RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
CBWD3-210ENST00000614398 CCDC180Q9P1Z9 1646 aa13.19□□□□□ -0.3
CBWD3-210ENST00000614398 ZCCHC6Q5VYS8 1495 aaKnown RBP12.46□□□□□ -0.42
CBWD3-210ENST00000614398 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
CBWD3-210ENST00000614398 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
CBWD3-210ENST00000614398 ABCC9O60706 1549 aa12.37□□□□□ -0.43
CBWD3-210ENST00000614398 NACADO15069 1562 aa12.27□□□□□ -0.44
CBWD3-210ENST00000614398 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
CBWD3-210ENST00000614398 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.5
CBWD3-210ENST00000614398 UNC13AQ9UPW8 1703 aa11.92□□□□□ -0.5
CBWD3-210ENST00000614398 SCRIBQ14160 1630 aa11.88□□□□□ -0.51
CBWD3-210ENST00000614398 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
CBWD3-210ENST00000614398 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
CBWD3-210ENST00000614398 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
CBWD3-210ENST00000614398 PABPN1Q86U42 306 aaKnown RBP eCLIP11.52□□□□□ -0.56
CBWD3-210ENST00000614398 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-210ENST00000614398 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
CBWD3-210ENST00000614398 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
CBWD3-210ENST00000614398 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
CBWD3-210ENST00000614398 PEG3Q9GZU2 1588 aa11.43□□□□□ -0.58
CBWD3-210ENST00000614398 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.59
CBWD3-210ENST00000614398 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-210ENST00000614398 SMARCA2P51531 1590 aa11.35□□□□□ -0.59
CBWD3-210ENST00000614398 HMGXB3Q12766 1538 aa11.31□□□□□ -0.6
CBWD3-210ENST00000614398 ATAD2BQ9ULI0 1458 aa11.3□□□□□ -0.6
CBWD3-210ENST00000614398 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
CBWD3-210ENST00000614398 NCAPD3P42695 1498 aa11.29□□□□□ -0.6
CBWD3-210ENST00000614398 WIZO95785 1651 aa11.28□□□□□ -0.6
CBWD3-210ENST00000614398 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
CBWD3-210ENST00000614398 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
CBWD3-210ENST00000614398 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
CBWD3-210ENST00000614398 SUPT5HO00267 1087 aaKnown RBP11.08□□□□□ -0.64
CBWD3-210ENST00000614398 CCDC88BA6NC98 1476 aa11.05□□□□□ -0.64
CBWD3-210ENST00000614398 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
CBWD3-210ENST00000614398 PRDM2Q13029 1718 aa11□□□□□ -0.65
CBWD3-210ENST00000614398 LAMC3Q9Y6N6 1575 aa10.96□□□□□ -0.65
CBWD3-210ENST00000614398 CFTRP13569 1480 aa10.95□□□□□ -0.66
CBWD3-210ENST00000614398 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
CBWD3-210ENST00000614398 PDS5BQ9NTI5 1447 aa10.81□□□□□ -0.68
CBWD3-210ENST00000614398 NESP48681 1621 aa10.8□□□□□ -0.68
CBWD3-210ENST00000614398 FANCD2Q9BXW9 1451 aa10.78□□□□□ -0.68
CBWD3-210ENST00000614398 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
CBWD3-210ENST00000614398 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
CBWD3-210ENST00000614398 BIVM-ERCC5R4GMW8 1640 aa10.76□□□□□ -0.69
CBWD3-210ENST00000614398 ABCC8Q09428 1581 aa10.75□□□□□ -0.69
CBWD3-210ENST00000614398 DNMBPQ6XZF7 1577 aa10.73□□□□□ -0.69
CBWD3-210ENST00000614398 TOP2BQ02880 1626 aa10.72□□□□□ -0.69
CBWD3-210ENST00000614398 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
CBWD3-210ENST00000614398 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.7
CBWD3-210ENST00000614398 WDR62O43379 1518 aa10.71□□□□□ -0.7
CBWD3-210ENST00000614398 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
CBWD3-210ENST00000614398 CUX1P39880 1505 aa10.69□□□□□ -0.7
CBWD3-210ENST00000614398 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
CBWD3-210ENST00000614398 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
CBWD3-210ENST00000614398 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
CBWD3-210ENST00000614398 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
CBWD3-210ENST00000614398 WDR97A6NE52 1622 aa10.62□□□□□ -0.71
CBWD3-210ENST00000614398 FGD5Q6ZNL6 1462 aa10.59□□□□□ -0.71
CBWD3-210ENST00000614398 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
CBWD3-210ENST00000614398 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
CBWD3-210ENST00000614398 CUX2O14529 1486 aa10.57□□□□□ -0.72
CBWD3-210ENST00000614398 ABCA10Q8WWZ4 1543 aa10.56□□□□□ -0.72
CBWD3-210ENST00000614398 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
CBWD3-210ENST00000614398 EEA1Q15075 1411 aa10.54□□□□□ -0.72
CBWD3-210ENST00000614398 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
CBWD3-210ENST00000614398 ABCA5Q8WWZ7 1642 aa10.52□□□□□ -0.73
CBWD3-210ENST00000614398 SOGA1O94964 1423 aa10.5□□□□□ -0.73
CBWD3-210ENST00000614398 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
CBWD3-210ENST00000614398 KIF27Q86VH2 1401 aa10.46□□□□□ -0.73
CBWD3-210ENST00000614398 ERICH3Q5RHP9 1530 aa10.46□□□□□ -0.74
CBWD3-210ENST00000614398 PBRM1Q86U86 1689 aa10.45□□□□□ -0.74
CBWD3-210ENST00000614398 EIF4G3O43432 1585 aaKnown RBP10.44□□□□□ -0.74
CBWD3-210ENST00000614398 CUL7Q14999 1698 aa10.44□□□□□ -0.74
CBWD3-210ENST00000614398 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
CBWD3-210ENST00000614398 KIF21BO75037 1637 aa10.41□□□□□ -0.74
CBWD3-210ENST00000614398 GRIN2BQ13224 1484 aa10.4□□□□□ -0.74
CBWD3-210ENST00000614398 ZNF608Q9ULD9 1512 aaPredicted RBP10.39□□□□□ -0.75
CBWD3-210ENST00000614398 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
CBWD3-210ENST00000614398 ADAMTS12P58397 1594 aa10.38□□□□□ -0.75
CBWD3-210ENST00000614398 MAGI1Q96QZ7 1491 aaPredicted RBP10.38□□□□□ -0.75
CBWD3-210ENST00000614398 PRXQ9BXM0 1461 aa10.38□□□□□ -0.75
CBWD3-210ENST00000614398 IGF1RP08069 1367 aa10.37□□□□□ -0.75
CBWD3-210ENST00000614398 TDRD9Q8NDG6 1382 aaKnown RBP10.35□□□□□ -0.75
CBWD3-210ENST00000614398 AQRO60306 1485 aaKnown RBP eCLIP10.34□□□□□ -0.75
CBWD3-210ENST00000614398 FHAD1B1AJZ9 1412 aa10.34□□□□□ -0.75
CBWD3-210ENST00000614398 CSRNP3Q8WYN3 585 aa10.33□□□□□ -0.76
CBWD3-210ENST00000614398 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
CBWD3-210ENST00000614398 RAPGEF2Q9Y4G8 1499 aa10.31□□□□□ -0.76
CBWD3-210ENST00000614398 SYNJ2O15056 1496 aa10.31□□□□□ -0.76
CBWD3-210ENST00000614398 GOLGA3Q08378 1498 aa10.3□□□□□ -0.76
CBWD3-210ENST00000614398 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
CBWD3-210ENST00000614398 CTTNBP2Q8WZ74 1663 aa10.27□□□□□ -0.77
CBWD3-210ENST00000614398 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
CBWD3-210ENST00000614398 CHD1O14646 1710 aa10.25□□□□□ -0.77
CBWD3-210ENST00000614398 NUP160Q12769 1436 aa10.24□□□□□ -0.77
CBWD3-210ENST00000614398 TNIKQ9UKE5 1360 aa10.22□□□□□ -0.77
CBWD3-210ENST00000614398 CEP170Q5SW79 1584 aa10.21□□□□□ -0.78
CBWD3-210ENST00000614398 CLASP1Q7Z460 1538 aa10.19□□□□□ -0.78
CBWD3-210ENST00000614398 KIAA0586Q9BVV6 1533 aa10.19□□□□□ -0.78
CBWD3-210ENST00000614398 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms