RNA–Protein interactions for RNA: ENST00000616128.1

CISD3-205, Transcript of CDGSH iron sulfur domain 3, humanhuman

TSL 2

Gene CISD3, Length 773 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISD3-205ENST00000616128 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
CISD3-205ENST00000616128 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
CISD3-205ENST00000616128 ABCC9O60706 1549 aa31.59■■■□□ 2.65
CISD3-205ENST00000616128 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
CISD3-205ENST00000616128 NACADO15069 1562 aa30.28■■■□□ 2.44
CISD3-205ENST00000616128 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
CISD3-205ENST00000616128 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
CISD3-205ENST00000616128 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
CISD3-205ENST00000616128 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
CISD3-205ENST00000616128 UNC13AQ9UPW8 1703 aa29.63■■■□□ 2.33
CISD3-205ENST00000616128 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
CISD3-205ENST00000616128 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.29
CISD3-205ENST00000616128 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
CISD3-205ENST00000616128 SHROOM4Q9ULL8 1493 aa29.2■■■□□ 2.26
CISD3-205ENST00000616128 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
CISD3-205ENST00000616128 EIF4G1Q04637 1599 aaKnown RBP28.67■■■□□ 2.18
CISD3-205ENST00000616128 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
CISD3-205ENST00000616128 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
CISD3-205ENST00000616128 SMARCA4P51532 1647 aa27.94■■■□□ 2.06
CISD3-205ENST00000616128 NCAPD3P42695 1498 aa27.93■■■□□ 2.06
CISD3-205ENST00000616128 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
CISD3-205ENST00000616128 SMARCA2P51531 1590 aa27.86■■■□□ 2.05
CISD3-205ENST00000616128 ATAD2BQ9ULI0 1458 aa27.86■■■□□ 2.05
CISD3-205ENST00000616128 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
CISD3-205ENST00000616128 PEG3Q9GZU2 1588 aa27.72■■■□□ 2.03
CISD3-205ENST00000616128 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
CISD3-205ENST00000616128 BAZ1BQ9UIG0 1483 aaKnown RBP27.63■■■□□ 2.01
CISD3-205ENST00000616128 WIZO95785 1651 aa27.33■■□□□ 1.97
CISD3-205ENST00000616128 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
CISD3-205ENST00000616128 LAMC3Q9Y6N6 1575 aa27.26■■□□□ 1.95
CISD3-205ENST00000616128 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
CISD3-205ENST00000616128 NESP48681 1621 aa27.23■■□□□ 1.95
CISD3-205ENST00000616128 CUX2O14529 1486 aa27.18■■□□□ 1.94
CISD3-205ENST00000616128 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
CISD3-205ENST00000616128 PDS5BQ9NTI5 1447 aa27.08■■□□□ 1.93
CISD3-205ENST00000616128 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
CISD3-205ENST00000616128 KIF21AQ7Z4S6 1674 aa26.95■■□□□ 1.91
CISD3-205ENST00000616128 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
CISD3-205ENST00000616128 CFTRP13569 1480 aa26.87■■□□□ 1.89
CISD3-205ENST00000616128 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
CISD3-205ENST00000616128 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
CISD3-205ENST00000616128 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
CISD3-205ENST00000616128 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
CISD3-205ENST00000616128 WDR62O43379 1518 aa26.7■■□□□ 1.86
CISD3-205ENST00000616128 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
CISD3-205ENST00000616128 DNAJC5Q9H3Z4 198 aa26.64■■□□□ 1.86
CISD3-205ENST00000616128 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
CISD3-205ENST00000616128 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
CISD3-205ENST00000616128 SUPT5HO00267 1087 aaKnown RBP26.29■■□□□ 1.8
CISD3-205ENST00000616128 TOPBP1Q92547 1522 aa26.29■■□□□ 1.8
CISD3-205ENST00000616128 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
CISD3-205ENST00000616128 IFT140Q96RY7 1462 aa26.23■■□□□ 1.79
CISD3-205ENST00000616128 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
CISD3-205ENST00000616128 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
CISD3-205ENST00000616128 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
CISD3-205ENST00000616128 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
CISD3-205ENST00000616128 EIF4G3O43432 1585 aaKnown RBP25.98■■□□□ 1.75
CISD3-205ENST00000616128 CUX1P39880 1505 aa25.95■■□□□ 1.74
CISD3-205ENST00000616128 SOGA1O94964 1423 aa25.95■■□□□ 1.74
CISD3-205ENST00000616128 FGD5Q6ZNL6 1462 aa25.92■■□□□ 1.74
CISD3-205ENST00000616128 WDR97A6NE52 1622 aa25.91■■□□□ 1.74
CISD3-205ENST00000616128 AQRO60306 1485 aaKnown RBP eCLIP25.88■■□□□ 1.73
CISD3-205ENST00000616128 RAD54L2Q9Y4B4 1467 aa25.88■■□□□ 1.73
CISD3-205ENST00000616128 TDRD9Q8NDG6 1382 aaKnown RBP25.79■■□□□ 1.72
CISD3-205ENST00000616128 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
CISD3-205ENST00000616128 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
CISD3-205ENST00000616128 CHD1O14646 1710 aa25.71■■□□□ 1.71
CISD3-205ENST00000616128 TOP2BQ02880 1626 aa25.7■■□□□ 1.71
CISD3-205ENST00000616128 ABCA10Q8WWZ4 1543 aa25.7■■□□□ 1.7
CISD3-205ENST00000616128 GRIN2BQ13224 1484 aa25.7■■□□□ 1.7
CISD3-205ENST00000616128 MAGI1Q96QZ7 1491 aaPredicted RBP25.67■■□□□ 1.7
CISD3-205ENST00000616128 GAPVD1Q14C86 1478 aa25.65■■□□□ 1.7
CISD3-205ENST00000616128 SNAPC4Q5SXM2 1469 aa25.65■■□□□ 1.7
CISD3-205ENST00000616128 FBLN2P98095 1184 aa25.64■■□□□ 1.7
CISD3-205ENST00000616128 SYNJ1O43426 1573 aa25.62■■□□□ 1.69
CISD3-205ENST00000616128 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
CISD3-205ENST00000616128 PBRM1Q86U86 1689 aa25.6■■□□□ 1.69
CISD3-205ENST00000616128 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
CISD3-205ENST00000616128 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
CISD3-205ENST00000616128 SYNJ2O15056 1496 aa25.56■■□□□ 1.68
CISD3-205ENST00000616128 RIMBP3CA6NJZ7 1639 aa25.55■■□□□ 1.68
CISD3-205ENST00000616128 RIMBP3BA6NNM3 1639 aa25.55■■□□□ 1.68
CISD3-205ENST00000616128 RIMBP3Q9UFD9 1639 aa25.55■■□□□ 1.68
CISD3-205ENST00000616128 ARHGEF11O15085 1522 aa25.52■■□□□ 1.68
CISD3-205ENST00000616128 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
CISD3-205ENST00000616128 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
CISD3-205ENST00000616128 ADAMTS12P58397 1594 aa25.37■■□□□ 1.65
CISD3-205ENST00000616128 FHAD1B1AJZ9 1412 aa25.36■■□□□ 1.65
CISD3-205ENST00000616128 GRIN2AQ12879 1464 aa25.34■■□□□ 1.65
CISD3-205ENST00000616128 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
CISD3-205ENST00000616128 ARAP1Q96P48 1450 aa25.28■■□□□ 1.64
CISD3-205ENST00000616128 NUP160Q12769 1436 aa25.26■■□□□ 1.63
CISD3-205ENST00000616128 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
CISD3-205ENST00000616128 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
CISD3-205ENST00000616128 IGF1RP08069 1367 aa25.13■■□□□ 1.61
CISD3-205ENST00000616128 CUL7Q14999 1698 aa25.13■■□□□ 1.61
CISD3-205ENST00000616128 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
CISD3-205ENST00000616128 JPH4Q96JJ6 628 aa25■■□□□ 1.59
CISD3-205ENST00000616128 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
CISD3-205ENST00000616128 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms