RNA–Protein interactions for RNA: ENST00000615117.1

RN7SL248P-201, Transcript of RNA, 7SL, cytoplasmic 248, pseudogene, humanhuman

BASIC

Gene RN7SL248P, Length 329 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL248P-201ENST00000615117 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
RN7SL248P-201ENST00000615117 ABCC9O60706 1549 aa26.52■■□□□ 1.84
RN7SL248P-201ENST00000615117 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
RN7SL248P-201ENST00000615117 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
RN7SL248P-201ENST00000615117 NACADO15069 1562 aa25.01■■□□□ 1.59
RN7SL248P-201ENST00000615117 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
RN7SL248P-201ENST00000615117 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
RN7SL248P-201ENST00000615117 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.54
RN7SL248P-201ENST00000615117 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
RN7SL248P-201ENST00000615117 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
RN7SL248P-201ENST00000615117 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
RN7SL248P-201ENST00000615117 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
RN7SL248P-201ENST00000615117 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
RN7SL248P-201ENST00000615117 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
RN7SL248P-201ENST00000615117 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
RN7SL248P-201ENST00000615117 CC2D2AQ9P2K1 1620 aa23.94■■□□□ 1.42
RN7SL248P-201ENST00000615117 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
RN7SL248P-201ENST00000615117 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
RN7SL248P-201ENST00000615117 NCAPD3P42695 1498 aa23.09■■□□□ 1.29
RN7SL248P-201ENST00000615117 DNAJC5Q9H3Z4 198 aa23.02■■□□□ 1.28
RN7SL248P-201ENST00000615117 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
RN7SL248P-201ENST00000615117 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
RN7SL248P-201ENST00000615117 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
RN7SL248P-201ENST00000615117 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
RN7SL248P-201ENST00000615117 CUX2O14529 1486 aa22.93■■□□□ 1.26
RN7SL248P-201ENST00000615117 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
RN7SL248P-201ENST00000615117 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
RN7SL248P-201ENST00000615117 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
RN7SL248P-201ENST00000615117 NESP48681 1621 aa22.72■■□□□ 1.23
RN7SL248P-201ENST00000615117 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
RN7SL248P-201ENST00000615117 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
RN7SL248P-201ENST00000615117 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
RN7SL248P-201ENST00000615117 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
RN7SL248P-201ENST00000615117 PDS5BQ9NTI5 1447 aa22.5■■□□□ 1.19
RN7SL248P-201ENST00000615117 KIF21AQ7Z4S6 1674 aa22.41■■□□□ 1.18
RN7SL248P-201ENST00000615117 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
RN7SL248P-201ENST00000615117 WIZO95785 1651 aa22.33■■□□□ 1.16
RN7SL248P-201ENST00000615117 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
RN7SL248P-201ENST00000615117 WDR62O43379 1518 aa22.21■■□□□ 1.15
RN7SL248P-201ENST00000615117 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
RN7SL248P-201ENST00000615117 FANCD2Q9BXW9 1451 aa22.14■■□□□ 1.13
RN7SL248P-201ENST00000615117 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.13
RN7SL248P-201ENST00000615117 CFTRP13569 1480 aa22.11■■□□□ 1.13
RN7SL248P-201ENST00000615117 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
RN7SL248P-201ENST00000615117 TRIM41Q8WV44 630 aa22■■□□□ 1.11
RN7SL248P-201ENST00000615117 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
RN7SL248P-201ENST00000615117 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
RN7SL248P-201ENST00000615117 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
RN7SL248P-201ENST00000615117 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
RN7SL248P-201ENST00000615117 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
RN7SL248P-201ENST00000615117 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
RN7SL248P-201ENST00000615117 ABCC8Q09428 1581 aa21.69■■□□□ 1.06
RN7SL248P-201ENST00000615117 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
RN7SL248P-201ENST00000615117 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
RN7SL248P-201ENST00000615117 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
RN7SL248P-201ENST00000615117 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
RN7SL248P-201ENST00000615117 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
RN7SL248P-201ENST00000615117 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
RN7SL248P-201ENST00000615117 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
RN7SL248P-201ENST00000615117 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
RN7SL248P-201ENST00000615117 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
RN7SL248P-201ENST00000615117 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
RN7SL248P-201ENST00000615117 FBLN2P98095 1184 aa21.43■■□□□ 1.02
RN7SL248P-201ENST00000615117 SOGA1O94964 1423 aa21.39■■□□□ 1.02
RN7SL248P-201ENST00000615117 CHD1O14646 1710 aa21.39■■□□□ 1.01
RN7SL248P-201ENST00000615117 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
RN7SL248P-201ENST00000615117 CYB5RLQ6IPT4 315 aa21.37■■□□□ 1.01
RN7SL248P-201ENST00000615117 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
RN7SL248P-201ENST00000615117 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
RN7SL248P-201ENST00000615117 WDR97A6NE52 1622 aa21.31■■□□□ 1
RN7SL248P-201ENST00000615117 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
RN7SL248P-201ENST00000615117 CUX1P39880 1505 aa21.27■■□□□ 1
RN7SL248P-201ENST00000615117 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
RN7SL248P-201ENST00000615117 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
RN7SL248P-201ENST00000615117 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
RN7SL248P-201ENST00000615117 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
RN7SL248P-201ENST00000615117 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
RN7SL248P-201ENST00000615117 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
RN7SL248P-201ENST00000615117 CLASP1Q7Z460 1538 aa21.17■□□□□ 0.98
RN7SL248P-201ENST00000615117 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
RN7SL248P-201ENST00000615117 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
RN7SL248P-201ENST00000615117 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
RN7SL248P-201ENST00000615117 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
RN7SL248P-201ENST00000615117 PBRM1Q86U86 1689 aa21.07■□□□□ 0.96
RN7SL248P-201ENST00000615117 ABCA5Q8WWZ7 1642 aa21.04■□□□□ 0.96
RN7SL248P-201ENST00000615117 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
RN7SL248P-201ENST00000615117 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
RN7SL248P-201ENST00000615117 TOP2BQ02880 1626 aa20.91■□□□□ 0.94
RN7SL248P-201ENST00000615117 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.94
RN7SL248P-201ENST00000615117 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
RN7SL248P-201ENST00000615117 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
RN7SL248P-201ENST00000615117 NUP160Q12769 1436 aa20.87■□□□□ 0.93
RN7SL248P-201ENST00000615117 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
RN7SL248P-201ENST00000615117 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.92
RN7SL248P-201ENST00000615117 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
RN7SL248P-201ENST00000615117 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
RN7SL248P-201ENST00000615117 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
RN7SL248P-201ENST00000615117 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
RN7SL248P-201ENST00000615117 JPH4Q96JJ6 628 aa20.67■□□□□ 0.9
RN7SL248P-201ENST00000615117 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms