RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
SRGAP2C-204ENST00000613462 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
SRGAP2C-204ENST00000613462 ABCC9O60706 1549 aa26.85■■□□□ 1.89
SRGAP2C-204ENST00000613462 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
SRGAP2C-204ENST00000613462 NACADO15069 1562 aa25.88■■□□□ 1.73
SRGAP2C-204ENST00000613462 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
SRGAP2C-204ENST00000613462 MYO15BQ96JP2 1530 aa25.83■■□□□ 1.72
SRGAP2C-204ENST00000613462 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
SRGAP2C-204ENST00000613462 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
SRGAP2C-204ENST00000613462 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
SRGAP2C-204ENST00000613462 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
SRGAP2C-204ENST00000613462 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
SRGAP2C-204ENST00000613462 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
SRGAP2C-204ENST00000613462 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
SRGAP2C-204ENST00000613462 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
SRGAP2C-204ENST00000613462 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
SRGAP2C-204ENST00000613462 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
SRGAP2C-204ENST00000613462 CECR2Q9BXF3 1484 aa24.24■■□□□ 1.47
SRGAP2C-204ENST00000613462 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
SRGAP2C-204ENST00000613462 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
SRGAP2C-204ENST00000613462 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
SRGAP2C-204ENST00000613462 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
SRGAP2C-204ENST00000613462 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
SRGAP2C-204ENST00000613462 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
SRGAP2C-204ENST00000613462 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
SRGAP2C-204ENST00000613462 NCAPD3P42695 1498 aa23.8■■□□□ 1.4
SRGAP2C-204ENST00000613462 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
SRGAP2C-204ENST00000613462 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
SRGAP2C-204ENST00000613462 WIZO95785 1651 aa23.73■■□□□ 1.39
SRGAP2C-204ENST00000613462 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
SRGAP2C-204ENST00000613462 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
SRGAP2C-204ENST00000613462 CUX2O14529 1486 aa23.37■■□□□ 1.33
SRGAP2C-204ENST00000613462 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
SRGAP2C-204ENST00000613462 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
SRGAP2C-204ENST00000613462 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
SRGAP2C-204ENST00000613462 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
SRGAP2C-204ENST00000613462 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
SRGAP2C-204ENST00000613462 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
SRGAP2C-204ENST00000613462 NESP48681 1621 aa23.08■■□□□ 1.28
SRGAP2C-204ENST00000613462 CFTRP13569 1480 aa23.05■■□□□ 1.28
SRGAP2C-204ENST00000613462 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
SRGAP2C-204ENST00000613462 KIF21AQ7Z4S6 1674 aa22.96■■□□□ 1.27
SRGAP2C-204ENST00000613462 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
SRGAP2C-204ENST00000613462 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
SRGAP2C-204ENST00000613462 CEP164Q9UPV0 1460 aa22.83■■□□□ 1.25
SRGAP2C-204ENST00000613462 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
SRGAP2C-204ENST00000613462 WDR62O43379 1518 aa22.68■■□□□ 1.22
SRGAP2C-204ENST00000613462 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
SRGAP2C-204ENST00000613462 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
SRGAP2C-204ENST00000613462 URB2Q14146 1524 aaKnown RBP22.58■■□□□ 1.21
SRGAP2C-204ENST00000613462 DNMBPQ6XZF7 1577 aa22.58■■□□□ 1.2
SRGAP2C-204ENST00000613462 TOPBP1Q92547 1522 aa22.52■■□□□ 1.2
SRGAP2C-204ENST00000613462 CUX1P39880 1505 aa22.46■■□□□ 1.19
SRGAP2C-204ENST00000613462 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
SRGAP2C-204ENST00000613462 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
SRGAP2C-204ENST00000613462 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
SRGAP2C-204ENST00000613462 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
SRGAP2C-204ENST00000613462 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
SRGAP2C-204ENST00000613462 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
SRGAP2C-204ENST00000613462 IFT140Q96RY7 1462 aa22.33■■□□□ 1.16
SRGAP2C-204ENST00000613462 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
SRGAP2C-204ENST00000613462 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
SRGAP2C-204ENST00000613462 SOGA1O94964 1423 aa22.23■■□□□ 1.15
SRGAP2C-204ENST00000613462 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
SRGAP2C-204ENST00000613462 EIF4G3O43432 1585 aaKnown RBP22.17■■□□□ 1.14
SRGAP2C-204ENST00000613462 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
SRGAP2C-204ENST00000613462 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
SRGAP2C-204ENST00000613462 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
SRGAP2C-204ENST00000613462 ABCA5Q8WWZ7 1642 aa22.09■■□□□ 1.13
SRGAP2C-204ENST00000613462 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
SRGAP2C-204ENST00000613462 RIMBP3CA6NJZ7 1639 aa22.05■■□□□ 1.12
SRGAP2C-204ENST00000613462 RIMBP3BA6NNM3 1639 aa22.05■■□□□ 1.12
SRGAP2C-204ENST00000613462 RIMBP3Q9UFD9 1639 aa22.05■■□□□ 1.12
SRGAP2C-204ENST00000613462 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
SRGAP2C-204ENST00000613462 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
SRGAP2C-204ENST00000613462 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
SRGAP2C-204ENST00000613462 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SRGAP2C-204ENST00000613462 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
SRGAP2C-204ENST00000613462 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
SRGAP2C-204ENST00000613462 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
SRGAP2C-204ENST00000613462 ARHGEF11O15085 1522 aa21.89■■□□□ 1.09
SRGAP2C-204ENST00000613462 SNAPC4Q5SXM2 1469 aa21.89■■□□□ 1.09
SRGAP2C-204ENST00000613462 CHD1O14646 1710 aa21.88■■□□□ 1.09
SRGAP2C-204ENST00000613462 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
SRGAP2C-204ENST00000613462 ADAMTS12P58397 1594 aa21.85■■□□□ 1.09
SRGAP2C-204ENST00000613462 CUL7Q14999 1698 aa21.85■■□□□ 1.09
SRGAP2C-204ENST00000613462 SYNJ2O15056 1496 aa21.82■■□□□ 1.08
SRGAP2C-204ENST00000613462 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
SRGAP2C-204ENST00000613462 EEA1Q15075 1411 aa21.74■■□□□ 1.07
SRGAP2C-204ENST00000613462 IGF1RP08069 1367 aa21.74■■□□□ 1.07
SRGAP2C-204ENST00000613462 RUSC2Q8N2Y8 1516 aa21.71■■□□□ 1.07
SRGAP2C-204ENST00000613462 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
SRGAP2C-204ENST00000613462 CHMP7Q8WUX9 453 aaPredicted RBP21.7■■□□□ 1.06
SRGAP2C-204ENST00000613462 FBLN2P98095 1184 aa21.67■■□□□ 1.06
SRGAP2C-204ENST00000613462 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
SRGAP2C-204ENST00000613462 CYB5RLQ6IPT4 315 aa21.65■■□□□ 1.06
SRGAP2C-204ENST00000613462 CARMIL1Q5VZK9 1371 aa21.63■■□□□ 1.05
SRGAP2C-204ENST00000613462 CLASP1Q7Z460 1538 aa21.59■■□□□ 1.05
SRGAP2C-204ENST00000613462 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
SRGAP2C-204ENST00000613462 CEP170Q5SW79 1584 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms