RNA–Protein interactions for RNA: ENST00000616590.4

GRIA3-206, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 2 BASIC

Gene GRIA3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-206ENST00000616590 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
GRIA3-206ENST00000616590 AEBP2Q6ZN18 517 aaPredicted RBP21.61■■□□□ 1.05
GRIA3-206ENST00000616590 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
GRIA3-206ENST00000616590 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
GRIA3-206ENST00000616590 ABCC9O60706 1549 aa20.03■□□□□ 0.8
GRIA3-206ENST00000616590 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
GRIA3-206ENST00000616590 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
GRIA3-206ENST00000616590 NACADO15069 1562 aa19.07■□□□□ 0.64
GRIA3-206ENST00000616590 ZCCHC6Q5VYS8 1495 aaKnown RBP19.01■□□□□ 0.63
GRIA3-206ENST00000616590 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
GRIA3-206ENST00000616590 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
GRIA3-206ENST00000616590 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
GRIA3-206ENST00000616590 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
GRIA3-206ENST00000616590 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
GRIA3-206ENST00000616590 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
GRIA3-206ENST00000616590 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
GRIA3-206ENST00000616590 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
GRIA3-206ENST00000616590 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
GRIA3-206ENST00000616590 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
GRIA3-206ENST00000616590 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.49
GRIA3-206ENST00000616590 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
GRIA3-206ENST00000616590 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
GRIA3-206ENST00000616590 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
GRIA3-206ENST00000616590 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
GRIA3-206ENST00000616590 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
GRIA3-206ENST00000616590 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
GRIA3-206ENST00000616590 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
GRIA3-206ENST00000616590 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
GRIA3-206ENST00000616590 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
GRIA3-206ENST00000616590 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
GRIA3-206ENST00000616590 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
GRIA3-206ENST00000616590 WIZO95785 1651 aa17.48■□□□□ 0.39
GRIA3-206ENST00000616590 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
GRIA3-206ENST00000616590 NESP48681 1621 aa17.32■□□□□ 0.36
GRIA3-206ENST00000616590 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
GRIA3-206ENST00000616590 TOP2AP11388 1531 aaKnown RBP17.23■□□□□ 0.35
GRIA3-206ENST00000616590 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
GRIA3-206ENST00000616590 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
GRIA3-206ENST00000616590 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
GRIA3-206ENST00000616590 LAMC3Q9Y6N6 1575 aa17.15■□□□□ 0.34
GRIA3-206ENST00000616590 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
GRIA3-206ENST00000616590 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
GRIA3-206ENST00000616590 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
GRIA3-206ENST00000616590 CFTRP13569 1480 aa17.02■□□□□ 0.32
GRIA3-206ENST00000616590 FOXD1Q16676 465 aa16.98■□□□□ 0.31
GRIA3-206ENST00000616590 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
GRIA3-206ENST00000616590 CUX2O14529 1486 aa16.96■□□□□ 0.31
GRIA3-206ENST00000616590 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
GRIA3-206ENST00000616590 CEP164Q9UPV0 1460 aa16.93■□□□□ 0.3
GRIA3-206ENST00000616590 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
GRIA3-206ENST00000616590 WDR62O43379 1518 aa16.81■□□□□ 0.28
GRIA3-206ENST00000616590 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
GRIA3-206ENST00000616590 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
GRIA3-206ENST00000616590 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
GRIA3-206ENST00000616590 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
GRIA3-206ENST00000616590 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
GRIA3-206ENST00000616590 CUX1P39880 1505 aa16.57■□□□□ 0.24
GRIA3-206ENST00000616590 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
GRIA3-206ENST00000616590 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
GRIA3-206ENST00000616590 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
GRIA3-206ENST00000616590 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
GRIA3-206ENST00000616590 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
GRIA3-206ENST00000616590 FGD5Q6ZNL6 1462 aa16.52■□□□□ 0.23
GRIA3-206ENST00000616590 SOGA1O94964 1423 aa16.52■□□□□ 0.23
GRIA3-206ENST00000616590 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
GRIA3-206ENST00000616590 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
GRIA3-206ENST00000616590 TARBP1Q13395 1621 aaKnown RBP16.48■□□□□ 0.23
GRIA3-206ENST00000616590 ADRA2BP18089 450 aa16.46■□□□□ 0.23
GRIA3-206ENST00000616590 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
GRIA3-206ENST00000616590 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
GRIA3-206ENST00000616590 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
GRIA3-206ENST00000616590 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
GRIA3-206ENST00000616590 FBLN2P98095 1184 aa16.39■□□□□ 0.21
GRIA3-206ENST00000616590 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
GRIA3-206ENST00000616590 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
GRIA3-206ENST00000616590 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
GRIA3-206ENST00000616590 ABCA10Q8WWZ4 1543 aa16.3■□□□□ 0.2
GRIA3-206ENST00000616590 WDR97A6NE52 1622 aa16.3■□□□□ 0.2
GRIA3-206ENST00000616590 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
GRIA3-206ENST00000616590 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
GRIA3-206ENST00000616590 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
GRIA3-206ENST00000616590 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
GRIA3-206ENST00000616590 CHD1O14646 1710 aa16.24■□□□□ 0.19
GRIA3-206ENST00000616590 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
GRIA3-206ENST00000616590 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
GRIA3-206ENST00000616590 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
GRIA3-206ENST00000616590 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
GRIA3-206ENST00000616590 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
GRIA3-206ENST00000616590 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
GRIA3-206ENST00000616590 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
GRIA3-206ENST00000616590 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
GRIA3-206ENST00000616590 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
GRIA3-206ENST00000616590 PIAS4Q8N2W9 510 aaPredicted RBP16.07■□□□□ 0.16
GRIA3-206ENST00000616590 IGF1RP08069 1367 aa16.07■□□□□ 0.16
GRIA3-206ENST00000616590 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
GRIA3-206ENST00000616590 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
GRIA3-206ENST00000616590 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
GRIA3-206ENST00000616590 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
GRIA3-206ENST00000616590 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
GRIA3-206ENST00000616590 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms