RNA–Protein interactions for RNA: ENST00000616078.1

LINC01879-202, Transcript of long intergenic non-protein coding RNA 1879, humanhuman

Gene LINC01879, Length 1,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01879-202ENST00000616078 NISCHQ9Y2I1 1504 aa32.54■■■□□ 2.8
LINC01879-202ENST00000616078 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
LINC01879-202ENST00000616078 ABCC9O60706 1549 aa29.08■■■□□ 2.25
LINC01879-202ENST00000616078 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
LINC01879-202ENST00000616078 NACADO15069 1562 aa27.6■■■□□ 2.01
LINC01879-202ENST00000616078 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
LINC01879-202ENST00000616078 MYO15BQ96JP2 1530 aa27.27■■□□□ 1.96
LINC01879-202ENST00000616078 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
LINC01879-202ENST00000616078 UNC13AQ9UPW8 1703 aa27.08■■□□□ 1.93
LINC01879-202ENST00000616078 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
LINC01879-202ENST00000616078 ZCCHC6Q5VYS8 1495 aaKnown RBP26.98■■□□□ 1.91
LINC01879-202ENST00000616078 DCAF1Q9Y4B6 1507 aa26.93■■□□□ 1.9
LINC01879-202ENST00000616078 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
LINC01879-202ENST00000616078 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
LINC01879-202ENST00000616078 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
LINC01879-202ENST00000616078 CC2D2AQ9P2K1 1620 aa26.29■■□□□ 1.8
LINC01879-202ENST00000616078 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
LINC01879-202ENST00000616078 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
LINC01879-202ENST00000616078 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
LINC01879-202ENST00000616078 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
LINC01879-202ENST00000616078 SMARCA4P51532 1647 aa25.36■■□□□ 1.65
LINC01879-202ENST00000616078 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
LINC01879-202ENST00000616078 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
LINC01879-202ENST00000616078 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
LINC01879-202ENST00000616078 PEG3Q9GZU2 1588 aa25.16■■□□□ 1.62
LINC01879-202ENST00000616078 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
LINC01879-202ENST00000616078 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
LINC01879-202ENST00000616078 CUX2O14529 1486 aa25.11■■□□□ 1.61
LINC01879-202ENST00000616078 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
LINC01879-202ENST00000616078 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
LINC01879-202ENST00000616078 NESP48681 1621 aa24.99■■□□□ 1.59
LINC01879-202ENST00000616078 LAMC3Q9Y6N6 1575 aa24.89■■□□□ 1.58
LINC01879-202ENST00000616078 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
LINC01879-202ENST00000616078 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
LINC01879-202ENST00000616078 WIZO95785 1651 aa24.73■■□□□ 1.55
LINC01879-202ENST00000616078 CADPSQ9ULU8 1353 aa24.7■■□□□ 1.54
LINC01879-202ENST00000616078 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
LINC01879-202ENST00000616078 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
LINC01879-202ENST00000616078 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
LINC01879-202ENST00000616078 WDR62O43379 1518 aa24.46■■□□□ 1.51
LINC01879-202ENST00000616078 TOP2AP11388 1531 aaKnown RBP24.46■■□□□ 1.51
LINC01879-202ENST00000616078 CFTRP13569 1480 aa24.43■■□□□ 1.5
LINC01879-202ENST00000616078 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
LINC01879-202ENST00000616078 FANCD2Q9BXW9 1451 aa24.4■■□□□ 1.5
LINC01879-202ENST00000616078 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
LINC01879-202ENST00000616078 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
LINC01879-202ENST00000616078 CCDC88BA6NC98 1476 aa24.16■■□□□ 1.46
LINC01879-202ENST00000616078 OSCARQ8IYS5 282 aa23.95■■□□□ 1.42
LINC01879-202ENST00000616078 IFT140Q96RY7 1462 aa23.95■■□□□ 1.42
LINC01879-202ENST00000616078 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
LINC01879-202ENST00000616078 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
LINC01879-202ENST00000616078 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
LINC01879-202ENST00000616078 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
LINC01879-202ENST00000616078 ZNF608Q9ULD9 1512 aaPredicted RBP23.86■■□□□ 1.41
LINC01879-202ENST00000616078 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
LINC01879-202ENST00000616078 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
LINC01879-202ENST00000616078 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
LINC01879-202ENST00000616078 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.38
LINC01879-202ENST00000616078 RIMBP3CA6NJZ7 1639 aa23.6■■□□□ 1.37
LINC01879-202ENST00000616078 RIMBP3BA6NNM3 1639 aa23.6■■□□□ 1.37
LINC01879-202ENST00000616078 RIMBP3Q9UFD9 1639 aa23.6■■□□□ 1.37
LINC01879-202ENST00000616078 SOGA1O94964 1423 aa23.59■■□□□ 1.37
LINC01879-202ENST00000616078 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
LINC01879-202ENST00000616078 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
LINC01879-202ENST00000616078 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
LINC01879-202ENST00000616078 WDR97A6NE52 1622 aa23.54■■□□□ 1.36
LINC01879-202ENST00000616078 CHD1O14646 1710 aa23.54■■□□□ 1.36
LINC01879-202ENST00000616078 CUX1P39880 1505 aa23.53■■□□□ 1.36
LINC01879-202ENST00000616078 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
LINC01879-202ENST00000616078 FBLN2P98095 1184 aa23.47■■□□□ 1.35
LINC01879-202ENST00000616078 SUPT5HO00267 1087 aaKnown RBP23.44■■□□□ 1.34
LINC01879-202ENST00000616078 SNAPC4Q5SXM2 1469 aa23.42■■□□□ 1.34
LINC01879-202ENST00000616078 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
LINC01879-202ENST00000616078 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
LINC01879-202ENST00000616078 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
LINC01879-202ENST00000616078 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
LINC01879-202ENST00000616078 ARAP1Q96P48 1450 aa23.32■■□□□ 1.32
LINC01879-202ENST00000616078 ABCA10Q8WWZ4 1543 aa23.31■■□□□ 1.32
LINC01879-202ENST00000616078 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
LINC01879-202ENST00000616078 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
LINC01879-202ENST00000616078 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
LINC01879-202ENST00000616078 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
LINC01879-202ENST00000616078 PBRM1Q86U86 1689 aa23.27■■□□□ 1.32
LINC01879-202ENST00000616078 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
LINC01879-202ENST00000616078 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
LINC01879-202ENST00000616078 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
LINC01879-202ENST00000616078 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
LINC01879-202ENST00000616078 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
LINC01879-202ENST00000616078 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
LINC01879-202ENST00000616078 ADAMTS12P58397 1594 aa23.07■■□□□ 1.28
LINC01879-202ENST00000616078 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
LINC01879-202ENST00000616078 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
LINC01879-202ENST00000616078 NUP160Q12769 1436 aa23.02■■□□□ 1.28
LINC01879-202ENST00000616078 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
LINC01879-202ENST00000616078 SHROOM2Q13796 1616 aa22.9■■□□□ 1.26
LINC01879-202ENST00000616078 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
LINC01879-202ENST00000616078 PRG4Q92954 1404 aaPredicted RBP22.77■■□□□ 1.24
LINC01879-202ENST00000616078 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
LINC01879-202ENST00000616078 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
LINC01879-202ENST00000616078 RUSC2Q8N2Y8 1516 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms