RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 NISCHQ9Y2I1 1504 aa23.85■■□□□ 1.41
LINC01138-204ENST00000613452 CCDC180Q9P1Z9 1646 aa21.28■■□□□ 1
LINC01138-204ENST00000613452 ABCC9O60706 1549 aa21.24■□□□□ 0.99
LINC01138-204ENST00000613452 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
LINC01138-204ENST00000613452 NACADO15069 1562 aa20.21■□□□□ 0.83
LINC01138-204ENST00000613452 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
LINC01138-204ENST00000613452 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
LINC01138-204ENST00000613452 DNAJC5BQ9UF47 199 aa19.99■□□□□ 0.79
LINC01138-204ENST00000613452 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
LINC01138-204ENST00000613452 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
LINC01138-204ENST00000613452 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
LINC01138-204ENST00000613452 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
LINC01138-204ENST00000613452 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
LINC01138-204ENST00000613452 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
LINC01138-204ENST00000613452 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
LINC01138-204ENST00000613452 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
LINC01138-204ENST00000613452 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
LINC01138-204ENST00000613452 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
LINC01138-204ENST00000613452 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
LINC01138-204ENST00000613452 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
LINC01138-204ENST00000613452 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
LINC01138-204ENST00000613452 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
LINC01138-204ENST00000613452 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
LINC01138-204ENST00000613452 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
LINC01138-204ENST00000613452 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
LINC01138-204ENST00000613452 PEG3Q9GZU2 1588 aa18.4■□□□□ 0.54
LINC01138-204ENST00000613452 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
LINC01138-204ENST00000613452 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
LINC01138-204ENST00000613452 CUX2O14529 1486 aa18.37■□□□□ 0.53
LINC01138-204ENST00000613452 ERCC6Q03468 1493 aa18.36■□□□□ 0.53
LINC01138-204ENST00000613452 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
LINC01138-204ENST00000613452 NESP48681 1621 aa18.24■□□□□ 0.51
LINC01138-204ENST00000613452 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
LINC01138-204ENST00000613452 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
LINC01138-204ENST00000613452 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
LINC01138-204ENST00000613452 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
LINC01138-204ENST00000613452 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
LINC01138-204ENST00000613452 WIZO95785 1651 aa18.04■□□□□ 0.48
LINC01138-204ENST00000613452 THOC2Q8NI27 1593 aaKnown RBP18■□□□□ 0.47
LINC01138-204ENST00000613452 CFTRP13569 1480 aa17.92■□□□□ 0.46
LINC01138-204ENST00000613452 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
LINC01138-204ENST00000613452 KIF21AQ7Z4S6 1674 aa17.92■□□□□ 0.46
LINC01138-204ENST00000613452 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
LINC01138-204ENST00000613452 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
LINC01138-204ENST00000613452 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
LINC01138-204ENST00000613452 WDR62O43379 1518 aa17.85■□□□□ 0.45
LINC01138-204ENST00000613452 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
LINC01138-204ENST00000613452 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
LINC01138-204ENST00000613452 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
LINC01138-204ENST00000613452 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
LINC01138-204ENST00000613452 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
LINC01138-204ENST00000613452 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
LINC01138-204ENST00000613452 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
LINC01138-204ENST00000613452 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
LINC01138-204ENST00000613452 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
LINC01138-204ENST00000613452 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
LINC01138-204ENST00000613452 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC01138-204ENST00000613452 SOGA1O94964 1423 aa17.34■□□□□ 0.37
LINC01138-204ENST00000613452 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
LINC01138-204ENST00000613452 TARBP1Q13395 1621 aaKnown RBP17.32■□□□□ 0.36
LINC01138-204ENST00000613452 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
LINC01138-204ENST00000613452 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.35
LINC01138-204ENST00000613452 RAD54L2Q9Y4B4 1467 aa17.26■□□□□ 0.35
LINC01138-204ENST00000613452 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
LINC01138-204ENST00000613452 FBLN2P98095 1184 aa17.25■□□□□ 0.35
LINC01138-204ENST00000613452 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
LINC01138-204ENST00000613452 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
LINC01138-204ENST00000613452 CHMP7Q8WUX9 453 aaPredicted RBP17.2■□□□□ 0.34
LINC01138-204ENST00000613452 CUX1P39880 1505 aa17.2■□□□□ 0.34
LINC01138-204ENST00000613452 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
LINC01138-204ENST00000613452 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
LINC01138-204ENST00000613452 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
LINC01138-204ENST00000613452 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
LINC01138-204ENST00000613452 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
LINC01138-204ENST00000613452 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
LINC01138-204ENST00000613452 MAGI1Q96QZ7 1491 aaPredicted RBP17.14■□□□□ 0.33
LINC01138-204ENST00000613452 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
LINC01138-204ENST00000613452 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
LINC01138-204ENST00000613452 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
LINC01138-204ENST00000613452 CHD1O14646 1710 aa17.08■□□□□ 0.32
LINC01138-204ENST00000613452 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
LINC01138-204ENST00000613452 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
LINC01138-204ENST00000613452 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
LINC01138-204ENST00000613452 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
LINC01138-204ENST00000613452 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
LINC01138-204ENST00000613452 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
LINC01138-204ENST00000613452 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
LINC01138-204ENST00000613452 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
LINC01138-204ENST00000613452 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
LINC01138-204ENST00000613452 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
LINC01138-204ENST00000613452 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
LINC01138-204ENST00000613452 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
LINC01138-204ENST00000613452 NUP160Q12769 1436 aa16.87■□□□□ 0.29
LINC01138-204ENST00000613452 ERICH3Q5RHP9 1530 aa16.86■□□□□ 0.29
LINC01138-204ENST00000613452 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
LINC01138-204ENST00000613452 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
LINC01138-204ENST00000613452 CEP170Q5SW79 1584 aa16.76■□□□□ 0.27
LINC01138-204ENST00000613452 IGF1RP08069 1367 aa16.76■□□□□ 0.27
LINC01138-204ENST00000613452 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
LINC01138-204ENST00000613452 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms