RNA–Protein interactions for RNA: ENST00000613776.1

ACACA-229, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 2

Gene ACACA, Length 1,372 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-229ENST00000613776 NISCHQ9Y2I1 1504 aa26.89■■□□□ 1.89
ACACA-229ENST00000613776 ABCC9O60706 1549 aa25.85■■□□□ 1.73
ACACA-229ENST00000613776 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
ACACA-229ENST00000613776 CCDC180Q9P1Z9 1646 aa24.56■■□□□ 1.52
ACACA-229ENST00000613776 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
ACACA-229ENST00000613776 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
ACACA-229ENST00000613776 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
ACACA-229ENST00000613776 NACADO15069 1562 aa23.53■■□□□ 1.36
ACACA-229ENST00000613776 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
ACACA-229ENST00000613776 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
ACACA-229ENST00000613776 BICRAQ9NZM4 1560 aa23.37■■□□□ 1.33
ACACA-229ENST00000613776 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
ACACA-229ENST00000613776 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
ACACA-229ENST00000613776 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
ACACA-229ENST00000613776 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
ACACA-229ENST00000613776 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
ACACA-229ENST00000613776 CUX2O14529 1486 aa22.69■■□□□ 1.22
ACACA-229ENST00000613776 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
ACACA-229ENST00000613776 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
ACACA-229ENST00000613776 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
ACACA-229ENST00000613776 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
ACACA-229ENST00000613776 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
ACACA-229ENST00000613776 NESP48681 1621 aa21.88■■□□□ 1.09
ACACA-229ENST00000613776 THOC2Q8NI27 1593 aaKnown RBP21.81■■□□□ 1.08
ACACA-229ENST00000613776 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
ACACA-229ENST00000613776 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
ACACA-229ENST00000613776 ATAD2BQ9ULI0 1458 aa21.55■■□□□ 1.04
ACACA-229ENST00000613776 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
ACACA-229ENST00000613776 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
ACACA-229ENST00000613776 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
ACACA-229ENST00000613776 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
ACACA-229ENST00000613776 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
ACACA-229ENST00000613776 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
ACACA-229ENST00000613776 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
ACACA-229ENST00000613776 RIMBP3CA6NJZ7 1639 aa21.34■■□□□ 1.01
ACACA-229ENST00000613776 RIMBP3BA6NNM3 1639 aa21.34■■□□□ 1.01
ACACA-229ENST00000613776 RIMBP3Q9UFD9 1639 aa21.34■■□□□ 1.01
ACACA-229ENST00000613776 TRHP20396 242 aaPredicted RBP21.31■■□□□ 1
ACACA-229ENST00000613776 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
ACACA-229ENST00000613776 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
ACACA-229ENST00000613776 WDR62O43379 1518 aa21.25■□□□□ 0.99
ACACA-229ENST00000613776 SMARCA4P51532 1647 aa21.22■□□□□ 0.99
ACACA-229ENST00000613776 ARHGEF11O15085 1522 aa21.15■□□□□ 0.98
ACACA-229ENST00000613776 CYB5RLQ6IPT4 315 aa21.14■□□□□ 0.98
ACACA-229ENST00000613776 CADPSQ9ULU8 1353 aa21.07■□□□□ 0.96
ACACA-229ENST00000613776 CEP164Q9UPV0 1460 aa20.97■□□□□ 0.95
ACACA-229ENST00000613776 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
ACACA-229ENST00000613776 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
ACACA-229ENST00000613776 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
ACACA-229ENST00000613776 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
ACACA-229ENST00000613776 URB2Q14146 1524 aaKnown RBP20.75■□□□□ 0.91
ACACA-229ENST00000613776 MROH2BQ7Z745 1585 aa20.73■□□□□ 0.91
ACACA-229ENST00000613776 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
ACACA-229ENST00000613776 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
ACACA-229ENST00000613776 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
ACACA-229ENST00000613776 CFTRP13569 1480 aa20.57■□□□□ 0.88
ACACA-229ENST00000613776 CHD1O14646 1710 aa20.56■□□□□ 0.88
ACACA-229ENST00000613776 FBLN2P98095 1184 aa20.54■□□□□ 0.88
ACACA-229ENST00000613776 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
ACACA-229ENST00000613776 WIZO95785 1651 aa20.43■□□□□ 0.86
ACACA-229ENST00000613776 AQRO60306 1485 aaKnown RBP eCLIP20.39■□□□□ 0.854e-7■■■■■ 45.4
ACACA-229ENST00000613776 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
ACACA-229ENST00000613776 CLASP1Q7Z460 1538 aa20.29■□□□□ 0.84
ACACA-229ENST00000613776 KDM4FA0A1W2PPD8 638 aa20.22■□□□□ 0.83
ACACA-229ENST00000613776 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
ACACA-229ENST00000613776 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
ACACA-229ENST00000613776 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
ACACA-229ENST00000613776 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
ACACA-229ENST00000613776 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
ACACA-229ENST00000613776 ABCC8Q09428 1581 aa20.13■□□□□ 0.81
ACACA-229ENST00000613776 SNAPC4Q5SXM2 1469 aa20.13■□□□□ 0.81
ACACA-229ENST00000613776 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
ACACA-229ENST00000613776 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
ACACA-229ENST00000613776 TOP2AP11388 1531 aaKnown RBP20.05■□□□□ 0.8
ACACA-229ENST00000613776 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
ACACA-229ENST00000613776 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.8
ACACA-229ENST00000613776 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
ACACA-229ENST00000613776 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
ACACA-229ENST00000613776 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
ACACA-229ENST00000613776 SOGA1O94964 1423 aa19.95■□□□□ 0.78
ACACA-229ENST00000613776 SYNJ2O15056 1496 aa19.94■□□□□ 0.78
ACACA-229ENST00000613776 FAM69CQ0P6D2 419 aa19.89■□□□□ 0.77
ACACA-229ENST00000613776 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
ACACA-229ENST00000613776 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
ACACA-229ENST00000613776 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
ACACA-229ENST00000613776 HECW2Q9P2P5 1572 aa19.85■□□□□ 0.77
ACACA-229ENST00000613776 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
ACACA-229ENST00000613776 KDM6BO15054 1643 aa19.84■□□□□ 0.77
ACACA-229ENST00000613776 ABCC10Q5T3U5 1492 aa19.78■□□□□ 0.76
ACACA-229ENST00000613776 CEP170Q5SW79 1584 aa19.76■□□□□ 0.75
ACACA-229ENST00000613776 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
ACACA-229ENST00000613776 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
ACACA-229ENST00000613776 LMTK3Q96Q04 1460 aa19.73■□□□□ 0.75
ACACA-229ENST00000613776 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
ACACA-229ENST00000613776 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
ACACA-229ENST00000613776 NPM1P06748 294 aaKnown RBP eCLIP19.65■□□□□ 0.74
ACACA-229ENST00000613776 TSPOAP1O95153 1857 aa19.64■□□□□ 0.73
ACACA-229ENST00000613776 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
ACACA-229ENST00000613776 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
ACACA-229ENST00000613776 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms