RNA–Protein interactions for RNA: ENST00000616474.1

CCL18-202, Transcript of C-C motif chemokine ligand 18, humanhuman

TSL 2

Gene CCL18, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18-202ENST00000616474 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
CCL18-202ENST00000616474 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
CCL18-202ENST00000616474 ABCC9O60706 1549 aa29.57■■■□□ 2.32
CCL18-202ENST00000616474 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
CCL18-202ENST00000616474 NACADO15069 1562 aa28.35■■■□□ 2.13
CCL18-202ENST00000616474 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
CCL18-202ENST00000616474 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
CCL18-202ENST00000616474 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
CCL18-202ENST00000616474 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
CCL18-202ENST00000616474 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
CCL18-202ENST00000616474 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
CCL18-202ENST00000616474 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
CCL18-202ENST00000616474 SCRIBQ14160 1630 aa27.47■■□□□ 1.99
CCL18-202ENST00000616474 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
CCL18-202ENST00000616474 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
CCL18-202ENST00000616474 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
CCL18-202ENST00000616474 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
CCL18-202ENST00000616474 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
CCL18-202ENST00000616474 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
CCL18-202ENST00000616474 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
CCL18-202ENST00000616474 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
CCL18-202ENST00000616474 ATAD2BQ9ULI0 1458 aa26.17■■□□□ 1.78
CCL18-202ENST00000616474 SMARCA2P51531 1590 aa26.12■■□□□ 1.77
CCL18-202ENST00000616474 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
CCL18-202ENST00000616474 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
CCL18-202ENST00000616474 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
CCL18-202ENST00000616474 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
CCL18-202ENST00000616474 WIZO95785 1651 aa25.8■■□□□ 1.72
CCL18-202ENST00000616474 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
CCL18-202ENST00000616474 NESP48681 1621 aa25.59■■□□□ 1.69
CCL18-202ENST00000616474 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
CCL18-202ENST00000616474 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
CCL18-202ENST00000616474 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
CCL18-202ENST00000616474 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
CCL18-202ENST00000616474 PDS5BQ9NTI5 1447 aa25.31■■□□□ 1.64
CCL18-202ENST00000616474 CUX2O14529 1486 aa25.26■■□□□ 1.63
CCL18-202ENST00000616474 CFTRP13569 1480 aa25.25■■□□□ 1.63
CCL18-202ENST00000616474 KIF21AQ7Z4S6 1674 aa25.24■■□□□ 1.63
CCL18-202ENST00000616474 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
CCL18-202ENST00000616474 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
CCL18-202ENST00000616474 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
CCL18-202ENST00000616474 MRC2Q9UBG0 1479 aa25.06■■□□□ 1.6
CCL18-202ENST00000616474 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
CCL18-202ENST00000616474 SUPT5HO00267 1087 aaKnown RBP25.02■■□□□ 1.6
CCL18-202ENST00000616474 WDR62O43379 1518 aa24.99■■□□□ 1.59
CCL18-202ENST00000616474 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
CCL18-202ENST00000616474 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
CCL18-202ENST00000616474 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
CCL18-202ENST00000616474 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
CCL18-202ENST00000616474 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
CCL18-202ENST00000616474 DNAJC5Q9H3Z4 198 aa24.63■■□□□ 1.53
CCL18-202ENST00000616474 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
CCL18-202ENST00000616474 POLA1P09884 1462 aaPredicted RBP24.49■■□□□ 1.51
CCL18-202ENST00000616474 CUX1P39880 1505 aa24.49■■□□□ 1.51
CCL18-202ENST00000616474 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
CCL18-202ENST00000616474 TARBP1Q13395 1621 aaKnown RBP24.45■■□□□ 1.5
CCL18-202ENST00000616474 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
CCL18-202ENST00000616474 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
CCL18-202ENST00000616474 SOGA1O94964 1423 aa24.38■■□□□ 1.49
CCL18-202ENST00000616474 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
CCL18-202ENST00000616474 AQRO60306 1485 aaKnown RBP eCLIP24.32■■□□□ 1.48
CCL18-202ENST00000616474 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
CCL18-202ENST00000616474 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
CCL18-202ENST00000616474 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
CCL18-202ENST00000616474 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
CCL18-202ENST00000616474 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
CCL18-202ENST00000616474 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
CCL18-202ENST00000616474 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
CCL18-202ENST00000616474 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
CCL18-202ENST00000616474 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
CCL18-202ENST00000616474 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
CCL18-202ENST00000616474 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
CCL18-202ENST00000616474 SNAPC4Q5SXM2 1469 aa24.07■■□□□ 1.44
CCL18-202ENST00000616474 CHD1O14646 1710 aa24.05■■□□□ 1.44
CCL18-202ENST00000616474 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
CCL18-202ENST00000616474 PBRM1Q86U86 1689 aa24.02■■□□□ 1.44
CCL18-202ENST00000616474 FBLN2P98095 1184 aa24.01■■□□□ 1.43
CCL18-202ENST00000616474 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
CCL18-202ENST00000616474 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
CCL18-202ENST00000616474 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
CCL18-202ENST00000616474 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
CCL18-202ENST00000616474 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
CCL18-202ENST00000616474 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
CCL18-202ENST00000616474 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
CCL18-202ENST00000616474 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
CCL18-202ENST00000616474 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
CCL18-202ENST00000616474 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
CCL18-202ENST00000616474 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
CCL18-202ENST00000616474 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
CCL18-202ENST00000616474 TRIM41Q8WV44 630 aa23.73■■□□□ 1.39
CCL18-202ENST00000616474 IGF1RP08069 1367 aa23.73■■□□□ 1.39
CCL18-202ENST00000616474 NUP160Q12769 1436 aa23.71■■□□□ 1.39
CCL18-202ENST00000616474 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
CCL18-202ENST00000616474 CUL7Q14999 1698 aa23.62■■□□□ 1.37
CCL18-202ENST00000616474 ARAP1Q96P48 1450 aa23.62■■□□□ 1.37
CCL18-202ENST00000616474 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
CCL18-202ENST00000616474 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.36
CCL18-202ENST00000616474 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
CCL18-202ENST00000616474 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
CCL18-202ENST00000616474 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms