RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.04
GEN1-208ENST00000614478 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
GEN1-208ENST00000614478 ABCC9O60706 1549 aa34.36■■■■□ 3.09
GEN1-208ENST00000614478 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
GEN1-208ENST00000614478 NACADO15069 1562 aa33.39■■■□□ 2.94
GEN1-208ENST00000614478 DCAF8L2P0C7V8 631 aa33.37■■■□□ 2.93
GEN1-208ENST00000614478 DCAF1Q9Y4B6 1507 aa33.37■■■□□ 2.93
GEN1-208ENST00000614478 MYO15BQ96JP2 1530 aa33.35■■■□□ 2.93
GEN1-208ENST00000614478 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
GEN1-208ENST00000614478 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
GEN1-208ENST00000614478 UNC13AQ9UPW8 1703 aa32.63■■■□□ 2.81
GEN1-208ENST00000614478 SCRIBQ14160 1630 aa32.51■■■□□ 2.79
GEN1-208ENST00000614478 BICRAQ9NZM4 1560 aa32.26■■■□□ 2.76
GEN1-208ENST00000614478 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
GEN1-208ENST00000614478 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
GEN1-208ENST00000614478 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
GEN1-208ENST00000614478 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
GEN1-208ENST00000614478 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.59
GEN1-208ENST00000614478 SMARCA4P51532 1647 aa31.17■■■□□ 2.58
GEN1-208ENST00000614478 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
GEN1-208ENST00000614478 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
GEN1-208ENST00000614478 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
GEN1-208ENST00000614478 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
GEN1-208ENST00000614478 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
GEN1-208ENST00000614478 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
GEN1-208ENST00000614478 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
GEN1-208ENST00000614478 NCAPD3P42695 1498 aa30.77■■■□□ 2.52
GEN1-208ENST00000614478 WIZO95785 1651 aa30.74■■■□□ 2.51
GEN1-208ENST00000614478 HMGXB3Q12766 1538 aa30.69■■■□□ 2.5
GEN1-208ENST00000614478 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
GEN1-208ENST00000614478 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
GEN1-208ENST00000614478 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
GEN1-208ENST00000614478 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
GEN1-208ENST00000614478 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
GEN1-208ENST00000614478 CADPSQ9ULU8 1353 aa29.88■■■□□ 2.37
GEN1-208ENST00000614478 NESP48681 1621 aa29.86■■■□□ 2.37
GEN1-208ENST00000614478 CFTRP13569 1480 aa29.82■■■□□ 2.36
GEN1-208ENST00000614478 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
GEN1-208ENST00000614478 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
GEN1-208ENST00000614478 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
GEN1-208ENST00000614478 ERCC6Q03468 1493 aa29.6■■■□□ 2.33
GEN1-208ENST00000614478 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
GEN1-208ENST00000614478 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
GEN1-208ENST00000614478 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
GEN1-208ENST00000614478 ABCC8Q09428 1581 aa29.4■■■□□ 2.3
GEN1-208ENST00000614478 THOC2Q8NI27 1593 aaKnown RBP29.37■■■□□ 2.29
GEN1-208ENST00000614478 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
GEN1-208ENST00000614478 WDR62O43379 1518 aa29.24■■■□□ 2.27
GEN1-208ENST00000614478 URB2Q14146 1524 aaKnown RBP29.22■■■□□ 2.27
GEN1-208ENST00000614478 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
GEN1-208ENST00000614478 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
GEN1-208ENST00000614478 CUX2O14529 1486 aa29.14■■■□□ 2.25
GEN1-208ENST00000614478 TOPBP1Q92547 1522 aa29.14■■■□□ 2.25
GEN1-208ENST00000614478 CUX1P39880 1505 aa29.07■■■□□ 2.24
GEN1-208ENST00000614478 SYNJ1O43426 1573 aa29.07■■■□□ 2.24
GEN1-208ENST00000614478 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
GEN1-208ENST00000614478 LOC105371045A0A1W2PR82 267 aa29.01■■■□□ 2.23
GEN1-208ENST00000614478 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
GEN1-208ENST00000614478 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
GEN1-208ENST00000614478 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
GEN1-208ENST00000614478 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
GEN1-208ENST00000614478 SOGA1O94964 1423 aa28.87■■■□□ 2.21
GEN1-208ENST00000614478 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
GEN1-208ENST00000614478 TARBP1Q13395 1621 aaKnown RBP28.81■■■□□ 2.2
GEN1-208ENST00000614478 EEA1Q15075 1411 aa28.77■■■□□ 2.2
GEN1-208ENST00000614478 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
GEN1-208ENST00000614478 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
GEN1-208ENST00000614478 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
GEN1-208ENST00000614478 EHMT2Q96KQ7 1210 aa28.68■■■□□ 2.18
GEN1-208ENST00000614478 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
GEN1-208ENST00000614478 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
GEN1-208ENST00000614478 ZNF608Q9ULD9 1512 aaPredicted RBP28.64■■■□□ 2.18
GEN1-208ENST00000614478 EIF4G3O43432 1585 aaKnown RBP28.61■■■□□ 2.17
GEN1-208ENST00000614478 TDRD9Q8NDG6 1382 aaKnown RBP28.55■■■□□ 2.16
GEN1-208ENST00000614478 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
GEN1-208ENST00000614478 ABCA5Q8WWZ7 1642 aa28.53■■■□□ 2.16
GEN1-208ENST00000614478 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
GEN1-208ENST00000614478 PBRM1Q86U86 1689 aa28.46■■■□□ 2.15
GEN1-208ENST00000614478 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
GEN1-208ENST00000614478 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
GEN1-208ENST00000614478 GOLGA3Q08378 1498 aa28.4■■■□□ 2.14
GEN1-208ENST00000614478 KIF21BO75037 1637 aa28.39■■■□□ 2.14
GEN1-208ENST00000614478 ERICH3Q5RHP9 1530 aa28.35■■■□□ 2.13
GEN1-208ENST00000614478 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
GEN1-208ENST00000614478 UBTFP17480 764 aaKnown RBP28.32■■■□□ 2.12
GEN1-208ENST00000614478 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
GEN1-208ENST00000614478 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
GEN1-208ENST00000614478 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
GEN1-208ENST00000614478 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
GEN1-208ENST00000614478 IGF1RP08069 1367 aa28.22■■■□□ 2.11
GEN1-208ENST00000614478 ADAMTS12P58397 1594 aa28.22■■■□□ 2.11
GEN1-208ENST00000614478 CUL7Q14999 1698 aa28.21■■■□□ 2.11
GEN1-208ENST00000614478 CHD1O14646 1710 aa28.19■■■□□ 2.1
GEN1-208ENST00000614478 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
GEN1-208ENST00000614478 CEP162Q5TB80 1403 aa28.17■■■□□ 2.1
GEN1-208ENST00000614478 FHAD1B1AJZ9 1412 aa28.16■■■□□ 2.1
GEN1-208ENST00000614478 CHMP7Q8WUX9 453 aaPredicted RBP28.1■■■□□ 2.09
GEN1-208ENST00000614478 FBLN2P98095 1184 aa28.08■■■□□ 2.09
GEN1-208ENST00000614478 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
GEN1-208ENST00000614478 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms