RNA–Protein interactions for RNA: ENST00000613006.4

CYFIP1-206, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 4

Gene CYFIP1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-206ENST00000613006 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
CYFIP1-206ENST00000613006 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
CYFIP1-206ENST00000613006 ABCC9O60706 1549 aa28.79■■■□□ 2.2
CYFIP1-206ENST00000613006 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
CYFIP1-206ENST00000613006 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
CYFIP1-206ENST00000613006 NACADO15069 1562 aa27.34■■□□□ 1.97
CYFIP1-206ENST00000613006 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
CYFIP1-206ENST00000613006 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
CYFIP1-206ENST00000613006 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
CYFIP1-206ENST00000613006 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
CYFIP1-206ENST00000613006 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
CYFIP1-206ENST00000613006 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
CYFIP1-206ENST00000613006 BICRAQ9NZM4 1560 aa26.49■■□□□ 1.83
CYFIP1-206ENST00000613006 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
CYFIP1-206ENST00000613006 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
CYFIP1-206ENST00000613006 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
CYFIP1-206ENST00000613006 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
CYFIP1-206ENST00000613006 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
CYFIP1-206ENST00000613006 NCAPD3P42695 1498 aa25.23■■□□□ 1.63
CYFIP1-206ENST00000613006 ATAD2BQ9ULI0 1458 aa25.17■■□□□ 1.62
CYFIP1-206ENST00000613006 SMARCA2P51531 1590 aa25.15■■□□□ 1.62
CYFIP1-206ENST00000613006 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
CYFIP1-206ENST00000613006 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
CYFIP1-206ENST00000613006 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
CYFIP1-206ENST00000613006 HMGXB3Q12766 1538 aa25■■□□□ 1.59
CYFIP1-206ENST00000613006 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
CYFIP1-206ENST00000613006 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
CYFIP1-206ENST00000613006 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
CYFIP1-206ENST00000613006 CUX2O14529 1486 aa24.74■■□□□ 1.55
CYFIP1-206ENST00000613006 NESP48681 1621 aa24.72■■□□□ 1.55
CYFIP1-206ENST00000613006 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
CYFIP1-206ENST00000613006 LAMC3Q9Y6N6 1575 aa24.62■■□□□ 1.53
CYFIP1-206ENST00000613006 DNAJC5Q9H3Z4 198 aa24.6■■□□□ 1.53
CYFIP1-206ENST00000613006 WIZO95785 1651 aa24.57■■□□□ 1.52
CYFIP1-206ENST00000613006 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
CYFIP1-206ENST00000613006 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
CYFIP1-206ENST00000613006 KIF21AQ7Z4S6 1674 aa24.33■■□□□ 1.49
CYFIP1-206ENST00000613006 THOC2Q8NI27 1593 aaKnown RBP24.32■■□□□ 1.48
CYFIP1-206ENST00000613006 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
CYFIP1-206ENST00000613006 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
CYFIP1-206ENST00000613006 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
CYFIP1-206ENST00000613006 CFTRP13569 1480 aa24.23■■□□□ 1.47
CYFIP1-206ENST00000613006 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
CYFIP1-206ENST00000613006 WDR62O43379 1518 aa24.12■■□□□ 1.45
CYFIP1-206ENST00000613006 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
CYFIP1-206ENST00000613006 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
CYFIP1-206ENST00000613006 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
CYFIP1-206ENST00000613006 PRDM2Q13029 1718 aa23.86■■□□□ 1.41
CYFIP1-206ENST00000613006 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
CYFIP1-206ENST00000613006 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
CYFIP1-206ENST00000613006 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
CYFIP1-206ENST00000613006 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
CYFIP1-206ENST00000613006 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
CYFIP1-206ENST00000613006 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
CYFIP1-206ENST00000613006 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
CYFIP1-206ENST00000613006 FBLN2P98095 1184 aa23.57■■□□□ 1.36
CYFIP1-206ENST00000613006 SOGA1O94964 1423 aa23.55■■□□□ 1.36
CYFIP1-206ENST00000613006 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.35
CYFIP1-206ENST00000613006 POLA1P09884 1462 aaPredicted RBP23.5■■□□□ 1.35
CYFIP1-206ENST00000613006 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
CYFIP1-206ENST00000613006 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
CYFIP1-206ENST00000613006 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
CYFIP1-206ENST00000613006 TARBP1Q13395 1621 aaKnown RBP23.42■■□□□ 1.34
CYFIP1-206ENST00000613006 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
CYFIP1-206ENST00000613006 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
CYFIP1-206ENST00000613006 CUX1P39880 1505 aa23.36■■□□□ 1.33
CYFIP1-206ENST00000613006 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
CYFIP1-206ENST00000613006 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
CYFIP1-206ENST00000613006 GRIN2BQ13224 1484 aa23.27■■□□□ 1.32
CYFIP1-206ENST00000613006 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
CYFIP1-206ENST00000613006 RIMBP3CA6NJZ7 1639 aa23.23■■□□□ 1.31
CYFIP1-206ENST00000613006 RIMBP3BA6NNM3 1639 aa23.23■■□□□ 1.31
CYFIP1-206ENST00000613006 RIMBP3Q9UFD9 1639 aa23.23■■□□□ 1.31
CYFIP1-206ENST00000613006 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
CYFIP1-206ENST00000613006 CHD1O14646 1710 aa23.22■■□□□ 1.31
CYFIP1-206ENST00000613006 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
CYFIP1-206ENST00000613006 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
CYFIP1-206ENST00000613006 ARHGEF11O15085 1522 aa23.21■■□□□ 1.31
CYFIP1-206ENST00000613006 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
CYFIP1-206ENST00000613006 SYNJ2O15056 1496 aa23.14■■□□□ 1.29
CYFIP1-206ENST00000613006 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
CYFIP1-206ENST00000613006 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
CYFIP1-206ENST00000613006 TRHP20396 242 aaPredicted RBP23.05■■□□□ 1.28
CYFIP1-206ENST00000613006 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
CYFIP1-206ENST00000613006 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
CYFIP1-206ENST00000613006 ABCA5Q8WWZ7 1642 aa22.99■■□□□ 1.27
CYFIP1-206ENST00000613006 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
CYFIP1-206ENST00000613006 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
CYFIP1-206ENST00000613006 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
CYFIP1-206ENST00000613006 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
CYFIP1-206ENST00000613006 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
CYFIP1-206ENST00000613006 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
CYFIP1-206ENST00000613006 NUP160Q12769 1436 aa22.8■■□□□ 1.24
CYFIP1-206ENST00000613006 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
CYFIP1-206ENST00000613006 JPH4Q96JJ6 628 aa22.78■■□□□ 1.24
CYFIP1-206ENST00000613006 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
CYFIP1-206ENST00000613006 IGF1RP08069 1367 aa22.7■■□□□ 1.22
CYFIP1-206ENST00000613006 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
CYFIP1-206ENST00000613006 NPM1P06748 294 aaKnown RBP eCLIP22.68■■□□□ 1.22
CYFIP1-206ENST00000613006 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms