RNA–Protein interactions for RNA: ENST00000616318.1

RPUSD2-203, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

Gene RPUSD2, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-203ENST00000616318 NISCHQ9Y2I1 1504 aa38.51■■■■□ 3.76
RPUSD2-203ENST00000616318 CCDC180Q9P1Z9 1646 aa34.32■■■■□ 3.08
RPUSD2-203ENST00000616318 ABCC9O60706 1549 aa33.78■■■■□ 3
RPUSD2-203ENST00000616318 RB1CC1Q8TDY2 1594 aa32.36■■■□□ 2.77
RPUSD2-203ENST00000616318 DCAF8L2P0C7V8 631 aa32.29■■■□□ 2.76
RPUSD2-203ENST00000616318 NACADO15069 1562 aa32.25■■■□□ 2.75
RPUSD2-203ENST00000616318 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
RPUSD2-203ENST00000616318 MYO15BQ96JP2 1530 aa31.94■■■□□ 2.7
RPUSD2-203ENST00000616318 UNC13AQ9UPW8 1703 aa31.79■■■□□ 2.68
RPUSD2-203ENST00000616318 DCAF1Q9Y4B6 1507 aa31.78■■■□□ 2.68
RPUSD2-203ENST00000616318 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
RPUSD2-203ENST00000616318 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
RPUSD2-203ENST00000616318 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
RPUSD2-203ENST00000616318 DNAJC5BQ9UF47 199 aa31.38■■■□□ 2.61
RPUSD2-203ENST00000616318 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
RPUSD2-203ENST00000616318 EIF4G1Q04637 1599 aaKnown RBP30.59■■■□□ 2.49
RPUSD2-203ENST00000616318 CC2D2AQ9P2K1 1620 aa30.54■■■□□ 2.48
RPUSD2-203ENST00000616318 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
RPUSD2-203ENST00000616318 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
RPUSD2-203ENST00000616318 BAZ1AQ9NRL2 1556 aaPredicted RBP29.83■■■□□ 2.37
RPUSD2-203ENST00000616318 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
RPUSD2-203ENST00000616318 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
RPUSD2-203ENST00000616318 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
RPUSD2-203ENST00000616318 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
RPUSD2-203ENST00000616318 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
RPUSD2-203ENST00000616318 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
RPUSD2-203ENST00000616318 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
RPUSD2-203ENST00000616318 WIZO95785 1651 aa29.45■■■□□ 2.31
RPUSD2-203ENST00000616318 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
RPUSD2-203ENST00000616318 NESP48681 1621 aa29.2■■■□□ 2.27
RPUSD2-203ENST00000616318 ERCC6Q03468 1493 aa29.08■■■□□ 2.25
RPUSD2-203ENST00000616318 TOP2AP11388 1531 aaKnown RBP29.04■■■□□ 2.24
RPUSD2-203ENST00000616318 LAMC3Q9Y6N6 1575 aa29.02■■■□□ 2.24
RPUSD2-203ENST00000616318 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
RPUSD2-203ENST00000616318 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
RPUSD2-203ENST00000616318 DNAJC5Q9H3Z4 198 aa28.79■■■□□ 2.2
RPUSD2-203ENST00000616318 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
RPUSD2-203ENST00000616318 THOC2Q8NI27 1593 aaKnown RBP28.78■■■□□ 2.2
RPUSD2-203ENST00000616318 CUX2O14529 1486 aa28.77■■■□□ 2.2
RPUSD2-203ENST00000616318 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
RPUSD2-203ENST00000616318 CFTRP13569 1480 aa28.68■■■□□ 2.18
RPUSD2-203ENST00000616318 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
RPUSD2-203ENST00000616318 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
RPUSD2-203ENST00000616318 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
RPUSD2-203ENST00000616318 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
RPUSD2-203ENST00000616318 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
RPUSD2-203ENST00000616318 WDR62O43379 1518 aa28.47■■■□□ 2.15
RPUSD2-203ENST00000616318 URB2Q14146 1524 aaKnown RBP28.35■■■□□ 2.13
RPUSD2-203ENST00000616318 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
RPUSD2-203ENST00000616318 DNMBPQ6XZF7 1577 aa28.08■■■□□ 2.09
RPUSD2-203ENST00000616318 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
RPUSD2-203ENST00000616318 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
RPUSD2-203ENST00000616318 ZNF608Q9ULD9 1512 aaPredicted RBP27.91■■■□□ 2.06
RPUSD2-203ENST00000616318 CUX1P39880 1505 aa27.89■■■□□ 2.06
RPUSD2-203ENST00000616318 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
RPUSD2-203ENST00000616318 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
RPUSD2-203ENST00000616318 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
RPUSD2-203ENST00000616318 EIF4G3O43432 1585 aaKnown RBP27.81■■■□□ 2.04
RPUSD2-203ENST00000616318 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
RPUSD2-203ENST00000616318 SOGA1O94964 1423 aa27.74■■■□□ 2.03
RPUSD2-203ENST00000616318 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.03
RPUSD2-203ENST00000616318 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
RPUSD2-203ENST00000616318 TDRD9Q8NDG6 1382 aaKnown RBP27.63■■■□□ 2.01
RPUSD2-203ENST00000616318 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
RPUSD2-203ENST00000616318 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
RPUSD2-203ENST00000616318 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
RPUSD2-203ENST00000616318 TOP2BQ02880 1626 aa27.59■■■□□ 2.01
RPUSD2-203ENST00000616318 CHD1O14646 1710 aa27.55■■■□□ 2
RPUSD2-203ENST00000616318 OSCARQ8IYS5 282 aa27.54■■■□□ 2
RPUSD2-203ENST00000616318 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
RPUSD2-203ENST00000616318 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
RPUSD2-203ENST00000616318 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
RPUSD2-203ENST00000616318 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.98
RPUSD2-203ENST00000616318 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
RPUSD2-203ENST00000616318 FBLN2P98095 1184 aa27.42■■□□□ 1.98
RPUSD2-203ENST00000616318 GRIN2BQ13224 1484 aa27.42■■□□□ 1.98
RPUSD2-203ENST00000616318 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
RPUSD2-203ENST00000616318 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
RPUSD2-203ENST00000616318 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
RPUSD2-203ENST00000616318 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
RPUSD2-203ENST00000616318 RIMBP3CA6NJZ7 1639 aa27.24■■□□□ 1.95
RPUSD2-203ENST00000616318 RIMBP3BA6NNM3 1639 aa27.24■■□□□ 1.95
RPUSD2-203ENST00000616318 RIMBP3Q9UFD9 1639 aa27.24■■□□□ 1.95
RPUSD2-203ENST00000616318 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
RPUSD2-203ENST00000616318 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
RPUSD2-203ENST00000616318 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
RPUSD2-203ENST00000616318 CLASP1Q7Z460 1538 aa27.15■■□□□ 1.94
RPUSD2-203ENST00000616318 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
RPUSD2-203ENST00000616318 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
RPUSD2-203ENST00000616318 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
RPUSD2-203ENST00000616318 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
RPUSD2-203ENST00000616318 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
RPUSD2-203ENST00000616318 NUP160Q12769 1436 aa26.95■■□□□ 1.9
RPUSD2-203ENST00000616318 IGF1RP08069 1367 aa26.94■■□□□ 1.9
RPUSD2-203ENST00000616318 CYB5RLQ6IPT4 315 aa26.92■■□□□ 1.9
RPUSD2-203ENST00000616318 CUL7Q14999 1698 aa26.92■■□□□ 1.9
RPUSD2-203ENST00000616318 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
RPUSD2-203ENST00000616318 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
RPUSD2-203ENST00000616318 SHROOM2Q13796 1616 aa26.82■■□□□ 1.88
RPUSD2-203ENST00000616318 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms