RNA–Protein interactions for RNA: ENST00000613848.1

RN7SL428P-201, Transcript of RNA, 7SL, cytoplasmic 428, pseudogene, humanhuman

BASIC

Gene RN7SL428P, Length 247 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL428P-201ENST00000613848 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
RN7SL428P-201ENST00000613848 ABCC9O60706 1549 aa22.49■■□□□ 1.19
RN7SL428P-201ENST00000613848 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.15
RN7SL428P-201ENST00000613848 DNAJC5BQ9UF47 199 aa21.29■■□□□ 1
RN7SL428P-201ENST00000613848 RB1CC1Q8TDY2 1594 aa21.27■■□□□ 1
RN7SL428P-201ENST00000613848 NACADO15069 1562 aa21.06■□□□□ 0.96
RN7SL428P-201ENST00000613848 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
RN7SL428P-201ENST00000613848 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
RN7SL428P-201ENST00000613848 UNC13AQ9UPW8 1703 aa20.78■□□□□ 0.92
RN7SL428P-201ENST00000613848 MYO15BQ96JP2 1530 aa20.67■□□□□ 0.9
RN7SL428P-201ENST00000613848 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
RN7SL428P-201ENST00000613848 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
RN7SL428P-201ENST00000613848 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
RN7SL428P-201ENST00000613848 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
RN7SL428P-201ENST00000613848 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
RN7SL428P-201ENST00000613848 CC2D2AQ9P2K1 1620 aa20.28■□□□□ 0.84
RN7SL428P-201ENST00000613848 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
RN7SL428P-201ENST00000613848 EIF4G1Q04637 1599 aaKnown RBP20.17■□□□□ 0.82
RN7SL428P-201ENST00000613848 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
RN7SL428P-201ENST00000613848 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
RN7SL428P-201ENST00000613848 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
RN7SL428P-201ENST00000613848 CUX2O14529 1486 aa19.42■□□□□ 0.7
RN7SL428P-201ENST00000613848 ATAD2BQ9ULI0 1458 aa19.39■□□□□ 0.69
RN7SL428P-201ENST00000613848 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
RN7SL428P-201ENST00000613848 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
RN7SL428P-201ENST00000613848 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
RN7SL428P-201ENST00000613848 NESP48681 1621 aa19.25■□□□□ 0.67
RN7SL428P-201ENST00000613848 BAZ1BQ9UIG0 1483 aaKnown RBP19.19■□□□□ 0.66
RN7SL428P-201ENST00000613848 BAZ1AQ9NRL2 1556 aaPredicted RBP19.18■□□□□ 0.66
RN7SL428P-201ENST00000613848 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
RN7SL428P-201ENST00000613848 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
RN7SL428P-201ENST00000613848 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
RN7SL428P-201ENST00000613848 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
RN7SL428P-201ENST00000613848 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
RN7SL428P-201ENST00000613848 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
RN7SL428P-201ENST00000613848 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
RN7SL428P-201ENST00000613848 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
RN7SL428P-201ENST00000613848 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
RN7SL428P-201ENST00000613848 WIZO95785 1651 aa18.8■□□□□ 0.6
RN7SL428P-201ENST00000613848 WDR62O43379 1518 aa18.74■□□□□ 0.59
RN7SL428P-201ENST00000613848 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
RN7SL428P-201ENST00000613848 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
RN7SL428P-201ENST00000613848 CFTRP13569 1480 aa18.59■□□□□ 0.57
RN7SL428P-201ENST00000613848 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
RN7SL428P-201ENST00000613848 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
RN7SL428P-201ENST00000613848 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
RN7SL428P-201ENST00000613848 URB2Q14146 1524 aaKnown RBP18.51■□□□□ 0.55
RN7SL428P-201ENST00000613848 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
RN7SL428P-201ENST00000613848 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
RN7SL428P-201ENST00000613848 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
RN7SL428P-201ENST00000613848 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
RN7SL428P-201ENST00000613848 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
RN7SL428P-201ENST00000613848 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
RN7SL428P-201ENST00000613848 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
RN7SL428P-201ENST00000613848 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
RN7SL428P-201ENST00000613848 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
RN7SL428P-201ENST00000613848 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
RN7SL428P-201ENST00000613848 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
RN7SL428P-201ENST00000613848 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
RN7SL428P-201ENST00000613848 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
RN7SL428P-201ENST00000613848 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5
RN7SL428P-201ENST00000613848 FBLN2P98095 1184 aa18.14■□□□□ 0.49
RN7SL428P-201ENST00000613848 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
RN7SL428P-201ENST00000613848 CHD1O14646 1710 aa18.11■□□□□ 0.49
RN7SL428P-201ENST00000613848 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
RN7SL428P-201ENST00000613848 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
RN7SL428P-201ENST00000613848 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
RN7SL428P-201ENST00000613848 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
RN7SL428P-201ENST00000613848 SOGA1O94964 1423 aa18.03■□□□□ 0.48
RN7SL428P-201ENST00000613848 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
RN7SL428P-201ENST00000613848 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
RN7SL428P-201ENST00000613848 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
RN7SL428P-201ENST00000613848 CHMP7Q8WUX9 453 aaPredicted RBP17.94■□□□□ 0.46
RN7SL428P-201ENST00000613848 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
RN7SL428P-201ENST00000613848 CUX1P39880 1505 aa17.88■□□□□ 0.45
RN7SL428P-201ENST00000613848 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
RN7SL428P-201ENST00000613848 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
RN7SL428P-201ENST00000613848 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
RN7SL428P-201ENST00000613848 MAGI1Q96QZ7 1491 aaPredicted RBP17.87■□□□□ 0.45
RN7SL428P-201ENST00000613848 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
RN7SL428P-201ENST00000613848 GAPVD1Q14C86 1478 aa17.78■□□□□ 0.44
RN7SL428P-201ENST00000613848 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
RN7SL428P-201ENST00000613848 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
RN7SL428P-201ENST00000613848 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
RN7SL428P-201ENST00000613848 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
RN7SL428P-201ENST00000613848 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
RN7SL428P-201ENST00000613848 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
RN7SL428P-201ENST00000613848 WRNQ14191 1432 aaPredicted RBP eCLIP17.63■□□□□ 0.41
RN7SL428P-201ENST00000613848 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
RN7SL428P-201ENST00000613848 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
RN7SL428P-201ENST00000613848 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
RN7SL428P-201ENST00000613848 NUP160Q12769 1436 aa17.56■□□□□ 0.4
RN7SL428P-201ENST00000613848 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
RN7SL428P-201ENST00000613848 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
RN7SL428P-201ENST00000613848 BIVM-ERCC5R4GMW8 1640 aa17.53■□□□□ 0.4
RN7SL428P-201ENST00000613848 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
RN7SL428P-201ENST00000613848 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
RN7SL428P-201ENST00000613848 PRG4Q92954 1404 aaPredicted RBP17.46■□□□□ 0.39
RN7SL428P-201ENST00000613848 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
RN7SL428P-201ENST00000613848 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms