RNA–Protein interactions for RNA: ENST00000616222.4

AL157392.3-252, humanhuman

TSL 5

Gene AL157392.3, Length 744 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL157392.3-252ENST00000616222 NISCHQ9Y2I1 1504 aa22.04■■□□□ 1.12
AL157392.3-252ENST00000616222 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
AL157392.3-252ENST00000616222 ABCC9O60706 1549 aa19.2■□□□□ 0.66
AL157392.3-252ENST00000616222 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
AL157392.3-252ENST00000616222 NACADO15069 1562 aa18.55■□□□□ 0.56
AL157392.3-252ENST00000616222 MYO15BQ96JP2 1530 aa18.45■□□□□ 0.54
AL157392.3-252ENST00000616222 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
AL157392.3-252ENST00000616222 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
AL157392.3-252ENST00000616222 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
AL157392.3-252ENST00000616222 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
AL157392.3-252ENST00000616222 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
AL157392.3-252ENST00000616222 PABPN1Q86U42 306 aaKnown RBP eCLIP17.89■□□□□ 0.45
AL157392.3-252ENST00000616222 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
AL157392.3-252ENST00000616222 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
AL157392.3-252ENST00000616222 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
AL157392.3-252ENST00000616222 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
AL157392.3-252ENST00000616222 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.37
AL157392.3-252ENST00000616222 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
AL157392.3-252ENST00000616222 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
AL157392.3-252ENST00000616222 SMARCA4P51532 1647 aa17.12■□□□□ 0.33
AL157392.3-252ENST00000616222 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
AL157392.3-252ENST00000616222 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
AL157392.3-252ENST00000616222 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
AL157392.3-252ENST00000616222 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
AL157392.3-252ENST00000616222 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
AL157392.3-252ENST00000616222 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
AL157392.3-252ENST00000616222 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
AL157392.3-252ENST00000616222 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
AL157392.3-252ENST00000616222 WIZO95785 1651 aa16.73■□□□□ 0.27
AL157392.3-252ENST00000616222 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
AL157392.3-252ENST00000616222 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
AL157392.3-252ENST00000616222 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
AL157392.3-252ENST00000616222 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
AL157392.3-252ENST00000616222 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
AL157392.3-252ENST00000616222 NESP48681 1621 aa16.55■□□□□ 0.24
AL157392.3-252ENST00000616222 CUX2O14529 1486 aa16.53■□□□□ 0.24
AL157392.3-252ENST00000616222 CFTRP13569 1480 aa16.45■□□□□ 0.22
AL157392.3-252ENST00000616222 KIF21AQ7Z4S6 1674 aa16.4■□□□□ 0.22
AL157392.3-252ENST00000616222 THOC2Q8NI27 1593 aaKnown RBP16.38■□□□□ 0.21
AL157392.3-252ENST00000616222 CCDC88BA6NC98 1476 aa16.38■□□□□ 0.21
AL157392.3-252ENST00000616222 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
AL157392.3-252ENST00000616222 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
AL157392.3-252ENST00000616222 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
AL157392.3-252ENST00000616222 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
AL157392.3-252ENST00000616222 WDR62O43379 1518 aa16.29■□□□□ 0.2
AL157392.3-252ENST00000616222 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
AL157392.3-252ENST00000616222 ABCC8Q09428 1581 aa16.21■□□□□ 0.18
AL157392.3-252ENST00000616222 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
AL157392.3-252ENST00000616222 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
AL157392.3-252ENST00000616222 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
AL157392.3-252ENST00000616222 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
AL157392.3-252ENST00000616222 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
AL157392.3-252ENST00000616222 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
AL157392.3-252ENST00000616222 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
AL157392.3-252ENST00000616222 CUX1P39880 1505 aa15.89■□□□□ 0.13
AL157392.3-252ENST00000616222 SOGA1O94964 1423 aa15.89■□□□□ 0.13
AL157392.3-252ENST00000616222 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
AL157392.3-252ENST00000616222 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
AL157392.3-252ENST00000616222 ZNF608Q9ULD9 1512 aaPredicted RBP15.85■□□□□ 0.13
AL157392.3-252ENST00000616222 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
AL157392.3-252ENST00000616222 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
AL157392.3-252ENST00000616222 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
AL157392.3-252ENST00000616222 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
AL157392.3-252ENST00000616222 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
AL157392.3-252ENST00000616222 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
AL157392.3-252ENST00000616222 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
AL157392.3-252ENST00000616222 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
AL157392.3-252ENST00000616222 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
AL157392.3-252ENST00000616222 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
AL157392.3-252ENST00000616222 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
AL157392.3-252ENST00000616222 SYNJ1O43426 1573 aa15.72■□□□□ 0.11
AL157392.3-252ENST00000616222 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.11
AL157392.3-252ENST00000616222 ABCA5Q8WWZ7 1642 aa15.68■□□□□ 0.1
AL157392.3-252ENST00000616222 SNAPC4Q5SXM2 1469 aa15.67■□□□□ 0.1
AL157392.3-252ENST00000616222 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
AL157392.3-252ENST00000616222 CHD1O14646 1710 aa15.65■□□□□ 0.1
AL157392.3-252ENST00000616222 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
AL157392.3-252ENST00000616222 FBLN2P98095 1184 aa15.64■□□□□ 0.09
AL157392.3-252ENST00000616222 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
AL157392.3-252ENST00000616222 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
AL157392.3-252ENST00000616222 FHAD1B1AJZ9 1412 aa15.56■□□□□ 0.08
AL157392.3-252ENST00000616222 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
AL157392.3-252ENST00000616222 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
AL157392.3-252ENST00000616222 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
AL157392.3-252ENST00000616222 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
AL157392.3-252ENST00000616222 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
AL157392.3-252ENST00000616222 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
AL157392.3-252ENST00000616222 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
AL157392.3-252ENST00000616222 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
AL157392.3-252ENST00000616222 CUL7Q14999 1698 aa15.47■□□□□ 0.07
AL157392.3-252ENST00000616222 NUP160Q12769 1436 aa15.45■□□□□ 0.06
AL157392.3-252ENST00000616222 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
AL157392.3-252ENST00000616222 IGF1RP08069 1367 aa15.4■□□□□ 0.06
AL157392.3-252ENST00000616222 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
AL157392.3-252ENST00000616222 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
AL157392.3-252ENST00000616222 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
AL157392.3-252ENST00000616222 CYB5RLQ6IPT4 315 aa15.33■□□□□ 0.04
AL157392.3-252ENST00000616222 SHROOM2Q13796 1616 aa15.32■□□□□ 0.04
AL157392.3-252ENST00000616222 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
AL157392.3-252ENST00000616222 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms