RNA–Protein interactions for RNA: ENST00000615202.1

LINC02338-201, Transcript of long intergenic non-protein coding RNA 2338, humanhuman

TSL 2 BASIC

Gene LINC02338, Length 2,753 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02338-201ENST00000615202 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
LINC02338-201ENST00000615202 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
LINC02338-201ENST00000615202 ABCC9O60706 1549 aa19.52■□□□□ 0.72
LINC02338-201ENST00000615202 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
LINC02338-201ENST00000615202 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
LINC02338-201ENST00000615202 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
LINC02338-201ENST00000615202 DCAF1Q9Y4B6 1507 aa19.05■□□□□ 0.64
LINC02338-201ENST00000615202 NACADO15069 1562 aa18.99■□□□□ 0.63
LINC02338-201ENST00000615202 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
LINC02338-201ENST00000615202 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
LINC02338-201ENST00000615202 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
LINC02338-201ENST00000615202 SCRIBQ14160 1630 aa18.58■□□□□ 0.57
LINC02338-201ENST00000615202 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.55
LINC02338-201ENST00000615202 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
LINC02338-201ENST00000615202 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
LINC02338-201ENST00000615202 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
LINC02338-201ENST00000615202 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
LINC02338-201ENST00000615202 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.45
LINC02338-201ENST00000615202 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
LINC02338-201ENST00000615202 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
LINC02338-201ENST00000615202 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
LINC02338-201ENST00000615202 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
LINC02338-201ENST00000615202 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
LINC02338-201ENST00000615202 WIZO95785 1651 aa17.61■□□□□ 0.41
LINC02338-201ENST00000615202 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
LINC02338-201ENST00000615202 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
LINC02338-201ENST00000615202 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
LINC02338-201ENST00000615202 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
LINC02338-201ENST00000615202 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
LINC02338-201ENST00000615202 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
LINC02338-201ENST00000615202 BAZ1BQ9UIG0 1483 aaKnown RBP17.48■□□□□ 0.39
LINC02338-201ENST00000615202 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
LINC02338-201ENST00000615202 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
LINC02338-201ENST00000615202 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
LINC02338-201ENST00000615202 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
LINC02338-201ENST00000615202 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
LINC02338-201ENST00000615202 CFTRP13569 1480 aa17.02■□□□□ 0.31
LINC02338-201ENST00000615202 NESP48681 1621 aa17.01■□□□□ 0.31
LINC02338-201ENST00000615202 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
LINC02338-201ENST00000615202 PRDM2Q13029 1718 aa16.92■□□□□ 0.3
LINC02338-201ENST00000615202 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
LINC02338-201ENST00000615202 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
LINC02338-201ENST00000615202 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
LINC02338-201ENST00000615202 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
LINC02338-201ENST00000615202 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
LINC02338-201ENST00000615202 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
LINC02338-201ENST00000615202 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
LINC02338-201ENST00000615202 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
LINC02338-201ENST00000615202 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
LINC02338-201ENST00000615202 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
LINC02338-201ENST00000615202 CUX1P39880 1505 aa16.65■□□□□ 0.26
LINC02338-201ENST00000615202 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
LINC02338-201ENST00000615202 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
LINC02338-201ENST00000615202 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
LINC02338-201ENST00000615202 WDR62O43379 1518 aa16.61■□□□□ 0.25
LINC02338-201ENST00000615202 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
LINC02338-201ENST00000615202 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
LINC02338-201ENST00000615202 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
LINC02338-201ENST00000615202 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
LINC02338-201ENST00000615202 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
LINC02338-201ENST00000615202 CUX2O14529 1486 aa16.46■□□□□ 0.23
LINC02338-201ENST00000615202 SOGA1O94964 1423 aa16.45■□□□□ 0.22
LINC02338-201ENST00000615202 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
LINC02338-201ENST00000615202 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
LINC02338-201ENST00000615202 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
LINC02338-201ENST00000615202 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
LINC02338-201ENST00000615202 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
LINC02338-201ENST00000615202 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.2
LINC02338-201ENST00000615202 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
LINC02338-201ENST00000615202 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
LINC02338-201ENST00000615202 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
LINC02338-201ENST00000615202 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
LINC02338-201ENST00000615202 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
LINC02338-201ENST00000615202 EIF4G3O43432 1585 aaKnown RBP16.27■□□□□ 0.2
LINC02338-201ENST00000615202 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
LINC02338-201ENST00000615202 FAM9AQ8IZU1 332 aaPredicted RBP16.24■□□□□ 0.19
LINC02338-201ENST00000615202 EEA1Q15075 1411 aa16.23■□□□□ 0.19
LINC02338-201ENST00000615202 PBRM1Q86U86 1689 aa16.21■□□□□ 0.19
LINC02338-201ENST00000615202 GRIN2BQ13224 1484 aa16.2■□□□□ 0.18
LINC02338-201ENST00000615202 IGF1RP08069 1367 aa16.19■□□□□ 0.18
LINC02338-201ENST00000615202 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
LINC02338-201ENST00000615202 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
LINC02338-201ENST00000615202 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
LINC02338-201ENST00000615202 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
LINC02338-201ENST00000615202 CUL7Q14999 1698 aa16.11■□□□□ 0.17
LINC02338-201ENST00000615202 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
LINC02338-201ENST00000615202 CARMIL1Q5VZK9 1371 aa16.1■□□□□ 0.17
LINC02338-201ENST00000615202 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
LINC02338-201ENST00000615202 FHAD1B1AJZ9 1412 aa16.08■□□□□ 0.17
LINC02338-201ENST00000615202 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
LINC02338-201ENST00000615202 SYNJ2O15056 1496 aa16.05■□□□□ 0.16
LINC02338-201ENST00000615202 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
LINC02338-201ENST00000615202 KIF21BO75037 1637 aa16.04■□□□□ 0.16
LINC02338-201ENST00000615202 FBLN2P98095 1184 aa16.03■□□□□ 0.16
LINC02338-201ENST00000615202 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
LINC02338-201ENST00000615202 GRIN2AQ12879 1464 aa16■□□□□ 0.15
LINC02338-201ENST00000615202 CHD1O14646 1710 aa16■□□□□ 0.15
LINC02338-201ENST00000615202 GOLGA3Q08378 1498 aa15.99■□□□□ 0.15
LINC02338-201ENST00000615202 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
LINC02338-201ENST00000615202 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms