RNA–Protein interactions for RNA: ENST00000615974.1

LINC01660-202, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5

Gene LINC01660, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-202ENST00000615974 NISCHQ9Y2I1 1504 aa31.43■■■□□ 2.62
LINC01660-202ENST00000615974 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
LINC01660-202ENST00000615974 ABCC9O60706 1549 aa27.32■■□□□ 1.96
LINC01660-202ENST00000615974 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
LINC01660-202ENST00000615974 NACADO15069 1562 aa26.37■■□□□ 1.81
LINC01660-202ENST00000615974 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
LINC01660-202ENST00000615974 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
LINC01660-202ENST00000615974 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
LINC01660-202ENST00000615974 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
LINC01660-202ENST00000615974 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
LINC01660-202ENST00000615974 PABPN1Q86U42 306 aaKnown RBP eCLIP25.53■■□□□ 1.68
LINC01660-202ENST00000615974 BICRAQ9NZM4 1560 aa25.46■■□□□ 1.67
LINC01660-202ENST00000615974 SHROOM4Q9ULL8 1493 aa25.44■■□□□ 1.66
LINC01660-202ENST00000615974 SCRIBQ14160 1630 aa25.38■■□□□ 1.65
LINC01660-202ENST00000615974 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
LINC01660-202ENST00000615974 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
LINC01660-202ENST00000615974 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
LINC01660-202ENST00000615974 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
LINC01660-202ENST00000615974 BAZ1AQ9NRL2 1556 aaPredicted RBP24.4■■□□□ 1.5
LINC01660-202ENST00000615974 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
LINC01660-202ENST00000615974 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
LINC01660-202ENST00000615974 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
LINC01660-202ENST00000615974 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
LINC01660-202ENST00000615974 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
LINC01660-202ENST00000615974 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
LINC01660-202ENST00000615974 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
LINC01660-202ENST00000615974 BAZ1BQ9UIG0 1483 aaKnown RBP24.08■■□□□ 1.45
LINC01660-202ENST00000615974 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
LINC01660-202ENST00000615974 WIZO95785 1651 aa23.83■■□□□ 1.4
LINC01660-202ENST00000615974 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
LINC01660-202ENST00000615974 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
LINC01660-202ENST00000615974 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
LINC01660-202ENST00000615974 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
LINC01660-202ENST00000615974 NESP48681 1621 aa23.59■■□□□ 1.37
LINC01660-202ENST00000615974 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
LINC01660-202ENST00000615974 CUX2O14529 1486 aa23.48■■□□□ 1.35
LINC01660-202ENST00000615974 CFTRP13569 1480 aa23.45■■□□□ 1.34
LINC01660-202ENST00000615974 CCDC88BA6NC98 1476 aa23.39■■□□□ 1.34
LINC01660-202ENST00000615974 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
LINC01660-202ENST00000615974 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
LINC01660-202ENST00000615974 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
LINC01660-202ENST00000615974 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
LINC01660-202ENST00000615974 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
LINC01660-202ENST00000615974 SUPT5HO00267 1087 aaKnown RBP23.23■■□□□ 1.31
LINC01660-202ENST00000615974 WDR62O43379 1518 aa23.17■■□□□ 1.3
LINC01660-202ENST00000615974 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
LINC01660-202ENST00000615974 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
LINC01660-202ENST00000615974 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
LINC01660-202ENST00000615974 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
LINC01660-202ENST00000615974 DNMBPQ6XZF7 1577 aa22.88■■□□□ 1.25
LINC01660-202ENST00000615974 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
LINC01660-202ENST00000615974 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
LINC01660-202ENST00000615974 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
LINC01660-202ENST00000615974 SOGA1O94964 1423 aa22.65■■□□□ 1.22
LINC01660-202ENST00000615974 CUX1P39880 1505 aa22.65■■□□□ 1.22
LINC01660-202ENST00000615974 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
LINC01660-202ENST00000615974 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
LINC01660-202ENST00000615974 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
LINC01660-202ENST00000615974 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
LINC01660-202ENST00000615974 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
LINC01660-202ENST00000615974 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
LINC01660-202ENST00000615974 OSCARQ8IYS5 282 aa22.53■■□□□ 1.2
LINC01660-202ENST00000615974 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
LINC01660-202ENST00000615974 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.19
LINC01660-202ENST00000615974 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
LINC01660-202ENST00000615974 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
LINC01660-202ENST00000615974 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
LINC01660-202ENST00000615974 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
LINC01660-202ENST00000615974 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
LINC01660-202ENST00000615974 SYNJ1O43426 1573 aa22.4■■□□□ 1.18
LINC01660-202ENST00000615974 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
LINC01660-202ENST00000615974 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
LINC01660-202ENST00000615974 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
LINC01660-202ENST00000615974 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
LINC01660-202ENST00000615974 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
LINC01660-202ENST00000615974 FBLN2P98095 1184 aa22.29■■□□□ 1.16
LINC01660-202ENST00000615974 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
LINC01660-202ENST00000615974 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
LINC01660-202ENST00000615974 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
LINC01660-202ENST00000615974 CHD1O14646 1710 aa22.18■■□□□ 1.14
LINC01660-202ENST00000615974 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
LINC01660-202ENST00000615974 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
LINC01660-202ENST00000615974 ADAMTS12P58397 1594 aa22.08■■□□□ 1.13
LINC01660-202ENST00000615974 GRIN2AQ12879 1464 aa22.08■■□□□ 1.12
LINC01660-202ENST00000615974 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
LINC01660-202ENST00000615974 IGF1RP08069 1367 aa22.04■■□□□ 1.12
LINC01660-202ENST00000615974 CLASP1Q7Z460 1538 aa22.04■■□□□ 1.12
LINC01660-202ENST00000615974 ARHGEF11O15085 1522 aa22.03■■□□□ 1.12
LINC01660-202ENST00000615974 NUP160Q12769 1436 aa22.01■■□□□ 1.11
LINC01660-202ENST00000615974 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
LINC01660-202ENST00000615974 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
LINC01660-202ENST00000615974 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
LINC01660-202ENST00000615974 CUL7Q14999 1698 aa21.96■■□□□ 1.11
LINC01660-202ENST00000615974 CARMIL1Q5VZK9 1371 aa21.92■■□□□ 1.1
LINC01660-202ENST00000615974 CEP170Q5SW79 1584 aa21.89■■□□□ 1.09
LINC01660-202ENST00000615974 CYB5RLQ6IPT4 315 aa21.87■■□□□ 1.09
LINC01660-202ENST00000615974 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
LINC01660-202ENST00000615974 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
LINC01660-202ENST00000615974 KIAA0586Q9BVV6 1533 aa21.81■■□□□ 1.08
LINC01660-202ENST00000615974 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms