00000616880 WIZO95785 1651 aa18.53■□□□□ 0.56
CCL17-202ENST00000616880 WDR62O43379 1518 aa18.5■□□□□ 0.55
CCL17-202ENST00000616880 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
CCL17-202ENST00000616880 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
CCL17-202ENST00000616880 CFTRP13569 1480 aa18.43■□□□□ 0.54
CCL17-202ENST00000616880 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
CCL17-202ENST00000616880 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
CCL17-202ENST00000616880 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
CCL17-202ENST00000616880 URB2Q14146 1524 aaKnown RBP18.28■□□□□ 0.52
CCL17-202ENST00000616880 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
CCL17-202ENST00000616880 IFT140Q96RY7 1462 aa18.13■□□□□ 0.49
CCL17-202ENST00000616880 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
CCL17-202ENST00000616880 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
CCL17-202ENST00000616880 TOPBP1Q92547 1522 aa18.06■□□□□ 0.48
CCL17-202ENST00000616880 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
CCL17-202ENST00000616880 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
CCL17-202ENST00000616880 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
CCL17-202ENST00000616880 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
CCL17-202ENST00000616880 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.46
CCL17-202ENST00000616880 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
CCL17-202ENST00000616880 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCL17-202ENST00000616880 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
CCL17-202ENST00000616880 EIF4G3O43432 1585 aaKnown RBP17.89■□□□□ 0.45
CCL17-202ENST00000616880 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
CCL17-202ENST00000616880 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
CCL17-202ENST00000616880 FBLN2P98095 1184 aa17.86■□□□□ 0.45
CCL17-202ENST00000616880 SOGA1O94964 1423 aa17.83■□□□□ 0.45
CCL17-202ENST00000616880 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
CCL17-202ENST00000616880 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
CCL17-202ENST00000616880 CHD1O14646 1710 aa17.76■□□□□ 0.43
CCL17-202ENST00000616880 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
CCL17-202ENST00000616880 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
CCL17-202ENST00000616880 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
CCL17-202ENST00000616880 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
CCL17-202ENST00000616880 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
CCL17-202ENST00000616880 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
CCL17-202ENST00000616880 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
CCL17-202ENST00000616880 MAGI1Q96QZ7 1491 aaPredicted RBP17.69■□□□□ 0.42
CCL17-202ENST00000616880 CUX1P39880 1505 aa17.67■□□□□ 0.42
CCL17-202ENST00000616880 GRIN2BQ13224 1484 aa17.67■□□□□ 0.42
CCL17-202ENST00000616880 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
CCL17-202ENST00000616880 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
CCL17-202ENST00000616880 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
CCL17-202ENST00000616880 GAPVD1Q14C86 1478 aa17.58■□□□□ 0.41
CCL17-202ENST00000616880 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
CCL17-202ENST00000616880 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
CCL17-202ENST00000616880 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
CCL17-202ENST00000616880 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
CCL17-202ENST00000616880 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
CCL17-202ENST00000616880 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
CCL17-202ENST00000616880 NUP160Q12769 1436 aa17.4■□□□□ 0.38
CCL17-202ENST00000616880 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
CCL17-202ENST00000616880 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
CCL17-202ENST00000616880 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
CCL17-202ENST00000616880 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
CCL17-202ENST00000616880 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
CCL17-202ENST00000616880 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
CCL17-202ENST00000616880 ERICH3Q5RHP9 1530 aa17.31■□□□□ 0.36
CCL17-202ENST00000616880 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
CCL17-202ENST00000616880 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
CCL17-202ENST00000616880 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
CCL17-202ENST00000616880 ILDR1Q86SU0 546 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms