RNA–Protein interactions for RNA: ENST00000614292.1

LINC01138-205, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 820 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-205ENST00000614292 NISCHQ9Y2I1 1504 aa48.7■■■■■ 5.39
LINC01138-205ENST00000614292 CCDC180Q9P1Z9 1646 aa43.59■■■■■ 4.57
LINC01138-205ENST00000614292 ABCC9O60706 1549 aa43.1■■■■■ 4.49
LINC01138-205ENST00000614292 RB1CC1Q8TDY2 1594 aa41.24■■■■■ 4.19
LINC01138-205ENST00000614292 NACADO15069 1562 aa41.08■■■■■ 4.17
LINC01138-205ENST00000614292 MYO15BQ96JP2 1530 aa40.72■■■■■ 4.11
LINC01138-205ENST00000614292 DCAF8L2P0C7V8 631 aa40.66■■■■■ 4.1
LINC01138-205ENST00000614292 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
LINC01138-205ENST00000614292 UNC13AQ9UPW8 1703 aa40.42■■■■■ 4.06
LINC01138-205ENST00000614292 DCAF1Q9Y4B6 1507 aa40.32■■■■■ 4.04
LINC01138-205ENST00000614292 DNAJC5BQ9UF47 199 aa40.18■■■■■ 4.02
LINC01138-205ENST00000614292 PABPN1Q86U42 306 aaKnown RBP eCLIP40.13■■■■■ 4.01
LINC01138-205ENST00000614292 BICRAQ9NZM4 1560 aa40.13■■■■■ 4.01
LINC01138-205ENST00000614292 SCRIBQ14160 1630 aa39.64■■■■□ 3.94
LINC01138-205ENST00000614292 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
LINC01138-205ENST00000614292 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
LINC01138-205ENST00000614292 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
LINC01138-205ENST00000614292 CECR2Q9BXF3 1484 aa38.8■■■■□ 3.8
LINC01138-205ENST00000614292 NCAPD3P42695 1498 aa37.93■■■■□ 3.66
LINC01138-205ENST00000614292 SMARCA4P51532 1647 aa37.91■■■■□ 3.66
LINC01138-205ENST00000614292 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
LINC01138-205ENST00000614292 BAZ1AQ9NRL2 1556 aaPredicted RBP37.76■■■■□ 3.63
LINC01138-205ENST00000614292 SMARCA2P51531 1590 aa37.74■■■■□ 3.63
LINC01138-205ENST00000614292 HMGXB3Q12766 1538 aa37.7■■■■□ 3.63
LINC01138-205ENST00000614292 PEG3Q9GZU2 1588 aa37.62■■■■□ 3.61
LINC01138-205ENST00000614292 MROH2BQ7Z745 1585 aa37.52■■■■□ 3.6
LINC01138-205ENST00000614292 BAZ1BQ9UIG0 1483 aaKnown RBP37.44■■■■□ 3.58
LINC01138-205ENST00000614292 NESP48681 1621 aa37.18■■■■□ 3.54
LINC01138-205ENST00000614292 ERCC6Q03468 1493 aa37.13■■■■□ 3.53
LINC01138-205ENST00000614292 WIZO95785 1651 aa37.08■■■■□ 3.53
LINC01138-205ENST00000614292 CUX2O14529 1486 aa37.06■■■■□ 3.52
LINC01138-205ENST00000614292 LAMC3Q9Y6N6 1575 aa37■■■■□ 3.51
LINC01138-205ENST00000614292 RSF1Q96T23 1441 aaPredicted RBP36.86■■■■□ 3.49
LINC01138-205ENST00000614292 THOC2Q8NI27 1593 aaKnown RBP36.8■■■■□ 3.48
LINC01138-205ENST00000614292 KIF21AQ7Z4S6 1674 aa36.75■■■■□ 3.47
LINC01138-205ENST00000614292 CADPSQ9ULU8 1353 aa36.74■■■■□ 3.47
LINC01138-205ENST00000614292 PDS5BQ9NTI5 1447 aa36.7■■■■□ 3.47
LINC01138-205ENST00000614292 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
LINC01138-205ENST00000614292 DNAJC5Q9H3Z4 198 aa36.59■■■■□ 3.45
LINC01138-205ENST00000614292 CFTRP13569 1480 aa36.44■■■■□ 3.42
LINC01138-205ENST00000614292 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
LINC01138-205ENST00000614292 WDR62O43379 1518 aa36.36■■■■□ 3.41
LINC01138-205ENST00000614292 FANCD2Q9BXW9 1451 aa36.31■■■■□ 3.4
LINC01138-205ENST00000614292 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
LINC01138-205ENST00000614292 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
LINC01138-205ENST00000614292 PRDM2Q13029 1718 aa36.16■■■■□ 3.38
LINC01138-205ENST00000614292 URB2Q14146 1524 aaKnown RBP36.04■■■■□ 3.36
LINC01138-205ENST00000614292 TOPBP1Q92547 1522 aa35.69■■■■□ 3.3
LINC01138-205ENST00000614292 ABCC8Q09428 1581 aa35.62■■■■□ 3.29
LINC01138-205ENST00000614292 DNMBPQ6XZF7 1577 aa35.6■■■■□ 3.29
LINC01138-205ENST00000614292 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
LINC01138-205ENST00000614292 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
LINC01138-205ENST00000614292 TARBP1Q13395 1621 aaKnown RBP35.41■■■■□ 3.26
LINC01138-205ENST00000614292 POLA1P09884 1462 aaPredicted RBP35.36■■■■□ 3.25
LINC01138-205ENST00000614292 EIF4G3O43432 1585 aaKnown RBP35.36■■■■□ 3.25
LINC01138-205ENST00000614292 OSCARQ8IYS5 282 aa35.32■■■■□ 3.24
LINC01138-205ENST00000614292 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
LINC01138-205ENST00000614292 CUX1P39880 1505 aa35.23■■■■□ 3.23
LINC01138-205ENST00000614292 AQRO60306 1485 aaKnown RBP eCLIP35.2■■■■□ 3.23
LINC01138-205ENST00000614292 RAD54L2Q9Y4B4 1467 aa35.19■■■■□ 3.22
LINC01138-205ENST00000614292 FGD5Q6ZNL6 1462 aa35.16■■■■□ 3.22
LINC01138-205ENST00000614292 SOGA1O94964 1423 aa35.14■■■■□ 3.22
LINC01138-205ENST00000614292 WDR97A6NE52 1622 aa35.07■■■■□ 3.21
LINC01138-205ENST00000614292 CHD1O14646 1710 aa35.03■■■■□ 3.2
LINC01138-205ENST00000614292 TDRD9Q8NDG6 1382 aaKnown RBP35.01■■■■□ 3.2
LINC01138-205ENST00000614292 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
LINC01138-205ENST00000614292 RIMBP3CA6NJZ7 1639 aa34.94■■■■□ 3.18
LINC01138-205ENST00000614292 RIMBP3BA6NNM3 1639 aa34.94■■■■□ 3.18
LINC01138-205ENST00000614292 RIMBP3Q9UFD9 1639 aa34.94■■■■□ 3.18
LINC01138-205ENST00000614292 SNAPC4Q5SXM2 1469 aa34.86■■■■□ 3.17
LINC01138-205ENST00000614292 ARHGEF11O15085 1522 aa34.85■■■■□ 3.17
LINC01138-205ENST00000614292 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
LINC01138-205ENST00000614292 GRIN2BQ13224 1484 aa34.83■■■■□ 3.17
LINC01138-205ENST00000614292 MAGI1Q96QZ7 1491 aaPredicted RBP34.82■■■■□ 3.16
LINC01138-205ENST00000614292 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
LINC01138-205ENST00000614292 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
LINC01138-205ENST00000614292 ABCA5Q8WWZ7 1642 aa34.77■■■■□ 3.16
LINC01138-205ENST00000614292 PBRM1Q86U86 1689 aa34.76■■■■□ 3.16
LINC01138-205ENST00000614292 GAPVD1Q14C86 1478 aa34.74■■■■□ 3.15
LINC01138-205ENST00000614292 FBLN2P98095 1184 aa34.74■■■■□ 3.15
LINC01138-205ENST00000614292 SYNJ1O43426 1573 aa34.74■■■■□ 3.15
LINC01138-205ENST00000614292 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
LINC01138-205ENST00000614292 SYNJ2O15056 1496 aa34.68■■■■□ 3.14
LINC01138-205ENST00000614292 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
LINC01138-205ENST00000614292 CHMP7Q8WUX9 453 aaPredicted RBP34.6■■■■□ 3.13
LINC01138-205ENST00000614292 ARAP1Q96P48 1450 aa34.55■■■■□ 3.12
LINC01138-205ENST00000614292 ADAMTS12P58397 1594 aa34.46■■■■□ 3.11
LINC01138-205ENST00000614292 CYB5RLQ6IPT4 315 aa34.44■■■■□ 3.1
LINC01138-205ENST00000614292 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
LINC01138-205ENST00000614292 GRIN2AQ12879 1464 aa34.39■■■■□ 3.1
LINC01138-205ENST00000614292 FHAD1B1AJZ9 1412 aa34.33■■■■□ 3.09
LINC01138-205ENST00000614292 NUP160Q12769 1436 aa34.31■■■■□ 3.08
LINC01138-205ENST00000614292 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
LINC01138-205ENST00000614292 SHROOM2Q13796 1616 aa34.16■■■■□ 3.06
LINC01138-205ENST00000614292 ERCC6L2Q5T890 1561 aa34.14■■■■□ 3.06
LINC01138-205ENST00000614292 KIF27Q86VH2 1401 aa34.01■■■■□ 3.03
LINC01138-205ENST00000614292 IGF1RP08069 1367 aa34■■■■□ 3.03
LINC01138-205ENST00000614292 RUSC2Q8N2Y8 1516 aa33.98■■■■□ 3.03
LINC01138-205ENST00000614292 CUL7Q14999 1698 aa33.96■■■■□ 3.03
LINC01138-205ENST00000614292 TRHP20396 242 aaPredicted RBP33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms