RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
AL353770.3-201ENST00000616253 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
AL353770.3-201ENST00000616253 ZCCHC6Q5VYS8 1495 aaKnown RBP18.92■□□□□ 0.62
AL353770.3-201ENST00000616253 ABCC9O60706 1549 aa18.58■□□□□ 0.56
AL353770.3-201ENST00000616253 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
AL353770.3-201ENST00000616253 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
AL353770.3-201ENST00000616253 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
AL353770.3-201ENST00000616253 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
AL353770.3-201ENST00000616253 NACADO15069 1562 aa18.18■□□□□ 0.5
AL353770.3-201ENST00000616253 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
AL353770.3-201ENST00000616253 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
AL353770.3-201ENST00000616253 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
AL353770.3-201ENST00000616253 UNC13AQ9UPW8 1703 aa17.71■□□□□ 0.43
AL353770.3-201ENST00000616253 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
AL353770.3-201ENST00000616253 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
AL353770.3-201ENST00000616253 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
AL353770.3-201ENST00000616253 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
AL353770.3-201ENST00000616253 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
AL353770.3-201ENST00000616253 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
AL353770.3-201ENST00000616253 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
AL353770.3-201ENST00000616253 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
AL353770.3-201ENST00000616253 WIZO95785 1651 aa17.28■□□□□ 0.36
AL353770.3-201ENST00000616253 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
AL353770.3-201ENST00000616253 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
AL353770.3-201ENST00000616253 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
AL353770.3-201ENST00000616253 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
AL353770.3-201ENST00000616253 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
AL353770.3-201ENST00000616253 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
AL353770.3-201ENST00000616253 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
AL353770.3-201ENST00000616253 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
AL353770.3-201ENST00000616253 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
AL353770.3-201ENST00000616253 HMGXB3Q12766 1538 aa16.78■□□□□ 0.28
AL353770.3-201ENST00000616253 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
AL353770.3-201ENST00000616253 TRIM41Q8WV44 630 aa16.69■□□□□ 0.26
AL353770.3-201ENST00000616253 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
AL353770.3-201ENST00000616253 DNAJC5Q9H3Z4 198 aa16.6■□□□□ 0.25
AL353770.3-201ENST00000616253 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.22
AL353770.3-201ENST00000616253 CFTRP13569 1480 aa16.43■□□□□ 0.22
AL353770.3-201ENST00000616253 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
AL353770.3-201ENST00000616253 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
AL353770.3-201ENST00000616253 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
AL353770.3-201ENST00000616253 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
AL353770.3-201ENST00000616253 CUX2O14529 1486 aa16.35■□□□□ 0.21
AL353770.3-201ENST00000616253 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
AL353770.3-201ENST00000616253 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
AL353770.3-201ENST00000616253 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
AL353770.3-201ENST00000616253 SOGA1O94964 1423 aa16.3■□□□□ 0.2
AL353770.3-201ENST00000616253 CUX1P39880 1505 aa16.26■□□□□ 0.19
AL353770.3-201ENST00000616253 EEA1Q15075 1411 aa16.25■□□□□ 0.19
AL353770.3-201ENST00000616253 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
AL353770.3-201ENST00000616253 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
AL353770.3-201ENST00000616253 NESP48681 1621 aa16.21■□□□□ 0.19
AL353770.3-201ENST00000616253 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
AL353770.3-201ENST00000616253 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
AL353770.3-201ENST00000616253 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
AL353770.3-201ENST00000616253 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
AL353770.3-201ENST00000616253 CEP164Q9UPV0 1460 aa16.08■□□□□ 0.17
AL353770.3-201ENST00000616253 KIF21BO75037 1637 aa16.08■□□□□ 0.16
AL353770.3-201ENST00000616253 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
AL353770.3-201ENST00000616253 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
AL353770.3-201ENST00000616253 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
AL353770.3-201ENST00000616253 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
AL353770.3-201ENST00000616253 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
AL353770.3-201ENST00000616253 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
AL353770.3-201ENST00000616253 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
AL353770.3-201ENST00000616253 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
AL353770.3-201ENST00000616253 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
AL353770.3-201ENST00000616253 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
AL353770.3-201ENST00000616253 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
AL353770.3-201ENST00000616253 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
AL353770.3-201ENST00000616253 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
AL353770.3-201ENST00000616253 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
AL353770.3-201ENST00000616253 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
AL353770.3-201ENST00000616253 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
AL353770.3-201ENST00000616253 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
AL353770.3-201ENST00000616253 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
AL353770.3-201ENST00000616253 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
AL353770.3-201ENST00000616253 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
AL353770.3-201ENST00000616253 IGF1RP08069 1367 aa15.86■□□□□ 0.13
AL353770.3-201ENST00000616253 CLIP1P30622 1438 aa15.81■□□□□ 0.12
AL353770.3-201ENST00000616253 PCGF6Q9BYE7 350 aa15.8■□□□□ 0.12
AL353770.3-201ENST00000616253 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
AL353770.3-201ENST00000616253 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
AL353770.3-201ENST00000616253 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
AL353770.3-201ENST00000616253 WDR62O43379 1518 aa15.78■□□□□ 0.12
AL353770.3-201ENST00000616253 CUL7Q14999 1698 aa15.76■□□□□ 0.11
AL353770.3-201ENST00000616253 TRIM26Q12899 539 aaPredicted RBP15.74■□□□□ 0.11
AL353770.3-201ENST00000616253 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
AL353770.3-201ENST00000616253 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
AL353770.3-201ENST00000616253 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
AL353770.3-201ENST00000616253 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
AL353770.3-201ENST00000616253 VPS8Q8N3P4 1428 aa15.68■□□□□ 0.1
AL353770.3-201ENST00000616253 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
AL353770.3-201ENST00000616253 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
AL353770.3-201ENST00000616253 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
AL353770.3-201ENST00000616253 CTTNBP2Q8WZ74 1663 aa15.63■□□□□ 0.09
AL353770.3-201ENST00000616253 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
AL353770.3-201ENST00000616253 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
AL353770.3-201ENST00000616253 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
AL353770.3-201ENST00000616253 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms