RNA–Protein interactions for RNA: ENST00000616007.4

SLC36A1-211, Transcript of solute carrier family 36 member 1, humanhuman

TSL 2 BASIC

Gene SLC36A1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC36A1-211ENST00000616007 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
SLC36A1-211ENST00000616007 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
SLC36A1-211ENST00000616007 ABCC9O60706 1549 aa27.83■■■□□ 2.05
SLC36A1-211ENST00000616007 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
SLC36A1-211ENST00000616007 NACADO15069 1562 aa26.35■■□□□ 1.81
SLC36A1-211ENST00000616007 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
SLC36A1-211ENST00000616007 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
SLC36A1-211ENST00000616007 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
SLC36A1-211ENST00000616007 ZCCHC6Q5VYS8 1495 aaKnown RBP25.97■■□□□ 1.75
SLC36A1-211ENST00000616007 PABPN1Q86U42 306 aaKnown RBP eCLIP25.94■■□□□ 1.74
SLC36A1-211ENST00000616007 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SLC36A1-211ENST00000616007 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
SLC36A1-211ENST00000616007 DCAF1Q9Y4B6 1507 aa25.79■■□□□ 1.72
SLC36A1-211ENST00000616007 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
SLC36A1-211ENST00000616007 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
SLC36A1-211ENST00000616007 CC2D2AQ9P2K1 1620 aa25.12■■□□□ 1.61
SLC36A1-211ENST00000616007 EIF4G1Q04637 1599 aaKnown RBP25.11■■□□□ 1.61
SLC36A1-211ENST00000616007 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
SLC36A1-211ENST00000616007 SMARCA4P51532 1647 aa24.34■■□□□ 1.49
SLC36A1-211ENST00000616007 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
SLC36A1-211ENST00000616007 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
SLC36A1-211ENST00000616007 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
SLC36A1-211ENST00000616007 BAZ1AQ9NRL2 1556 aaPredicted RBP24.22■■□□□ 1.47
SLC36A1-211ENST00000616007 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
SLC36A1-211ENST00000616007 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
SLC36A1-211ENST00000616007 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
SLC36A1-211ENST00000616007 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
SLC36A1-211ENST00000616007 NESP48681 1621 aa23.99■■□□□ 1.43
SLC36A1-211ENST00000616007 ERCC6Q03468 1493 aa23.96■■□□□ 1.43
SLC36A1-211ENST00000616007 CUX2O14529 1486 aa23.84■■□□□ 1.41
SLC36A1-211ENST00000616007 WIZO95785 1651 aa23.83■■□□□ 1.41
SLC36A1-211ENST00000616007 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
SLC36A1-211ENST00000616007 THOC2Q8NI27 1593 aaKnown RBP23.68■■□□□ 1.38
SLC36A1-211ENST00000616007 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
SLC36A1-211ENST00000616007 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
SLC36A1-211ENST00000616007 DNAJC5Q9H3Z4 198 aa23.63■■□□□ 1.37
SLC36A1-211ENST00000616007 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
SLC36A1-211ENST00000616007 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
SLC36A1-211ENST00000616007 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
SLC36A1-211ENST00000616007 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
SLC36A1-211ENST00000616007 CFTRP13569 1480 aa23.4■■□□□ 1.34
SLC36A1-211ENST00000616007 WDR62O43379 1518 aa23.37■■□□□ 1.33
SLC36A1-211ENST00000616007 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
SLC36A1-211ENST00000616007 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
SLC36A1-211ENST00000616007 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
SLC36A1-211ENST00000616007 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
SLC36A1-211ENST00000616007 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
SLC36A1-211ENST00000616007 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
SLC36A1-211ENST00000616007 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
SLC36A1-211ENST00000616007 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
SLC36A1-211ENST00000616007 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
SLC36A1-211ENST00000616007 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
SLC36A1-211ENST00000616007 EIF4G3O43432 1585 aaKnown RBP22.76■■□□□ 1.23
SLC36A1-211ENST00000616007 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
SLC36A1-211ENST00000616007 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
SLC36A1-211ENST00000616007 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
SLC36A1-211ENST00000616007 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
SLC36A1-211ENST00000616007 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
SLC36A1-211ENST00000616007 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.222e-6■■■■■ 33.8
SLC36A1-211ENST00000616007 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
SLC36A1-211ENST00000616007 CUX1P39880 1505 aa22.66■■□□□ 1.22
SLC36A1-211ENST00000616007 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
SLC36A1-211ENST00000616007 SOGA1O94964 1423 aa22.6■■□□□ 1.21
SLC36A1-211ENST00000616007 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
SLC36A1-211ENST00000616007 CHD1O14646 1710 aa22.53■■□□□ 1.2
SLC36A1-211ENST00000616007 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
SLC36A1-211ENST00000616007 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
SLC36A1-211ENST00000616007 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
SLC36A1-211ENST00000616007 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
SLC36A1-211ENST00000616007 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
SLC36A1-211ENST00000616007 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
SLC36A1-211ENST00000616007 FBLN2P98095 1184 aa22.45■■□□□ 1.18
SLC36A1-211ENST00000616007 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
SLC36A1-211ENST00000616007 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
SLC36A1-211ENST00000616007 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
SLC36A1-211ENST00000616007 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
SLC36A1-211ENST00000616007 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
SLC36A1-211ENST00000616007 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.16
SLC36A1-211ENST00000616007 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
SLC36A1-211ENST00000616007 CLASP1Q7Z460 1538 aa22.3■■□□□ 1.16
SLC36A1-211ENST00000616007 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
SLC36A1-211ENST00000616007 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
SLC36A1-211ENST00000616007 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
SLC36A1-211ENST00000616007 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
SLC36A1-211ENST00000616007 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
SLC36A1-211ENST00000616007 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
SLC36A1-211ENST00000616007 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
SLC36A1-211ENST00000616007 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
SLC36A1-211ENST00000616007 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
SLC36A1-211ENST00000616007 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
SLC36A1-211ENST00000616007 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SLC36A1-211ENST00000616007 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
SLC36A1-211ENST00000616007 NUP160Q12769 1436 aa22.05■■□□□ 1.12
SLC36A1-211ENST00000616007 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
SLC36A1-211ENST00000616007 SHROOM2Q13796 1616 aa21.92■■□□□ 1.1
SLC36A1-211ENST00000616007 TRHP20396 242 aaPredicted RBP21.91■■□□□ 1.1
SLC36A1-211ENST00000616007 IGF1RP08069 1367 aa21.85■■□□□ 1.09
SLC36A1-211ENST00000616007 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
SLC36A1-211ENST00000616007 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
SLC36A1-211ENST00000616007 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms