RNA–Protein interactions for RNA: ENST00000615250.1

RCC1L-203, Transcript of RCC1 like, humanhuman

TSL 4

Gene RCC1L, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-203ENST00000615250 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
RCC1L-203ENST00000615250 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
RCC1L-203ENST00000615250 ABCC9O60706 1549 aa31.04■■■□□ 2.56
RCC1L-203ENST00000615250 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
RCC1L-203ENST00000615250 NACADO15069 1562 aa29.6■■■□□ 2.33
RCC1L-203ENST00000615250 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
RCC1L-203ENST00000615250 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
RCC1L-203ENST00000615250 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
RCC1L-203ENST00000615250 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
RCC1L-203ENST00000615250 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
RCC1L-203ENST00000615250 DNAJC5BQ9UF47 199 aa28.96■■■□□ 2.23
RCC1L-203ENST00000615250 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
RCC1L-203ENST00000615250 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
RCC1L-203ENST00000615250 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
RCC1L-203ENST00000615250 SCRIBQ14160 1630 aa28.47■■■□□ 2.15
RCC1L-203ENST00000615250 EIF4G1Q04637 1599 aaKnown RBP28.11■■■□□ 2.09
RCC1L-203ENST00000615250 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
RCC1L-203ENST00000615250 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
RCC1L-203ENST00000615250 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
RCC1L-203ENST00000615250 SMARCA4P51532 1647 aa27.25■■□□□ 1.95
RCC1L-203ENST00000615250 ATAD2BQ9ULI0 1458 aa27.25■■□□□ 1.95
RCC1L-203ENST00000615250 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
RCC1L-203ENST00000615250 BAZ1AQ9NRL2 1556 aaPredicted RBP27.17■■□□□ 1.94
RCC1L-203ENST00000615250 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
RCC1L-203ENST00000615250 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
RCC1L-203ENST00000615250 BAZ1BQ9UIG0 1483 aaKnown RBP26.96■■□□□ 1.91
RCC1L-203ENST00000615250 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
RCC1L-203ENST00000615250 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
RCC1L-203ENST00000615250 CUX2O14529 1486 aa26.77■■□□□ 1.88
RCC1L-203ENST00000615250 NESP48681 1621 aa26.73■■□□□ 1.87
RCC1L-203ENST00000615250 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
RCC1L-203ENST00000615250 WIZO95785 1651 aa26.61■■□□□ 1.85
RCC1L-203ENST00000615250 PDS5BQ9NTI5 1447 aa26.49■■□□□ 1.83
RCC1L-203ENST00000615250 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
RCC1L-203ENST00000615250 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
RCC1L-203ENST00000615250 CADPSQ9ULU8 1353 aa26.48■■□□□ 1.83
RCC1L-203ENST00000615250 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
RCC1L-203ENST00000615250 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
RCC1L-203ENST00000615250 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
RCC1L-203ENST00000615250 CFTRP13569 1480 aa26.24■■□□□ 1.79
RCC1L-203ENST00000615250 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
RCC1L-203ENST00000615250 WDR62O43379 1518 aa26.19■■□□□ 1.78
RCC1L-203ENST00000615250 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
RCC1L-203ENST00000615250 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
RCC1L-203ENST00000615250 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
RCC1L-203ENST00000615250 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
RCC1L-203ENST00000615250 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
RCC1L-203ENST00000615250 ABCC8Q09428 1581 aa25.7■■□□□ 1.71
RCC1L-203ENST00000615250 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
RCC1L-203ENST00000615250 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
RCC1L-203ENST00000615250 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
RCC1L-203ENST00000615250 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
RCC1L-203ENST00000615250 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
RCC1L-203ENST00000615250 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.67
RCC1L-203ENST00000615250 POLA1P09884 1462 aaPredicted RBP25.44■■□□□ 1.66
RCC1L-203ENST00000615250 EIF4G3O43432 1585 aaKnown RBP25.42■■□□□ 1.66
RCC1L-203ENST00000615250 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
RCC1L-203ENST00000615250 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.651e-7■■■■■ 30.9
RCC1L-203ENST00000615250 SOGA1O94964 1423 aa25.32■■□□□ 1.64
RCC1L-203ENST00000615250 CUX1P39880 1505 aa25.31■■□□□ 1.64
RCC1L-203ENST00000615250 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
RCC1L-203ENST00000615250 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
RCC1L-203ENST00000615250 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
RCC1L-203ENST00000615250 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
RCC1L-203ENST00000615250 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
RCC1L-203ENST00000615250 CHD1O14646 1710 aa25.17■■□□□ 1.62
RCC1L-203ENST00000615250 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
RCC1L-203ENST00000615250 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
RCC1L-203ENST00000615250 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
RCC1L-203ENST00000615250 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
RCC1L-203ENST00000615250 GRIN2BQ13224 1484 aa25.09■■□□□ 1.61
RCC1L-203ENST00000615250 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
RCC1L-203ENST00000615250 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
RCC1L-203ENST00000615250 FBLN2P98095 1184 aa25.07■■□□□ 1.6
RCC1L-203ENST00000615250 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
RCC1L-203ENST00000615250 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
RCC1L-203ENST00000615250 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
RCC1L-203ENST00000615250 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
RCC1L-203ENST00000615250 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
RCC1L-203ENST00000615250 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
RCC1L-203ENST00000615250 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
RCC1L-203ENST00000615250 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
RCC1L-203ENST00000615250 PBRM1Q86U86 1689 aa24.97■■□□□ 1.59
RCC1L-203ENST00000615250 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
RCC1L-203ENST00000615250 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
RCC1L-203ENST00000615250 ARAP1Q96P48 1450 aa24.89■■□□□ 1.57
RCC1L-203ENST00000615250 CYB5RLQ6IPT4 315 aa24.87■■□□□ 1.57
RCC1L-203ENST00000615250 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
RCC1L-203ENST00000615250 ERICH3Q5RHP9 1530 aa24.76■■□□□ 1.55
RCC1L-203ENST00000615250 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
RCC1L-203ENST00000615250 FHAD1B1AJZ9 1412 aa24.73■■□□□ 1.55
RCC1L-203ENST00000615250 NUP160Q12769 1436 aa24.7■■□□□ 1.55
RCC1L-203ENST00000615250 CEP170Q5SW79 1584 aa24.64■■□□□ 1.54
RCC1L-203ENST00000615250 SHROOM2Q13796 1616 aa24.57■■□□□ 1.52
RCC1L-203ENST00000615250 ERCC6L2Q5T890 1561 aa24.51■■□□□ 1.51
RCC1L-203ENST00000615250 KIF27Q86VH2 1401 aa24.5■■□□□ 1.51
RCC1L-203ENST00000615250 TRHP20396 242 aaPredicted RBP24.49■■□□□ 1.51
RCC1L-203ENST00000615250 IGF1RP08069 1367 aa24.47■■□□□ 1.51
RCC1L-203ENST00000615250 JPH4Q96JJ6 628 aa24.42■■□□□ 1.5
RCC1L-203ENST00000615250 CUL7Q14999 1698 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms