RNA–Protein interactions for RNA: ENST00000614399.1

MUC3A-204, Transcript of mucin 3A, cell surface associated, humanhuman

TSL 3

Gene MUC3A, Length 1,093 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC3A-204ENST00000614399 NISCHQ9Y2I1 1504 aa58.07■■■■■ 6.89
MUC3A-204ENST00000614399 ABCC9O60706 1549 aa52.43■■■■■ 5.98
MUC3A-204ENST00000614399 CCDC180Q9P1Z9 1646 aa52.19■■■■■ 5.95
MUC3A-204ENST00000614399 RB1CC1Q8TDY2 1594 aa49.72■■■■■ 5.55
MUC3A-204ENST00000614399 DNAJC5BQ9UF47 199 aa49.54■■■■■ 5.52
MUC3A-204ENST00000614399 NACADO15069 1562 aa49.34■■■■■ 5.49
MUC3A-204ENST00000614399 DCAF8L2P0C7V8 631 aa48.97■■■■■ 5.43
MUC3A-204ENST00000614399 UNC13AQ9UPW8 1703 aa48.9■■■■■ 5.42
MUC3A-204ENST00000614399 PABPN1Q86U42 306 aaKnown RBP eCLIP48.78■■■■■ 5.4
MUC3A-204ENST00000614399 MYO15BQ96JP2 1530 aa48.58■■■■■ 5.37
MUC3A-204ENST00000614399 BICRAQ9NZM4 1560 aa48.5■■■■■ 5.35
MUC3A-204ENST00000614399 ZCCHC6Q5VYS8 1495 aaKnown RBP48.1■■■■■ 5.29
MUC3A-204ENST00000614399 DCAF1Q9Y4B6 1507 aa47.91■■■■■ 5.26
MUC3A-204ENST00000614399 SCRIBQ14160 1630 aa47.59■■■■■ 5.21
MUC3A-204ENST00000614399 SHROOM4Q9ULL8 1493 aa47.53■■■■■ 5.2
MUC3A-204ENST00000614399 CC2D2AQ9P2K1 1620 aa47.39■■■■■ 5.18
MUC3A-204ENST00000614399 CECR2Q9BXF3 1484 aa47.21■■■■■ 5.15
MUC3A-204ENST00000614399 EIF4G1Q04637 1599 aaKnown RBP47.2■■■■■ 5.15
MUC3A-204ENST00000614399 NCAPD3P42695 1498 aa45.58■■■■■ 4.89
MUC3A-204ENST00000614399 DNAJC5Q9H3Z4 198 aa45.46■■■■■ 4.87
MUC3A-204ENST00000614399 ATAD2BQ9ULI0 1458 aa45.44■■■■■ 4.87
MUC3A-204ENST00000614399 SMARCA4P51532 1647 aa45.37■■■■■ 4.85
MUC3A-204ENST00000614399 SMARCA2P51531 1590 aa45.22■■■■■ 4.83
MUC3A-204ENST00000614399 HMGXB3Q12766 1538 aa45.21■■■■■ 4.83
MUC3A-204ENST00000614399 CUX2O14529 1486 aa45.17■■■■■ 4.82
MUC3A-204ENST00000614399 ERCC6Q03468 1493 aa45.14■■■■■ 4.82
MUC3A-204ENST00000614399 NESP48681 1621 aa45.06■■■■■ 4.8
MUC3A-204ENST00000614399 BAZ1AQ9NRL2 1556 aaPredicted RBP45.02■■■■■ 4.8
MUC3A-204ENST00000614399 PEG3Q9GZU2 1588 aa44.93■■■■■ 4.78
MUC3A-204ENST00000614399 BAZ1BQ9UIG0 1483 aaKnown RBP44.91■■■■■ 4.78
MUC3A-204ENST00000614399 MROH2BQ7Z745 1585 aa44.82■■■■■ 4.76
MUC3A-204ENST00000614399 THOC2Q8NI27 1593 aaKnown RBP44.64■■■■■ 4.74
MUC3A-204ENST00000614399 LAMC3Q9Y6N6 1575 aa44.56■■■■■ 4.72
MUC3A-204ENST00000614399 KIF21AQ7Z4S6 1674 aa44.5■■■■■ 4.71
MUC3A-204ENST00000614399 WIZO95785 1651 aa44.3■■■■■ 4.68
MUC3A-204ENST00000614399 PDS5BQ9NTI5 1447 aa44.23■■■■■ 4.67
MUC3A-204ENST00000614399 CADPSQ9ULU8 1353 aa44.16■■■■■ 4.66
MUC3A-204ENST00000614399 MRC2Q9UBG0 1479 aa43.95■■■■■ 4.63
MUC3A-204ENST00000614399 WDR62O43379 1518 aa43.9■■■■■ 4.62
MUC3A-204ENST00000614399 RSF1Q96T23 1441 aaPredicted RBP43.75■■■■■ 4.59
MUC3A-204ENST00000614399 CEP164Q9UPV0 1460 aa43.7■■■■■ 4.59
MUC3A-204ENST00000614399 FANCD2Q9BXW9 1451 aa43.67■■■■■ 4.58
MUC3A-204ENST00000614399 CFTRP13569 1480 aa43.65■■■■■ 4.58
MUC3A-204ENST00000614399 TOP2AP11388 1531 aaKnown RBP43.61■■■■■ 4.57
MUC3A-204ENST00000614399 URB2Q14146 1524 aaKnown RBP43.43■■■■■ 4.54
MUC3A-204ENST00000614399 TRIM41Q8WV44 630 aa43.33■■■■■ 4.53
MUC3A-204ENST00000614399 PRDM2Q13029 1718 aa43.3■■■■■ 4.52
MUC3A-204ENST00000614399 CCDC88BA6NC98 1476 aa43.16■■■■■ 4.5
MUC3A-204ENST00000614399 OSCARQ8IYS5 282 aa43.03■■■■■ 4.48
MUC3A-204ENST00000614399 ZNF608Q9ULD9 1512 aaPredicted RBP42.94■■■■■ 4.46
MUC3A-204ENST00000614399 TOPBP1Q92547 1522 aa42.87■■■■■ 4.45
MUC3A-204ENST00000614399 IFT140Q96RY7 1462 aa42.82■■■■■ 4.45
MUC3A-204ENST00000614399 RIMBP3CA6NJZ7 1639 aa42.68■■■■■ 4.42
MUC3A-204ENST00000614399 RIMBP3BA6NNM3 1639 aa42.68■■■■■ 4.42
MUC3A-204ENST00000614399 RIMBP3Q9UFD9 1639 aa42.68■■■■■ 4.42
MUC3A-204ENST00000614399 DNMBPQ6XZF7 1577 aa42.66■■■■■ 4.42
MUC3A-204ENST00000614399 EIF4G3O43432 1585 aaKnown RBP42.65■■■■■ 4.42
MUC3A-204ENST00000614399 ABCC8Q09428 1581 aa42.6■■■■■ 4.41
MUC3A-204ENST00000614399 TARBP1Q13395 1621 aaKnown RBP42.57■■■■■ 4.41
MUC3A-204ENST00000614399 AQRO60306 1485 aaKnown RBP eCLIP42.48■■■■■ 4.39
MUC3A-204ENST00000614399 ARHGEF11O15085 1522 aa42.47■■■■■ 4.39
MUC3A-204ENST00000614399 CHD1O14646 1710 aa42.45■■■■■ 4.39
MUC3A-204ENST00000614399 POLA1P09884 1462 aaPredicted RBP42.42■■■■■ 4.38
MUC3A-204ENST00000614399 RAD54L2Q9Y4B4 1467 aa42.31■■■■■ 4.36
MUC3A-204ENST00000614399 SOGA1O94964 1423 aa42.15■■■■■ 4.34
MUC3A-204ENST00000614399 TDRD9Q8NDG6 1382 aaKnown RBP42.14■■■■■ 4.34
MUC3A-204ENST00000614399 FGD5Q6ZNL6 1462 aa42.11■■■■■ 4.33
MUC3A-204ENST00000614399 CYB5RLQ6IPT4 315 aa42.11■■■■■ 4.33
MUC3A-204ENST00000614399 CUX1P39880 1505 aa42.1■■■■■ 4.33
MUC3A-204ENST00000614399 FBLN2P98095 1184 aa42.09■■■■■ 4.33
MUC3A-204ENST00000614399 ARAP1Q96P48 1450 aa42.08■■■■■ 4.33
MUC3A-204ENST00000614399 SNAPC4Q5SXM2 1469 aa42■■■■■ 4.31
MUC3A-204ENST00000614399 WDR97A6NE52 1622 aa41.95■■■■■ 4.31
MUC3A-204ENST00000614399 CLASP1Q7Z460 1538 aa41.9■■■■■ 4.3
MUC3A-204ENST00000614399 MAGI1Q96QZ7 1491 aaPredicted RBP41.81■■■■■ 4.28
MUC3A-204ENST00000614399 GRIN2BQ13224 1484 aa41.79■■■■■ 4.28
MUC3A-204ENST00000614399 PBRM1Q86U86 1689 aa41.77■■■■■ 4.28
MUC3A-204ENST00000614399 SYNJ1O43426 1573 aa41.73■■■■■ 4.27
MUC3A-204ENST00000614399 CHMP7Q8WUX9 453 aaPredicted RBP41.72■■■■■ 4.27
MUC3A-204ENST00000614399 SYNJ2O15056 1496 aa41.7■■■■■ 4.27
MUC3A-204ENST00000614399 GAPVD1Q14C86 1478 aa41.65■■■■■ 4.26
MUC3A-204ENST00000614399 ABCA5Q8WWZ7 1642 aa41.63■■■■■ 4.26
MUC3A-204ENST00000614399 TRHP20396 242 aaPredicted RBP41.62■■■■■ 4.25
MUC3A-204ENST00000614399 ABCA10Q8WWZ4 1543 aa41.6■■■■■ 4.25
MUC3A-204ENST00000614399 SUPT5HO00267 1087 aaKnown RBP41.56■■■■■ 4.24
MUC3A-204ENST00000614399 BIVM-ERCC5R4GMW8 1640 aa41.36■■■■■ 4.21
MUC3A-204ENST00000614399 ERCC6L2Q5T890 1561 aa41.34■■■■■ 4.21
MUC3A-204ENST00000614399 TOP2BQ02880 1626 aa41.32■■■■■ 4.2
MUC3A-204ENST00000614399 ADAMTS12P58397 1594 aa41.3■■■■■ 4.2
MUC3A-204ENST00000614399 GRIN2AQ12879 1464 aa41.3■■■■■ 4.2
MUC3A-204ENST00000614399 WRNQ14191 1432 aaPredicted RBP eCLIP41.29■■■■■ 4.2
MUC3A-204ENST00000614399 CEP170Q5SW79 1584 aa41.26■■■■■ 4.2
MUC3A-204ENST00000614399 NUP160Q12769 1436 aa41.19■■■■■ 4.18
MUC3A-204ENST00000614399 SHROOM2Q13796 1616 aa41.11■■■■■ 4.17
MUC3A-204ENST00000614399 FHAD1B1AJZ9 1412 aa41.08■■■■■ 4.17
MUC3A-204ENST00000614399 ERICH3Q5RHP9 1530 aa41.04■■■■■ 4.16
MUC3A-204ENST00000614399 PRG4Q92954 1404 aaPredicted RBP40.77■■■■■ 4.12
MUC3A-204ENST00000614399 KIF13AQ9H1H9 1805 aa40.75■■■■■ 4.11
MUC3A-204ENST00000614399 RUSC2Q8N2Y8 1516 aa40.73■■■■■ 4.11
MUC3A-204ENST00000614399 JPH4Q96JJ6 628 aa40.71■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms