RNA–Protein interactions for RNA: ENST00000613790.4

LINC01660-201, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 4

Gene LINC01660, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-201ENST00000613790 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
LINC01660-201ENST00000613790 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
LINC01660-201ENST00000613790 ABCC9O60706 1549 aa21■□□□□ 0.95
LINC01660-201ENST00000613790 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
LINC01660-201ENST00000613790 NACADO15069 1562 aa20.32■□□□□ 0.84
LINC01660-201ENST00000613790 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
LINC01660-201ENST00000613790 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.84
LINC01660-201ENST00000613790 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
LINC01660-201ENST00000613790 DCAF8L2P0C7V8 631 aa20.08■□□□□ 0.81
LINC01660-201ENST00000613790 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
LINC01660-201ENST00000613790 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
LINC01660-201ENST00000613790 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
LINC01660-201ENST00000613790 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
LINC01660-201ENST00000613790 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
LINC01660-201ENST00000613790 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
LINC01660-201ENST00000613790 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
LINC01660-201ENST00000613790 CC2D2AQ9P2K1 1620 aa19.04■□□□□ 0.64
LINC01660-201ENST00000613790 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
LINC01660-201ENST00000613790 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
LINC01660-201ENST00000613790 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
LINC01660-201ENST00000613790 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
LINC01660-201ENST00000613790 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
LINC01660-201ENST00000613790 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
LINC01660-201ENST00000613790 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
LINC01660-201ENST00000613790 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
LINC01660-201ENST00000613790 MROH2BQ7Z745 1585 aa18.7■□□□□ 0.58
LINC01660-201ENST00000613790 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
LINC01660-201ENST00000613790 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
LINC01660-201ENST00000613790 WIZO95785 1651 aa18.49■□□□□ 0.55
LINC01660-201ENST00000613790 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
LINC01660-201ENST00000613790 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
LINC01660-201ENST00000613790 NESP48681 1621 aa18.18■□□□□ 0.5
LINC01660-201ENST00000613790 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
LINC01660-201ENST00000613790 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
LINC01660-201ENST00000613790 PDS5BQ9NTI5 1447 aa18.09■□□□□ 0.49
LINC01660-201ENST00000613790 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
LINC01660-201ENST00000613790 CFTRP13569 1480 aa18.08■□□□□ 0.49
LINC01660-201ENST00000613790 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
LINC01660-201ENST00000613790 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
LINC01660-201ENST00000613790 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
LINC01660-201ENST00000613790 CUX2O14529 1486 aa17.99■□□□□ 0.47
LINC01660-201ENST00000613790 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
LINC01660-201ENST00000613790 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
LINC01660-201ENST00000613790 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
LINC01660-201ENST00000613790 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
LINC01660-201ENST00000613790 WDR62O43379 1518 aa17.88■□□□□ 0.45
LINC01660-201ENST00000613790 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
LINC01660-201ENST00000613790 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
LINC01660-201ENST00000613790 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
LINC01660-201ENST00000613790 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
LINC01660-201ENST00000613790 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
LINC01660-201ENST00000613790 CUX1P39880 1505 aa17.56■□□□□ 0.4
LINC01660-201ENST00000613790 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
LINC01660-201ENST00000613790 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
LINC01660-201ENST00000613790 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
LINC01660-201ENST00000613790 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
LINC01660-201ENST00000613790 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
LINC01660-201ENST00000613790 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
LINC01660-201ENST00000613790 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
LINC01660-201ENST00000613790 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
LINC01660-201ENST00000613790 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
LINC01660-201ENST00000613790 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
LINC01660-201ENST00000613790 SOGA1O94964 1423 aa17.41■□□□□ 0.38
LINC01660-201ENST00000613790 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
LINC01660-201ENST00000613790 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
LINC01660-201ENST00000613790 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC01660-201ENST00000613790 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
LINC01660-201ENST00000613790 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
LINC01660-201ENST00000613790 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
LINC01660-201ENST00000613790 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
LINC01660-201ENST00000613790 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
LINC01660-201ENST00000613790 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
LINC01660-201ENST00000613790 DNAJC5Q9H3Z4 198 aa17.23■□□□□ 0.35
LINC01660-201ENST00000613790 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
LINC01660-201ENST00000613790 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
LINC01660-201ENST00000613790 CHD1O14646 1710 aa17.16■□□□□ 0.34
LINC01660-201ENST00000613790 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
LINC01660-201ENST00000613790 CHIC1Q5VXU3 224 aa17.14■□□□□ 0.33
LINC01660-201ENST00000613790 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
LINC01660-201ENST00000613790 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
LINC01660-201ENST00000613790 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
LINC01660-201ENST00000613790 FHAD1B1AJZ9 1412 aa17.07■□□□□ 0.32
LINC01660-201ENST00000613790 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
LINC01660-201ENST00000613790 CUL7Q14999 1698 aa17.04■□□□□ 0.32
LINC01660-201ENST00000613790 FBLN2P98095 1184 aa17.04■□□□□ 0.32
LINC01660-201ENST00000613790 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
LINC01660-201ENST00000613790 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
LINC01660-201ENST00000613790 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
LINC01660-201ENST00000613790 TRIM41Q8WV44 630 aa17■□□□□ 0.31
LINC01660-201ENST00000613790 NUP160Q12769 1436 aa16.97■□□□□ 0.31
LINC01660-201ENST00000613790 IGF1RP08069 1367 aa16.97■□□□□ 0.31
LINC01660-201ENST00000613790 CEP170Q5SW79 1584 aa16.95■□□□□ 0.3
LINC01660-201ENST00000613790 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
LINC01660-201ENST00000613790 RIMBP3CA6NJZ7 1639 aa16.92■□□□□ 0.3
LINC01660-201ENST00000613790 RIMBP3BA6NNM3 1639 aa16.92■□□□□ 0.3
LINC01660-201ENST00000613790 RIMBP3Q9UFD9 1639 aa16.92■□□□□ 0.3
LINC01660-201ENST00000613790 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
LINC01660-201ENST00000613790 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
LINC01660-201ENST00000613790 EEA1Q15075 1411 aa16.87■□□□□ 0.29
LINC01660-201ENST00000613790 SHROOM2Q13796 1616 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms