RNA–Protein interactions for RNA: ENST00000613045.1

AP001043.1-206, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 730 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-206ENST00000613045 NISCHQ9Y2I1 1504 aa31.36■■■□□ 2.61
AP001043.1-206ENST00000613045 ABCC9O60706 1549 aa29.27■■■□□ 2.28
AP001043.1-206ENST00000613045 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
AP001043.1-206ENST00000613045 DNAJC5BQ9UF47 199 aa28.22■■■□□ 2.11
AP001043.1-206ENST00000613045 RB1CC1Q8TDY2 1594 aa27.42■■□□□ 1.98
AP001043.1-206ENST00000613045 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
AP001043.1-206ENST00000613045 NACADO15069 1562 aa27.03■■□□□ 1.92
AP001043.1-206ENST00000613045 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
AP001043.1-206ENST00000613045 DCAF8L2P0C7V8 631 aa26.88■■□□□ 1.89
AP001043.1-206ENST00000613045 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
AP001043.1-206ENST00000613045 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.82
AP001043.1-206ENST00000613045 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
AP001043.1-206ENST00000613045 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
AP001043.1-206ENST00000613045 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
AP001043.1-206ENST00000613045 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
AP001043.1-206ENST00000613045 SHROOM4Q9ULL8 1493 aa26.05■■□□□ 1.76
AP001043.1-206ENST00000613045 SCRIBQ14160 1630 aa25.97■■□□□ 1.75
AP001043.1-206ENST00000613045 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
AP001043.1-206ENST00000613045 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
AP001043.1-206ENST00000613045 CUX2O14529 1486 aa25.38■■□□□ 1.65
AP001043.1-206ENST00000613045 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
AP001043.1-206ENST00000613045 NESP48681 1621 aa24.97■■□□□ 1.59
AP001043.1-206ENST00000613045 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
AP001043.1-206ENST00000613045 TRIM41Q8WV44 630 aa24.92■■□□□ 1.58
AP001043.1-206ENST00000613045 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.57
AP001043.1-206ENST00000613045 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
AP001043.1-206ENST00000613045 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
AP001043.1-206ENST00000613045 SMARCA2P51531 1590 aa24.66■■□□□ 1.54
AP001043.1-206ENST00000613045 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
AP001043.1-206ENST00000613045 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
AP001043.1-206ENST00000613045 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
AP001043.1-206ENST00000613045 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
AP001043.1-206ENST00000613045 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
AP001043.1-206ENST00000613045 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
AP001043.1-206ENST00000613045 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.49
AP001043.1-206ENST00000613045 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
AP001043.1-206ENST00000613045 WDR62O43379 1518 aa24.24■■□□□ 1.47
AP001043.1-206ENST00000613045 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
AP001043.1-206ENST00000613045 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
AP001043.1-206ENST00000613045 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
AP001043.1-206ENST00000613045 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
AP001043.1-206ENST00000613045 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
AP001043.1-206ENST00000613045 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
AP001043.1-206ENST00000613045 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
AP001043.1-206ENST00000613045 WIZO95785 1651 aa23.95■■□□□ 1.43
AP001043.1-206ENST00000613045 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
AP001043.1-206ENST00000613045 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
AP001043.1-206ENST00000613045 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
AP001043.1-206ENST00000613045 CFTRP13569 1480 aa23.76■■□□□ 1.39
AP001043.1-206ENST00000613045 CYB5RLQ6IPT4 315 aa23.72■■□□□ 1.39
AP001043.1-206ENST00000613045 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
AP001043.1-206ENST00000613045 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
AP001043.1-206ENST00000613045 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
AP001043.1-206ENST00000613045 ARAP1Q96P48 1450 aa23.55■■□□□ 1.36
AP001043.1-206ENST00000613045 CHD1O14646 1710 aa23.54■■□□□ 1.36
AP001043.1-206ENST00000613045 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
AP001043.1-206ENST00000613045 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
AP001043.1-206ENST00000613045 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
AP001043.1-206ENST00000613045 TOP2AP11388 1531 aaKnown RBP23.46■■□□□ 1.35
AP001043.1-206ENST00000613045 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
AP001043.1-206ENST00000613045 RSF1Q96T23 1441 aaPredicted RBP23.41■■□□□ 1.34
AP001043.1-206ENST00000613045 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.34
AP001043.1-206ENST00000613045 FBLN2P98095 1184 aa23.35■■□□□ 1.33
AP001043.1-206ENST00000613045 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
AP001043.1-206ENST00000613045 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
AP001043.1-206ENST00000613045 DNMBPQ6XZF7 1577 aa23.25■■□□□ 1.31
AP001043.1-206ENST00000613045 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
AP001043.1-206ENST00000613045 CLASP1Q7Z460 1538 aa23.16■■□□□ 1.3
AP001043.1-206ENST00000613045 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.29
AP001043.1-206ENST00000613045 POLA1P09884 1462 aaPredicted RBP23.13■■□□□ 1.29
AP001043.1-206ENST00000613045 TDRD9Q8NDG6 1382 aaKnown RBP23.11■■□□□ 1.29
AP001043.1-206ENST00000613045 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.29
AP001043.1-206ENST00000613045 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
AP001043.1-206ENST00000613045 SOGA1O94964 1423 aa23■■□□□ 1.27
AP001043.1-206ENST00000613045 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
AP001043.1-206ENST00000613045 GAPVD1Q14C86 1478 aa22.95■■□□□ 1.26
AP001043.1-206ENST00000613045 FGD5Q6ZNL6 1462 aa22.9■■□□□ 1.26
AP001043.1-206ENST00000613045 MAGI1Q96QZ7 1491 aaPredicted RBP22.9■■□□□ 1.26
AP001043.1-206ENST00000613045 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
AP001043.1-206ENST00000613045 SYNJ2O15056 1496 aa22.86■■□□□ 1.25
AP001043.1-206ENST00000613045 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
AP001043.1-206ENST00000613045 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
AP001043.1-206ENST00000613045 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
AP001043.1-206ENST00000613045 CUX1P39880 1505 aa22.79■■□□□ 1.24
AP001043.1-206ENST00000613045 KIF13AQ9H1H9 1805 aa22.79■■□□□ 1.24
AP001043.1-206ENST00000613045 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
AP001043.1-206ENST00000613045 ILDR1Q86SU0 546 aaPredicted RBP22.65■■□□□ 1.22
AP001043.1-206ENST00000613045 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
AP001043.1-206ENST00000613045 GRIN2AQ12879 1464 aa22.59■■□□□ 1.21
AP001043.1-206ENST00000613045 KDM4FA0A1W2PPD8 638 aa22.56■■□□□ 1.2
AP001043.1-206ENST00000613045 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
AP001043.1-206ENST00000613045 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
AP001043.1-206ENST00000613045 NUP160Q12769 1436 aa22.53■■□□□ 1.2
AP001043.1-206ENST00000613045 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
AP001043.1-206ENST00000613045 FAM69CQ0P6D2 419 aa22.46■■□□□ 1.19
AP001043.1-206ENST00000613045 TSPOAP1O95153 1857 aa22.42■■□□□ 1.18
AP001043.1-206ENST00000613045 ABCC10Q5T3U5 1492 aa22.41■■□□□ 1.18
AP001043.1-206ENST00000613045 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
AP001043.1-206ENST00000613045 DIP2BQ9P265 1576 aa22.38■■□□□ 1.17
AP001043.1-206ENST00000613045 KDM6BO15054 1643 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms