RNA–Protein interactions for RNA: ENST00000616173.4

MFSD4A-210, Transcript of major facilitator superfamily domain containing 4A, humanhuman

TSL 5

Gene MFSD4A, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD4A-210ENST00000616173 NISCHQ9Y2I1 1504 aa28.4■■■□□ 2.14
MFSD4A-210ENST00000616173 ABCC9O60706 1549 aa26■■□□□ 1.75
MFSD4A-210ENST00000616173 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.71
MFSD4A-210ENST00000616173 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
MFSD4A-210ENST00000616173 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
MFSD4A-210ENST00000616173 NACADO15069 1562 aa24.28■■□□□ 1.48
MFSD4A-210ENST00000616173 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
MFSD4A-210ENST00000616173 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
MFSD4A-210ENST00000616173 PABPN1Q86U42 306 aaKnown RBP eCLIP24.11■■□□□ 1.45
MFSD4A-210ENST00000616173 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
MFSD4A-210ENST00000616173 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
MFSD4A-210ENST00000616173 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
MFSD4A-210ENST00000616173 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
MFSD4A-210ENST00000616173 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
MFSD4A-210ENST00000616173 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.34
MFSD4A-210ENST00000616173 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
MFSD4A-210ENST00000616173 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
MFSD4A-210ENST00000616173 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
MFSD4A-210ENST00000616173 DNAJC5Q9H3Z4 198 aa22.74■■□□□ 1.23
MFSD4A-210ENST00000616173 CUX2O14529 1486 aa22.44■■□□□ 1.18
MFSD4A-210ENST00000616173 ERCC6Q03468 1493 aa22.43■■□□□ 1.18
MFSD4A-210ENST00000616173 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
MFSD4A-210ENST00000616173 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
MFSD4A-210ENST00000616173 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
MFSD4A-210ENST00000616173 NESP48681 1621 aa22.27■■□□□ 1.16
MFSD4A-210ENST00000616173 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
MFSD4A-210ENST00000616173 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
MFSD4A-210ENST00000616173 THOC2Q8NI27 1593 aaKnown RBP22.13■■□□□ 1.13
MFSD4A-210ENST00000616173 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
MFSD4A-210ENST00000616173 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
MFSD4A-210ENST00000616173 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
MFSD4A-210ENST00000616173 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
MFSD4A-210ENST00000616173 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
MFSD4A-210ENST00000616173 MROH2BQ7Z745 1585 aa21.93■■□□□ 1.1
MFSD4A-210ENST00000616173 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
MFSD4A-210ENST00000616173 WIZO95785 1651 aa21.75■■□□□ 1.07
MFSD4A-210ENST00000616173 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
MFSD4A-210ENST00000616173 MRC2Q9UBG0 1479 aa21.7■■□□□ 1.06
MFSD4A-210ENST00000616173 WDR62O43379 1518 aa21.67■■□□□ 1.06
MFSD4A-210ENST00000616173 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
MFSD4A-210ENST00000616173 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
MFSD4A-210ENST00000616173 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
MFSD4A-210ENST00000616173 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
MFSD4A-210ENST00000616173 CFTRP13569 1480 aa21.39■■□□□ 1.01
MFSD4A-210ENST00000616173 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
MFSD4A-210ENST00000616173 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
MFSD4A-210ENST00000616173 OSCARQ8IYS5 282 aa21.31■■□□□ 1
MFSD4A-210ENST00000616173 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
MFSD4A-210ENST00000616173 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
MFSD4A-210ENST00000616173 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
MFSD4A-210ENST00000616173 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
MFSD4A-210ENST00000616173 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
MFSD4A-210ENST00000616173 CHD1O14646 1710 aa21.11■□□□□ 0.97
MFSD4A-210ENST00000616173 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
MFSD4A-210ENST00000616173 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
MFSD4A-210ENST00000616173 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
MFSD4A-210ENST00000616173 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
MFSD4A-210ENST00000616173 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
MFSD4A-210ENST00000616173 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
MFSD4A-210ENST00000616173 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
MFSD4A-210ENST00000616173 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.94
MFSD4A-210ENST00000616173 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
MFSD4A-210ENST00000616173 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
MFSD4A-210ENST00000616173 ARAP1Q96P48 1450 aa20.87■□□□□ 0.93
MFSD4A-210ENST00000616173 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
MFSD4A-210ENST00000616173 FBLN2P98095 1184 aa20.83■□□□□ 0.93
MFSD4A-210ENST00000616173 TRHP20396 242 aaPredicted RBP20.8■□□□□ 0.92
MFSD4A-210ENST00000616173 RAD54L2Q9Y4B4 1467 aa20.8■□□□□ 0.92
MFSD4A-210ENST00000616173 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
MFSD4A-210ENST00000616173 SNAPC4Q5SXM2 1469 aa20.71■□□□□ 0.91
MFSD4A-210ENST00000616173 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
MFSD4A-210ENST00000616173 SOGA1O94964 1423 aa20.69■□□□□ 0.9
MFSD4A-210ENST00000616173 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
MFSD4A-210ENST00000616173 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
MFSD4A-210ENST00000616173 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
MFSD4A-210ENST00000616173 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
MFSD4A-210ENST00000616173 CUX1P39880 1505 aa20.63■□□□□ 0.89
MFSD4A-210ENST00000616173 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
MFSD4A-210ENST00000616173 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
MFSD4A-210ENST00000616173 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
MFSD4A-210ENST00000616173 SYNJ2O15056 1496 aa20.52■□□□□ 0.88
MFSD4A-210ENST00000616173 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
MFSD4A-210ENST00000616173 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
MFSD4A-210ENST00000616173 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
MFSD4A-210ENST00000616173 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
MFSD4A-210ENST00000616173 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
MFSD4A-210ENST00000616173 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
MFSD4A-210ENST00000616173 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
MFSD4A-210ENST00000616173 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
MFSD4A-210ENST00000616173 KIF13AQ9H1H9 1805 aa20.31■□□□□ 0.84
MFSD4A-210ENST00000616173 SHROOM2Q13796 1616 aa20.26■□□□□ 0.83
MFSD4A-210ENST00000616173 BIVM-ERCC5R4GMW8 1640 aa20.26■□□□□ 0.83
MFSD4A-210ENST00000616173 NUP160Q12769 1436 aa20.22■□□□□ 0.83
MFSD4A-210ENST00000616173 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
MFSD4A-210ENST00000616173 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
MFSD4A-210ENST00000616173 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
MFSD4A-210ENST00000616173 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
MFSD4A-210ENST00000616173 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
MFSD4A-210ENST00000616173 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
MFSD4A-210ENST00000616173 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms