RNA–Protein interactions for RNA: ENST00000615016.1

AC004678.1-201, humanhuman

BASIC

Gene AC004678.1, Length 929 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004678.1-201ENST00000615016 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
AC004678.1-201ENST00000615016 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
AC004678.1-201ENST00000615016 ABCC9O60706 1549 aa20.68■□□□□ 0.9
AC004678.1-201ENST00000615016 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
AC004678.1-201ENST00000615016 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
AC004678.1-201ENST00000615016 NACADO15069 1562 aa19.57■□□□□ 0.72
AC004678.1-201ENST00000615016 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
AC004678.1-201ENST00000615016 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
AC004678.1-201ENST00000615016 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC004678.1-201ENST00000615016 UNC13AQ9UPW8 1703 aa19.21■□□□□ 0.67
AC004678.1-201ENST00000615016 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
AC004678.1-201ENST00000615016 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
AC004678.1-201ENST00000615016 DCAF1Q9Y4B6 1507 aa19.13■□□□□ 0.65
AC004678.1-201ENST00000615016 SCRIBQ14160 1630 aa18.89■□□□□ 0.62
AC004678.1-201ENST00000615016 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
AC004678.1-201ENST00000615016 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
AC004678.1-201ENST00000615016 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
AC004678.1-201ENST00000615016 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
AC004678.1-201ENST00000615016 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
AC004678.1-201ENST00000615016 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
AC004678.1-201ENST00000615016 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
AC004678.1-201ENST00000615016 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
AC004678.1-201ENST00000615016 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
AC004678.1-201ENST00000615016 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
AC004678.1-201ENST00000615016 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
AC004678.1-201ENST00000615016 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
AC004678.1-201ENST00000615016 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
AC004678.1-201ENST00000615016 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
AC004678.1-201ENST00000615016 NESP48681 1621 aa17.8■□□□□ 0.44
AC004678.1-201ENST00000615016 CUX2O14529 1486 aa17.75■□□□□ 0.43
AC004678.1-201ENST00000615016 DNAJC5Q9H3Z4 198 aa17.71■□□□□ 0.43
AC004678.1-201ENST00000615016 LAMC3Q9Y6N6 1575 aa17.64■□□□□ 0.41
AC004678.1-201ENST00000615016 WIZO95785 1651 aa17.64■□□□□ 0.41
AC004678.1-201ENST00000615016 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
AC004678.1-201ENST00000615016 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
AC004678.1-201ENST00000615016 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
AC004678.1-201ENST00000615016 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
AC004678.1-201ENST00000615016 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
AC004678.1-201ENST00000615016 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
AC004678.1-201ENST00000615016 MRC2Q9UBG0 1479 aa17.39■□□□□ 0.37
AC004678.1-201ENST00000615016 CFTRP13569 1480 aa17.37■□□□□ 0.37
AC004678.1-201ENST00000615016 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
AC004678.1-201ENST00000615016 WDR62O43379 1518 aa17.34■□□□□ 0.37
AC004678.1-201ENST00000615016 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
AC004678.1-201ENST00000615016 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
AC004678.1-201ENST00000615016 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
AC004678.1-201ENST00000615016 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
AC004678.1-201ENST00000615016 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
AC004678.1-201ENST00000615016 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
AC004678.1-201ENST00000615016 IFT140Q96RY7 1462 aa17■□□□□ 0.31
AC004678.1-201ENST00000615016 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
AC004678.1-201ENST00000615016 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
AC004678.1-201ENST00000615016 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
AC004678.1-201ENST00000615016 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
AC004678.1-201ENST00000615016 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
AC004678.1-201ENST00000615016 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
AC004678.1-201ENST00000615016 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
AC004678.1-201ENST00000615016 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
AC004678.1-201ENST00000615016 EIF4G3O43432 1585 aaKnown RBP16.85■□□□□ 0.29
AC004678.1-201ENST00000615016 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
AC004678.1-201ENST00000615016 SOGA1O94964 1423 aa16.81■□□□□ 0.28
AC004678.1-201ENST00000615016 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
AC004678.1-201ENST00000615016 CUX1P39880 1505 aa16.77■□□□□ 0.28
AC004678.1-201ENST00000615016 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
AC004678.1-201ENST00000615016 FBLN2P98095 1184 aa16.74■□□□□ 0.27
AC004678.1-201ENST00000615016 RIMBP3CA6NJZ7 1639 aa16.73■□□□□ 0.27
AC004678.1-201ENST00000615016 RIMBP3BA6NNM3 1639 aa16.73■□□□□ 0.27
AC004678.1-201ENST00000615016 RIMBP3Q9UFD9 1639 aa16.73■□□□□ 0.27
AC004678.1-201ENST00000615016 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
AC004678.1-201ENST00000615016 CHD1O14646 1710 aa16.69■□□□□ 0.26
AC004678.1-201ENST00000615016 SNAPC4Q5SXM2 1469 aa16.66■□□□□ 0.26
AC004678.1-201ENST00000615016 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
AC004678.1-201ENST00000615016 CYB5RLQ6IPT4 315 aa16.63■□□□□ 0.25
AC004678.1-201ENST00000615016 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
AC004678.1-201ENST00000615016 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
AC004678.1-201ENST00000615016 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
AC004678.1-201ENST00000615016 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
AC004678.1-201ENST00000615016 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.24
AC004678.1-201ENST00000615016 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
AC004678.1-201ENST00000615016 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
AC004678.1-201ENST00000615016 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
AC004678.1-201ENST00000615016 CLASP1Q7Z460 1538 aa16.54■□□□□ 0.24
AC004678.1-201ENST00000615016 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
AC004678.1-201ENST00000615016 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
AC004678.1-201ENST00000615016 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
AC004678.1-201ENST00000615016 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
AC004678.1-201ENST00000615016 BIVM-ERCC5R4GMW8 1640 aa16.49■□□□□ 0.23
AC004678.1-201ENST00000615016 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
AC004678.1-201ENST00000615016 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
AC004678.1-201ENST00000615016 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
AC004678.1-201ENST00000615016 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
AC004678.1-201ENST00000615016 NUP160Q12769 1436 aa16.36■□□□□ 0.21
AC004678.1-201ENST00000615016 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
AC004678.1-201ENST00000615016 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
AC004678.1-201ENST00000615016 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
AC004678.1-201ENST00000615016 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
AC004678.1-201ENST00000615016 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
AC004678.1-201ENST00000615016 IGF1RP08069 1367 aa16.24■□□□□ 0.19
AC004678.1-201ENST00000615016 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
AC004678.1-201ENST00000615016 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms