RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 NISCHQ9Y2I1 1504 aa40.87■■■■■ 4.13
CDK11B-206ENST00000615951 CCDC180Q9P1Z9 1646 aa35.38■■■■□ 3.26
CDK11B-206ENST00000615951 ZCCHC6Q5VYS8 1495 aaKnown RBP34.47■■■■□ 3.11
CDK11B-206ENST00000615951 DCAF1Q9Y4B6 1507 aa33.85■■■■□ 3.01
CDK11B-206ENST00000615951 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
CDK11B-206ENST00000615951 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
CDK11B-206ENST00000615951 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
CDK11B-206ENST00000615951 ABCC9O60706 1549 aa32.8■■■□□ 2.84
CDK11B-206ENST00000615951 NACADO15069 1562 aa32.8■■■□□ 2.84
CDK11B-206ENST00000615951 SUPT5HO00267 1087 aaKnown RBP32.7■■■□□ 2.83
CDK11B-206ENST00000615951 SCRIBQ14160 1630 aa32.56■■■□□ 2.8
CDK11B-206ENST00000615951 RB1CC1Q8TDY2 1594 aa32.35■■■□□ 2.77
CDK11B-206ENST00000615951 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
CDK11B-206ENST00000615951 UNC13AQ9UPW8 1703 aa31.72■■■□□ 2.67
CDK11B-206ENST00000615951 CHIC1Q5VXU3 224 aa31.71■■■□□ 2.67
CDK11B-206ENST00000615951 CECR2Q9BXF3 1484 aa31.67■■■□□ 2.66
CDK11B-206ENST00000615951 MROH2BQ7Z745 1585 aa31.58■■■□□ 2.65
CDK11B-206ENST00000615951 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.64
CDK11B-206ENST00000615951 BICRAQ9NZM4 1560 aa31.37■■■□□ 2.61
CDK11B-206ENST00000615951 WIZO95785 1651 aa31.35■■■□□ 2.61
CDK11B-206ENST00000615951 SMARCA4P51532 1647 aa31.29■■■□□ 2.6
CDK11B-206ENST00000615951 PELP1Q8IZL8 1130 aaKnown RBP31.18■■■□□ 2.58
CDK11B-206ENST00000615951 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
CDK11B-206ENST00000615951 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
CDK11B-206ENST00000615951 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
CDK11B-206ENST00000615951 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
CDK11B-206ENST00000615951 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
CDK11B-206ENST00000615951 CCDC88BA6NC98 1476 aa30.75■■■□□ 2.51
CDK11B-206ENST00000615951 TRIM41Q8WV44 630 aa30.74■■■□□ 2.51
CDK11B-206ENST00000615951 ATAD2BQ9ULI0 1458 aa30.61■■■□□ 2.49
CDK11B-206ENST00000615951 BAZ1BQ9UIG0 1483 aaKnown RBP30.46■■■□□ 2.47
CDK11B-206ENST00000615951 LOC105371045A0A1W2PR82 267 aa30.46■■■□□ 2.47
CDK11B-206ENST00000615951 HRCP23327 699 aa30.45■■■□□ 2.46
CDK11B-206ENST00000615951 MYT1Q01538 1121 aa30.38■■■□□ 2.45
CDK11B-206ENST00000615951 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
CDK11B-206ENST00000615951 ABCC8Q09428 1581 aa30.27■■■□□ 2.44
CDK11B-206ENST00000615951 NCAPD3P42695 1498 aa30.26■■■□□ 2.43
CDK11B-206ENST00000615951 FAM9AQ8IZU1 332 aaPredicted RBP30.14■■■□□ 2.42
CDK11B-206ENST00000615951 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
CDK11B-206ENST00000615951 EEA1Q15075 1411 aa29.99■■■□□ 2.39
CDK11B-206ENST00000615951 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
CDK11B-206ENST00000615951 SOGA1O94964 1423 aa29.83■■■□□ 2.37
CDK11B-206ENST00000615951 CFTRP13569 1480 aa29.75■■■□□ 2.35
CDK11B-206ENST00000615951 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
CDK11B-206ENST00000615951 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
CDK11B-206ENST00000615951 BIVM-ERCC5R4GMW8 1640 aa29.72■■■□□ 2.35
CDK11B-206ENST00000615951 PCGF6Q9BYE7 350 aa29.72■■■□□ 2.35
CDK11B-206ENST00000615951 CSRNP3Q8WYN3 585 aa29.69■■■□□ 2.34
CDK11B-206ENST00000615951 RUSC2Q8N2Y8 1516 aa29.68■■■□□ 2.34
CDK11B-206ENST00000615951 PRDM2Q13029 1718 aa29.67■■■□□ 2.34
CDK11B-206ENST00000615951 TRIM26Q12899 539 aaPredicted RBP29.64■■■□□ 2.34
CDK11B-206ENST00000615951 EHMT2Q96KQ7 1210 aa29.64■■■□□ 2.33
CDK11B-206ENST00000615951 TNIKQ9UKE5 1360 aa29.6■■■□□ 2.33
CDK11B-206ENST00000615951 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
CDK11B-206ENST00000615951 KIF21BO75037 1637 aa29.56■■■□□ 2.32
CDK11B-206ENST00000615951 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
CDK11B-206ENST00000615951 DNAJC5BQ9UF47 199 aa29.52■■■□□ 2.32
CDK11B-206ENST00000615951 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.31
CDK11B-206ENST00000615951 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
CDK11B-206ENST00000615951 CUX1P39880 1505 aa29.5■■■□□ 2.31
CDK11B-206ENST00000615951 CEP162Q5TB80 1403 aa29.46■■■□□ 2.31
CDK11B-206ENST00000615951 SCAF1Q9H7N4 1312 aaKnown RBP29.34■■■□□ 2.29
CDK11B-206ENST00000615951 UBTFP17480 764 aaKnown RBP29.33■■■□□ 2.29
CDK11B-206ENST00000615951 ERICH3Q5RHP9 1530 aa29.24■■■□□ 2.27
CDK11B-206ENST00000615951 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
CDK11B-206ENST00000615951 RAPGEF2Q9Y4G8 1499 aa29.21■■■□□ 2.27
CDK11B-206ENST00000615951 PRXQ9BXM0 1461 aa29.2■■■□□ 2.27
CDK11B-206ENST00000615951 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
CDK11B-206ENST00000615951 LAMC3Q9Y6N6 1575 aa29.13■■■□□ 2.25
CDK11B-206ENST00000615951 CLIP1P30622 1438 aa29.09■■■□□ 2.25
CDK11B-206ENST00000615951 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
CDK11B-206ENST00000615951 DNMBPQ6XZF7 1577 aa29.06■■■□□ 2.24
CDK11B-206ENST00000615951 NESP48681 1621 aa29■■■□□ 2.23
CDK11B-206ENST00000615951 CUX2O14529 1486 aa28.99■■■□□ 2.23
CDK11B-206ENST00000615951 VPS8Q8N3P4 1428 aa28.95■■■□□ 2.22
CDK11B-206ENST00000615951 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
CDK11B-206ENST00000615951 TTBK1Q5TCY1 1321 aaPredicted RBP28.9■■■□□ 2.22
CDK11B-206ENST00000615951 IGF1RP08069 1367 aa28.9■■■□□ 2.22
CDK11B-206ENST00000615951 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CDK11B-206ENST00000615951 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
CDK11B-206ENST00000615951 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
CDK11B-206ENST00000615951 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
CDK11B-206ENST00000615951 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
CDK11B-206ENST00000615951 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.19
CDK11B-206ENST00000615951 ARAP1Q96P48 1450 aa28.75■■■□□ 2.19
CDK11B-206ENST00000615951 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
CDK11B-206ENST00000615951 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
CDK11B-206ENST00000615951 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
CDK11B-206ENST00000615951 CUL7Q14999 1698 aa28.66■■■□□ 2.18
CDK11B-206ENST00000615951 APLP2Q06481 763 aa28.62■■■□□ 2.17
CDK11B-206ENST00000615951 ARHGAP35Q9NRY4 1499 aa28.62■■■□□ 2.17
CDK11B-206ENST00000615951 RANGAP1P46060 587 aaPredicted RBP28.58■■■□□ 2.17
CDK11B-206ENST00000615951 ABCA5Q8WWZ7 1642 aa28.57■■■□□ 2.16
CDK11B-206ENST00000615951 TARBP1Q13395 1621 aaKnown RBP28.48■■■□□ 2.15
CDK11B-206ENST00000615951 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
CDK11B-206ENST00000615951 GAPVD1Q14C86 1478 aa28.45■■■□□ 2.14
CDK11B-206ENST00000615951 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
CDK11B-206ENST00000615951 MAP3K1Q13233 1512 aa28.39■■■□□ 2.14
CDK11B-206ENST00000615951 EFCAB5A4FU69 1503 aa28.39■■■□□ 2.13
CDK11B-206ENST00000615951 TDRD9Q8NDG6 1382 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms