RNA–Protein interactions for RNA: ENST00000613900.1

AP003419.3-201, humanhuman

TSL 3 BASIC

Gene AP003419.3, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003419.3-201ENST00000613900 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
AP003419.3-201ENST00000613900 ABCC9O60706 1549 aa25.96■■□□□ 1.75
AP003419.3-201ENST00000613900 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
AP003419.3-201ENST00000613900 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
AP003419.3-201ENST00000613900 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
AP003419.3-201ENST00000613900 NACADO15069 1562 aa24.37■■□□□ 1.49
AP003419.3-201ENST00000613900 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
AP003419.3-201ENST00000613900 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
AP003419.3-201ENST00000613900 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
AP003419.3-201ENST00000613900 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
AP003419.3-201ENST00000613900 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
AP003419.3-201ENST00000613900 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
AP003419.3-201ENST00000613900 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
AP003419.3-201ENST00000613900 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
AP003419.3-201ENST00000613900 ZCCHC6Q5VYS8 1495 aaKnown RBP23.48■■□□□ 1.35
AP003419.3-201ENST00000613900 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
AP003419.3-201ENST00000613900 EIF4G1Q04637 1599 aaKnown RBP23.39■■□□□ 1.33
AP003419.3-201ENST00000613900 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
AP003419.3-201ENST00000613900 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
AP003419.3-201ENST00000613900 CUX2O14529 1486 aa22.65■■□□□ 1.22
AP003419.3-201ENST00000613900 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
AP003419.3-201ENST00000613900 ERCC6Q03468 1493 aa22.41■■□□□ 1.18
AP003419.3-201ENST00000613900 HMGXB3Q12766 1538 aa22.35■■□□□ 1.17
AP003419.3-201ENST00000613900 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
AP003419.3-201ENST00000613900 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
AP003419.3-201ENST00000613900 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
AP003419.3-201ENST00000613900 NESP48681 1621 aa22.22■■□□□ 1.15
AP003419.3-201ENST00000613900 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
AP003419.3-201ENST00000613900 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
AP003419.3-201ENST00000613900 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
AP003419.3-201ENST00000613900 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
AP003419.3-201ENST00000613900 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
AP003419.3-201ENST00000613900 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
AP003419.3-201ENST00000613900 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
AP003419.3-201ENST00000613900 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
AP003419.3-201ENST00000613900 WDR62O43379 1518 aa21.78■■□□□ 1.08
AP003419.3-201ENST00000613900 MRC2Q9UBG0 1479 aa21.75■■□□□ 1.07
AP003419.3-201ENST00000613900 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
AP003419.3-201ENST00000613900 TRIM41Q8WV44 630 aa21.65■■□□□ 1.06
AP003419.3-201ENST00000613900 WIZO95785 1651 aa21.56■■□□□ 1.04
AP003419.3-201ENST00000613900 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
AP003419.3-201ENST00000613900 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
AP003419.3-201ENST00000613900 CFTRP13569 1480 aa21.45■■□□□ 1.02
AP003419.3-201ENST00000613900 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
AP003419.3-201ENST00000613900 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
AP003419.3-201ENST00000613900 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
AP003419.3-201ENST00000613900 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
AP003419.3-201ENST00000613900 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
AP003419.3-201ENST00000613900 PRDM2Q13029 1718 aa21.3■■□□□ 1
AP003419.3-201ENST00000613900 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
AP003419.3-201ENST00000613900 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
AP003419.3-201ENST00000613900 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
AP003419.3-201ENST00000613900 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
AP003419.3-201ENST00000613900 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
AP003419.3-201ENST00000613900 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
AP003419.3-201ENST00000613900 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
AP003419.3-201ENST00000613900 CHD1O14646 1710 aa21■□□□□ 0.95
AP003419.3-201ENST00000613900 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
AP003419.3-201ENST00000613900 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
AP003419.3-201ENST00000613900 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
AP003419.3-201ENST00000613900 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
AP003419.3-201ENST00000613900 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
AP003419.3-201ENST00000613900 AQRO60306 1485 aaKnown RBP eCLIP20.85■□□□□ 0.93
AP003419.3-201ENST00000613900 CYB5RLQ6IPT4 315 aa20.84■□□□□ 0.93
AP003419.3-201ENST00000613900 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
AP003419.3-201ENST00000613900 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
AP003419.3-201ENST00000613900 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
AP003419.3-201ENST00000613900 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
AP003419.3-201ENST00000613900 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
AP003419.3-201ENST00000613900 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
AP003419.3-201ENST00000613900 SYNJ1O43426 1573 aa20.64■□□□□ 0.9
AP003419.3-201ENST00000613900 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.89
AP003419.3-201ENST00000613900 SOGA1O94964 1423 aa20.62■□□□□ 0.89
AP003419.3-201ENST00000613900 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
AP003419.3-201ENST00000613900 FBLN2P98095 1184 aa20.61■□□□□ 0.89
AP003419.3-201ENST00000613900 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
AP003419.3-201ENST00000613900 SYNJ2O15056 1496 aa20.56■□□□□ 0.88
AP003419.3-201ENST00000613900 CUX1P39880 1505 aa20.56■□□□□ 0.88
AP003419.3-201ENST00000613900 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
AP003419.3-201ENST00000613900 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
AP003419.3-201ENST00000613900 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
AP003419.3-201ENST00000613900 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
AP003419.3-201ENST00000613900 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
AP003419.3-201ENST00000613900 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
AP003419.3-201ENST00000613900 ERCC6L2Q5T890 1561 aa20.37■□□□□ 0.85
AP003419.3-201ENST00000613900 AEBP2Q6ZN18 517 aaPredicted RBP20.36■□□□□ 0.85
AP003419.3-201ENST00000613900 SHROOM2Q13796 1616 aa20.33■□□□□ 0.84
AP003419.3-201ENST00000613900 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
AP003419.3-201ENST00000613900 ADAMTS12P58397 1594 aa20.31■□□□□ 0.84
AP003419.3-201ENST00000613900 CEP170Q5SW79 1584 aa20.3■□□□□ 0.84
AP003419.3-201ENST00000613900 NUP160Q12769 1436 aa20.3■□□□□ 0.84
AP003419.3-201ENST00000613900 KIF13AQ9H1H9 1805 aa20.27■□□□□ 0.84
AP003419.3-201ENST00000613900 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
AP003419.3-201ENST00000613900 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
AP003419.3-201ENST00000613900 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
AP003419.3-201ENST00000613900 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
AP003419.3-201ENST00000613900 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
AP003419.3-201ENST00000613900 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
AP003419.3-201ENST00000613900 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
AP003419.3-201ENST00000613900 ABCC10Q5T3U5 1492 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms