RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 NISCHQ9Y2I1 1504 aa27.25■■□□□ 1.95
TARDBP-217ENST00000616545 CCDC180Q9P1Z9 1646 aa24.01■■□□□ 1.43
TARDBP-217ENST00000616545 ABCC9O60706 1549 aa22.91■■□□□ 1.26
TARDBP-217ENST00000616545 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
TARDBP-217ENST00000616545 DCAF1Q9Y4B6 1507 aa22.65■■□□□ 1.22
TARDBP-217ENST00000616545 MYO15BQ96JP2 1530 aa22.58■■□□□ 1.21
TARDBP-217ENST00000616545 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
TARDBP-217ENST00000616545 NACADO15069 1562 aa22.49■■□□□ 1.19
TARDBP-217ENST00000616545 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
TARDBP-217ENST00000616545 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
TARDBP-217ENST00000616545 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
TARDBP-217ENST00000616545 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
TARDBP-217ENST00000616545 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
TARDBP-217ENST00000616545 PABPN1Q86U42 306 aaKnown RBP eCLIP21.49■■□□□ 1.03
TARDBP-217ENST00000616545 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
TARDBP-217ENST00000616545 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
TARDBP-217ENST00000616545 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
TARDBP-217ENST00000616545 SMARCA4P51532 1647 aa21■□□□□ 0.95
TARDBP-217ENST00000616545 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
TARDBP-217ENST00000616545 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
TARDBP-217ENST00000616545 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
TARDBP-217ENST00000616545 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
TARDBP-217ENST00000616545 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
TARDBP-217ENST00000616545 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
TARDBP-217ENST00000616545 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
TARDBP-217ENST00000616545 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
TARDBP-217ENST00000616545 WIZO95785 1651 aa20.72■□□□□ 0.91
TARDBP-217ENST00000616545 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
TARDBP-217ENST00000616545 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
TARDBP-217ENST00000616545 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
TARDBP-217ENST00000616545 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
TARDBP-217ENST00000616545 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
TARDBP-217ENST00000616545 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
TARDBP-217ENST00000616545 CFTRP13569 1480 aa20.13■□□□□ 0.81
TARDBP-217ENST00000616545 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
TARDBP-217ENST00000616545 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
TARDBP-217ENST00000616545 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
TARDBP-217ENST00000616545 NESP48681 1621 aa19.94■□□□□ 0.78
TARDBP-217ENST00000616545 FANCD2Q9BXW9 1451 aa19.88■□□□□ 0.77
TARDBP-217ENST00000616545 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
TARDBP-217ENST00000616545 ERCC6Q03468 1493 aa19.76■□□□□ 0.75
TARDBP-217ENST00000616545 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
TARDBP-217ENST00000616545 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
TARDBP-217ENST00000616545 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
TARDBP-217ENST00000616545 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
TARDBP-217ENST00000616545 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
TARDBP-217ENST00000616545 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
TARDBP-217ENST00000616545 DNMBPQ6XZF7 1577 aa19.65■□□□□ 0.74
TARDBP-217ENST00000616545 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
TARDBP-217ENST00000616545 CUX1P39880 1505 aa19.63■□□□□ 0.73
TARDBP-217ENST00000616545 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
TARDBP-217ENST00000616545 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
TARDBP-217ENST00000616545 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
TARDBP-217ENST00000616545 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
TARDBP-217ENST00000616545 WDR62O43379 1518 aa19.6■□□□□ 0.73
TARDBP-217ENST00000616545 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
TARDBP-217ENST00000616545 FGD5Q6ZNL6 1462 aa19.5■□□□□ 0.71
TARDBP-217ENST00000616545 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
TARDBP-217ENST00000616545 SOGA1O94964 1423 aa19.44■□□□□ 0.7
TARDBP-217ENST00000616545 CUX2O14529 1486 aa19.42■□□□□ 0.7
TARDBP-217ENST00000616545 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
TARDBP-217ENST00000616545 ABCA10Q8WWZ4 1543 aa19.39■□□□□ 0.69
TARDBP-217ENST00000616545 EEA1Q15075 1411 aa19.37■□□□□ 0.69
TARDBP-217ENST00000616545 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
TARDBP-217ENST00000616545 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
TARDBP-217ENST00000616545 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
TARDBP-217ENST00000616545 WDR97A6NE52 1622 aa19.33■□□□□ 0.69
TARDBP-217ENST00000616545 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
TARDBP-217ENST00000616545 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
TARDBP-217ENST00000616545 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
TARDBP-217ENST00000616545 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
TARDBP-217ENST00000616545 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
TARDBP-217ENST00000616545 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
TARDBP-217ENST00000616545 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
TARDBP-217ENST00000616545 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.662e-7■■□□□ 14.3
TARDBP-217ENST00000616545 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
TARDBP-217ENST00000616545 IGF1RP08069 1367 aa19.16■□□□□ 0.66
TARDBP-217ENST00000616545 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
TARDBP-217ENST00000616545 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
TARDBP-217ENST00000616545 CUL7Q14999 1698 aa19.08■□□□□ 0.65
TARDBP-217ENST00000616545 MAGI1Q96QZ7 1491 aaPredicted RBP19.08■□□□□ 0.64
TARDBP-217ENST00000616545 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
TARDBP-217ENST00000616545 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
TARDBP-217ENST00000616545 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
TARDBP-217ENST00000616545 FHAD1B1AJZ9 1412 aa19.05■□□□□ 0.64
TARDBP-217ENST00000616545 KIF21BO75037 1637 aa19.03■□□□□ 0.64
TARDBP-217ENST00000616545 RAPGEF2Q9Y4G8 1499 aa19.02■□□□□ 0.63
TARDBP-217ENST00000616545 SNAPC4Q5SXM2 1469 aa19.01■□□□□ 0.63
TARDBP-217ENST00000616545 ADAMTS12P58397 1594 aa18.99■□□□□ 0.63
TARDBP-217ENST00000616545 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
TARDBP-217ENST00000616545 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
TARDBP-217ENST00000616545 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
TARDBP-217ENST00000616545 GRIN2AQ12879 1464 aa18.9■□□□□ 0.62
TARDBP-217ENST00000616545 UBTFP17480 764 aaKnown RBP18.87■□□□□ 0.61
TARDBP-217ENST00000616545 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
TARDBP-217ENST00000616545 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
TARDBP-217ENST00000616545 FBLN2P98095 1184 aa18.84■□□□□ 0.61
TARDBP-217ENST00000616545 NUP160Q12769 1436 aa18.81■□□□□ 0.6
TARDBP-217ENST00000616545 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
TARDBP-217ENST00000616545 CHD1O14646 1710 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms