RNA–Protein interactions for RNA: ENST00000616070.4

HSH2D-207, Transcript of hematopoietic SH2 domain containing, humanhuman

TSL 2

Gene HSH2D, Length 2,473 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSH2D-207ENST00000616070 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
HSH2D-207ENST00000616070 CCDC180Q9P1Z9 1646 aa28.73■■■□□ 2.19
HSH2D-207ENST00000616070 ABCC9O60706 1549 aa28.12■■■□□ 2.09
HSH2D-207ENST00000616070 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
HSH2D-207ENST00000616070 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
HSH2D-207ENST00000616070 NACADO15069 1562 aa27.05■■□□□ 1.92
HSH2D-207ENST00000616070 ZCCHC6Q5VYS8 1495 aaKnown RBP26.91■■□□□ 1.9
HSH2D-207ENST00000616070 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
HSH2D-207ENST00000616070 DCAF1Q9Y4B6 1507 aa26.77■■□□□ 1.88
HSH2D-207ENST00000616070 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
HSH2D-207ENST00000616070 PABPN1Q86U42 306 aaKnown RBP eCLIP26.3■■□□□ 1.8
HSH2D-207ENST00000616070 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
HSH2D-207ENST00000616070 SCRIBQ14160 1630 aa26.18■■□□□ 1.78
HSH2D-207ENST00000616070 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
HSH2D-207ENST00000616070 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
HSH2D-207ENST00000616070 HRCP23327 699 aa25.81■■□□□ 1.72
HSH2D-207ENST00000616070 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
HSH2D-207ENST00000616070 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
HSH2D-207ENST00000616070 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
HSH2D-207ENST00000616070 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
HSH2D-207ENST00000616070 PELP1Q8IZL8 1130 aaKnown RBP25.18■■□□□ 1.62
HSH2D-207ENST00000616070 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
HSH2D-207ENST00000616070 PCGF6Q9BYE7 350 aa25.09■■□□□ 1.61
HSH2D-207ENST00000616070 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
HSH2D-207ENST00000616070 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
HSH2D-207ENST00000616070 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
HSH2D-207ENST00000616070 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
HSH2D-207ENST00000616070 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
HSH2D-207ENST00000616070 MROH2BQ7Z745 1585 aa24.89■■□□□ 1.57
HSH2D-207ENST00000616070 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
HSH2D-207ENST00000616070 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
HSH2D-207ENST00000616070 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
HSH2D-207ENST00000616070 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
HSH2D-207ENST00000616070 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
HSH2D-207ENST00000616070 WIZO95785 1651 aa24.6■■□□□ 1.53
HSH2D-207ENST00000616070 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.51
HSH2D-207ENST00000616070 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
HSH2D-207ENST00000616070 TRIM26Q12899 539 aaPredicted RBP24.37■■□□□ 1.49
HSH2D-207ENST00000616070 NESP48681 1621 aa24.31■■□□□ 1.48
HSH2D-207ENST00000616070 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
HSH2D-207ENST00000616070 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
HSH2D-207ENST00000616070 MYT1Q01538 1121 aa24.27■■□□□ 1.48
HSH2D-207ENST00000616070 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
HSH2D-207ENST00000616070 CADPSQ9ULU8 1353 aa24.25■■□□□ 1.47
HSH2D-207ENST00000616070 PDS5BQ9NTI5 1447 aa24.17■■□□□ 1.46
HSH2D-207ENST00000616070 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
HSH2D-207ENST00000616070 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
HSH2D-207ENST00000616070 CFTRP13569 1480 aa24.08■■□□□ 1.44
HSH2D-207ENST00000616070 CUX2O14529 1486 aa24.03■■□□□ 1.44
HSH2D-207ENST00000616070 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
HSH2D-207ENST00000616070 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
HSH2D-207ENST00000616070 THOC2Q8NI27 1593 aaKnown RBP23.93■■□□□ 1.42
HSH2D-207ENST00000616070 CEP164Q9UPV0 1460 aa23.91■■□□□ 1.42
HSH2D-207ENST00000616070 MRC2Q9UBG0 1479 aa23.89■■□□□ 1.41
HSH2D-207ENST00000616070 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
HSH2D-207ENST00000616070 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
HSH2D-207ENST00000616070 WDR62O43379 1518 aa23.78■■□□□ 1.4
HSH2D-207ENST00000616070 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
HSH2D-207ENST00000616070 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
HSH2D-207ENST00000616070 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
HSH2D-207ENST00000616070 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
HSH2D-207ENST00000616070 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
HSH2D-207ENST00000616070 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
HSH2D-207ENST00000616070 CENPBP07199 599 aaPredicted RBP23.5■■□□□ 1.35
HSH2D-207ENST00000616070 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
HSH2D-207ENST00000616070 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
HSH2D-207ENST00000616070 CUX1P39880 1505 aa23.35■■□□□ 1.33
HSH2D-207ENST00000616070 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
HSH2D-207ENST00000616070 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
HSH2D-207ENST00000616070 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
HSH2D-207ENST00000616070 SOGA1O94964 1423 aa23.29■■□□□ 1.32
HSH2D-207ENST00000616070 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
HSH2D-207ENST00000616070 ZNF608Q9ULD9 1512 aaPredicted RBP23.28■■□□□ 1.32
HSH2D-207ENST00000616070 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.32
HSH2D-207ENST00000616070 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
HSH2D-207ENST00000616070 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
HSH2D-207ENST00000616070 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
HSH2D-207ENST00000616070 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.2■■□□□ 1.3
HSH2D-207ENST00000616070 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
HSH2D-207ENST00000616070 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
HSH2D-207ENST00000616070 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
HSH2D-207ENST00000616070 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
HSH2D-207ENST00000616070 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.29
HSH2D-207ENST00000616070 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
HSH2D-207ENST00000616070 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
HSH2D-207ENST00000616070 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
HSH2D-207ENST00000616070 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.28
HSH2D-207ENST00000616070 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
HSH2D-207ENST00000616070 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
HSH2D-207ENST00000616070 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
HSH2D-207ENST00000616070 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
HSH2D-207ENST00000616070 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
HSH2D-207ENST00000616070 ABCA5Q8WWZ7 1642 aa22.95■■□□□ 1.26
HSH2D-207ENST00000616070 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
HSH2D-207ENST00000616070 FBLN2P98095 1184 aa22.93■■□□□ 1.26
HSH2D-207ENST00000616070 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
HSH2D-207ENST00000616070 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.26
HSH2D-207ENST00000616070 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
HSH2D-207ENST00000616070 CHD1O14646 1710 aa22.87■■□□□ 1.25
HSH2D-207ENST00000616070 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms