RNA–Protein interactions for RNA: ENST00000616042.1

LRCOL1-205, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 744 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-205ENST00000616042 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
LRCOL1-205ENST00000616042 CCDC180Q9P1Z9 1646 aa41.52■■■■■ 4.24
LRCOL1-205ENST00000616042 ABCC9O60706 1549 aa41.24■■■■■ 4.19
LRCOL1-205ENST00000616042 RB1CC1Q8TDY2 1594 aa39.43■■■■□ 3.9
LRCOL1-205ENST00000616042 NACADO15069 1562 aa39.23■■■■□ 3.87
LRCOL1-205ENST00000616042 DCAF8L2P0C7V8 631 aa38.85■■■■□ 3.81
LRCOL1-205ENST00000616042 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
LRCOL1-205ENST00000616042 DNAJC5BQ9UF47 199 aa38.53■■■■□ 3.76
LRCOL1-205ENST00000616042 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
LRCOL1-205ENST00000616042 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
LRCOL1-205ENST00000616042 PABPN1Q86U42 306 aaKnown RBP eCLIP38.38■■■■□ 3.73
LRCOL1-205ENST00000616042 DCAF1Q9Y4B6 1507 aa38.35■■■■□ 3.73
LRCOL1-205ENST00000616042 BICRAQ9NZM4 1560 aa38.23■■■■□ 3.71
LRCOL1-205ENST00000616042 SHROOM4Q9ULL8 1493 aa37.91■■■■□ 3.66
LRCOL1-205ENST00000616042 SCRIBQ14160 1630 aa37.72■■■■□ 3.63
LRCOL1-205ENST00000616042 CC2D2AQ9P2K1 1620 aa37.3■■■■□ 3.56
LRCOL1-205ENST00000616042 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
LRCOL1-205ENST00000616042 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
LRCOL1-205ENST00000616042 NCAPD3P42695 1498 aa36.22■■■■□ 3.39
LRCOL1-205ENST00000616042 ATAD2BQ9ULI0 1458 aa36.08■■■■□ 3.37
LRCOL1-205ENST00000616042 SMARCA4P51532 1647 aa36.07■■■■□ 3.36
LRCOL1-205ENST00000616042 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
LRCOL1-205ENST00000616042 HMGXB3Q12766 1538 aa35.97■■■■□ 3.35
LRCOL1-205ENST00000616042 BAZ1AQ9NRL2 1556 aaPredicted RBP35.96■■■■□ 3.35
LRCOL1-205ENST00000616042 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
LRCOL1-205ENST00000616042 BAZ1BQ9UIG0 1483 aaKnown RBP35.73■■■■□ 3.31
LRCOL1-205ENST00000616042 ERCC6Q03468 1493 aa35.63■■■■□ 3.29
LRCOL1-205ENST00000616042 MROH2BQ7Z745 1585 aa35.63■■■■□ 3.29
LRCOL1-205ENST00000616042 CUX2O14529 1486 aa35.6■■■■□ 3.29
LRCOL1-205ENST00000616042 NESP48681 1621 aa35.46■■■■□ 3.27
LRCOL1-205ENST00000616042 DNAJC5Q9H3Z4 198 aa35.36■■■■□ 3.25
LRCOL1-205ENST00000616042 LAMC3Q9Y6N6 1575 aa35.36■■■■□ 3.25
LRCOL1-205ENST00000616042 WIZO95785 1651 aa35.17■■■■□ 3.22
LRCOL1-205ENST00000616042 PDS5BQ9NTI5 1447 aa35.15■■■■□ 3.22
LRCOL1-205ENST00000616042 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
LRCOL1-205ENST00000616042 CADPSQ9ULU8 1353 aa35.09■■■■□ 3.21
LRCOL1-205ENST00000616042 KIF21AQ7Z4S6 1674 aa35.01■■■■□ 3.2
LRCOL1-205ENST00000616042 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
LRCOL1-205ENST00000616042 TOP2AP11388 1531 aaKnown RBP34.82■■■■□ 3.16
LRCOL1-205ENST00000616042 MRC2Q9UBG0 1479 aa34.81■■■■□ 3.16
LRCOL1-205ENST00000616042 CFTRP13569 1480 aa34.74■■■■□ 3.15
LRCOL1-205ENST00000616042 WDR62O43379 1518 aa34.74■■■■□ 3.15
LRCOL1-205ENST00000616042 CEP164Q9UPV0 1460 aa34.7■■■■□ 3.15
LRCOL1-205ENST00000616042 FANCD2Q9BXW9 1451 aa34.66■■■■□ 3.14
LRCOL1-205ENST00000616042 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
LRCOL1-205ENST00000616042 URB2Q14146 1524 aaKnown RBP34.35■■■■□ 3.09
LRCOL1-205ENST00000616042 PRDM2Q13029 1718 aa34.35■■■■□ 3.09
LRCOL1-205ENST00000616042 ABCC8Q09428 1581 aa34.05■■■■□ 3.04
LRCOL1-205ENST00000616042 IFT140Q96RY7 1462 aa34.02■■■■□ 3.04
LRCOL1-205ENST00000616042 TOPBP1Q92547 1522 aa34.02■■■■□ 3.04
LRCOL1-205ENST00000616042 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
LRCOL1-205ENST00000616042 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
LRCOL1-205ENST00000616042 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
LRCOL1-205ENST00000616042 TRIM41Q8WV44 630 aa33.74■■■□□ 2.99
LRCOL1-205ENST00000616042 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
LRCOL1-205ENST00000616042 TARBP1Q13395 1621 aaKnown RBP33.72■■■□□ 2.99
LRCOL1-205ENST00000616042 POLA1P09884 1462 aaPredicted RBP33.69■■■□□ 2.98
LRCOL1-205ENST00000616042 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.97
LRCOL1-205ENST00000616042 SOGA1O94964 1423 aa33.53■■■□□ 2.96
LRCOL1-205ENST00000616042 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
LRCOL1-205ENST00000616042 WDR97A6NE52 1622 aa33.49■■■□□ 2.95
LRCOL1-205ENST00000616042 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
LRCOL1-205ENST00000616042 CUX1P39880 1505 aa33.47■■■□□ 2.95
LRCOL1-205ENST00000616042 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
LRCOL1-205ENST00000616042 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
LRCOL1-205ENST00000616042 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
LRCOL1-205ENST00000616042 SUPT5HO00267 1087 aaKnown RBP33.41■■■□□ 2.94
LRCOL1-205ENST00000616042 TDRD9Q8NDG6 1382 aaKnown RBP33.4■■■□□ 2.94
LRCOL1-205ENST00000616042 CHD1O14646 1710 aa33.39■■■□□ 2.94
LRCOL1-205ENST00000616042 ARHGEF11O15085 1522 aa33.39■■■□□ 2.94
LRCOL1-205ENST00000616042 FBLN2P98095 1184 aa33.29■■■□□ 2.92
LRCOL1-205ENST00000616042 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
LRCOL1-205ENST00000616042 MAGI1Q96QZ7 1491 aaPredicted RBP33.26■■■□□ 2.92
LRCOL1-205ENST00000616042 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
LRCOL1-205ENST00000616042 ABCA10Q8WWZ4 1543 aa33.17■■■□□ 2.9
LRCOL1-205ENST00000616042 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
LRCOL1-205ENST00000616042 SYNJ2O15056 1496 aa33.13■■■□□ 2.89
LRCOL1-205ENST00000616042 GAPVD1Q14C86 1478 aa33.13■■■□□ 2.89
LRCOL1-205ENST00000616042 CLASP1Q7Z460 1538 aa33.1■■■□□ 2.89
LRCOL1-205ENST00000616042 SYNJ1O43426 1573 aa33.09■■■□□ 2.89
LRCOL1-205ENST00000616042 CYB5RLQ6IPT4 315 aa33.08■■■□□ 2.89
LRCOL1-205ENST00000616042 ABCA5Q8WWZ7 1642 aa33.08■■■□□ 2.89
LRCOL1-205ENST00000616042 PBRM1Q86U86 1689 aa33.07■■■□□ 2.88
LRCOL1-205ENST00000616042 ARAP1Q96P48 1450 aa33.06■■■□□ 2.88
LRCOL1-205ENST00000616042 WRNQ14191 1432 aaPredicted RBP eCLIP33.06■■■□□ 2.88
LRCOL1-205ENST00000616042 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
LRCOL1-205ENST00000616042 BIVM-ERCC5R4GMW8 1640 aa33.01■■■□□ 2.87
LRCOL1-205ENST00000616042 GRIN2AQ12879 1464 aa32.81■■■□□ 2.84
LRCOL1-205ENST00000616042 ADAMTS12P58397 1594 aa32.8■■■□□ 2.84
LRCOL1-205ENST00000616042 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
LRCOL1-205ENST00000616042 FHAD1B1AJZ9 1412 aa32.75■■■□□ 2.83
LRCOL1-205ENST00000616042 NUP160Q12769 1436 aa32.72■■■□□ 2.83
LRCOL1-205ENST00000616042 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
LRCOL1-205ENST00000616042 TRHP20396 242 aaPredicted RBP32.64■■■□□ 2.82
LRCOL1-205ENST00000616042 SHROOM2Q13796 1616 aa32.55■■■□□ 2.8
LRCOL1-205ENST00000616042 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
LRCOL1-205ENST00000616042 KIF27Q86VH2 1401 aa32.38■■■□□ 2.77
LRCOL1-205ENST00000616042 RUSC2Q8N2Y8 1516 aa32.35■■■□□ 2.77
LRCOL1-205ENST00000616042 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
LRCOL1-205ENST00000616042 JPH4Q96JJ6 628 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms