RNA–Protein interactions for RNA: ENST00000616333.1

LINC01742-201, Transcript of long intergenic non-protein coding RNA 1742, humanhuman

TSL 3 BASIC

Gene LINC01742, Length 628 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01742-201ENST00000616333 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
LINC01742-201ENST00000616333 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
LINC01742-201ENST00000616333 ABCC9O60706 1549 aa15.43■□□□□ 0.06
LINC01742-201ENST00000616333 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
LINC01742-201ENST00000616333 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
LINC01742-201ENST00000616333 DCAF1Q9Y4B6 1507 aa15.28■□□□□ 0.04
LINC01742-201ENST00000616333 NACADO15069 1562 aa15.19■□□□□ 0.02
LINC01742-201ENST00000616333 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
LINC01742-201ENST00000616333 UNC13AQ9UPW8 1703 aa14.83□□□□□ -0.03
LINC01742-201ENST00000616333 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
LINC01742-201ENST00000616333 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
LINC01742-201ENST00000616333 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
LINC01742-201ENST00000616333 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
LINC01742-201ENST00000616333 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC01742-201ENST00000616333 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
LINC01742-201ENST00000616333 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
LINC01742-201ENST00000616333 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
LINC01742-201ENST00000616333 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
LINC01742-201ENST00000616333 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
LINC01742-201ENST00000616333 CECR2Q9BXF3 1484 aa14.1□□□□□ -0.15
LINC01742-201ENST00000616333 DNAJC5BQ9UF47 199 aa14.04□□□□□ -0.16
LINC01742-201ENST00000616333 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
LINC01742-201ENST00000616333 HMGXB3Q12766 1538 aa14.01□□□□□ -0.17
LINC01742-201ENST00000616333 SMARCA2P51531 1590 aa14□□□□□ -0.17
LINC01742-201ENST00000616333 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
LINC01742-201ENST00000616333 ATAD2BQ9ULI0 1458 aa13.98□□□□□ -0.17
LINC01742-201ENST00000616333 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
LINC01742-201ENST00000616333 WIZO95785 1651 aa13.82□□□□□ -0.2
LINC01742-201ENST00000616333 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
LINC01742-201ENST00000616333 TOP2AP11388 1531 aaKnown RBP13.78□□□□□ -0.2
LINC01742-201ENST00000616333 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
LINC01742-201ENST00000616333 CFTRP13569 1480 aa13.55□□□□□ -0.24
LINC01742-201ENST00000616333 PRDM2Q13029 1718 aa13.53□□□□□ -0.24
LINC01742-201ENST00000616333 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
LINC01742-201ENST00000616333 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
LINC01742-201ENST00000616333 NESP48681 1621 aa13.46□□□□□ -0.26
LINC01742-201ENST00000616333 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
LINC01742-201ENST00000616333 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
LINC01742-201ENST00000616333 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
LINC01742-201ENST00000616333 WDR62O43379 1518 aa13.34□□□□□ -0.27
LINC01742-201ENST00000616333 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
LINC01742-201ENST00000616333 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
LINC01742-201ENST00000616333 CUX2O14529 1486 aa13.29□□□□□ -0.28
LINC01742-201ENST00000616333 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
LINC01742-201ENST00000616333 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
LINC01742-201ENST00000616333 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
LINC01742-201ENST00000616333 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
LINC01742-201ENST00000616333 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
LINC01742-201ENST00000616333 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
LINC01742-201ENST00000616333 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
LINC01742-201ENST00000616333 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
LINC01742-201ENST00000616333 CUX1P39880 1505 aa13.14□□□□□ -0.31
LINC01742-201ENST00000616333 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
LINC01742-201ENST00000616333 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
LINC01742-201ENST00000616333 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
LINC01742-201ENST00000616333 POLA1P09884 1462 aaPredicted RBP13.08□□□□□ -0.32
LINC01742-201ENST00000616333 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
LINC01742-201ENST00000616333 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
LINC01742-201ENST00000616333 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
LINC01742-201ENST00000616333 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
LINC01742-201ENST00000616333 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
LINC01742-201ENST00000616333 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
LINC01742-201ENST00000616333 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
LINC01742-201ENST00000616333 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
LINC01742-201ENST00000616333 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
LINC01742-201ENST00000616333 SOGA1O94964 1423 aa12.92□□□□□ -0.34
LINC01742-201ENST00000616333 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
LINC01742-201ENST00000616333 ERICH3Q5RHP9 1530 aa12.86□□□□□ -0.35
LINC01742-201ENST00000616333 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
LINC01742-201ENST00000616333 MAGI1Q96QZ7 1491 aaPredicted RBP12.85□□□□□ -0.35
LINC01742-201ENST00000616333 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
LINC01742-201ENST00000616333 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
LINC01742-201ENST00000616333 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC01742-201ENST00000616333 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
LINC01742-201ENST00000616333 TDRD9Q8NDG6 1382 aaKnown RBP12.78□□□□□ -0.36
LINC01742-201ENST00000616333 CUL7Q14999 1698 aa12.77□□□□□ -0.37
LINC01742-201ENST00000616333 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
LINC01742-201ENST00000616333 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
LINC01742-201ENST00000616333 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
LINC01742-201ENST00000616333 CHD1O14646 1710 aa12.74□□□□□ -0.37
LINC01742-201ENST00000616333 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.37
LINC01742-201ENST00000616333 IGF1RP08069 1367 aa12.71□□□□□ -0.37
LINC01742-201ENST00000616333 EEA1Q15075 1411 aa12.71□□□□□ -0.38
LINC01742-201ENST00000616333 CLASP1Q7Z460 1538 aa12.7□□□□□ -0.38
LINC01742-201ENST00000616333 NUP160Q12769 1436 aa12.7□□□□□ -0.38
LINC01742-201ENST00000616333 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
LINC01742-201ENST00000616333 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
LINC01742-201ENST00000616333 PRXQ9BXM0 1461 aa12.67□□□□□ -0.38
LINC01742-201ENST00000616333 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
LINC01742-201ENST00000616333 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
LINC01742-201ENST00000616333 TRIM41Q8WV44 630 aa12.63□□□□□ -0.39
LINC01742-201ENST00000616333 CEP170Q5SW79 1584 aa12.63□□□□□ -0.39
LINC01742-201ENST00000616333 KIF21BO75037 1637 aa12.59□□□□□ -0.39
LINC01742-201ENST00000616333 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
LINC01742-201ENST00000616333 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
LINC01742-201ENST00000616333 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
LINC01742-201ENST00000616333 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
LINC01742-201ENST00000616333 KIAA0586Q9BVV6 1533 aa12.55□□□□□ -0.4
LINC01742-201ENST00000616333 CTTNBP2Q8WZ74 1663 aa12.52□□□□□ -0.4
LINC01742-201ENST00000616333 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms