RNA–Protein interactions for RNA: ENST00000612985.1

RNVU1-4-201, Transcript of RNA, variant U1 small nuclear 4, humanhuman

BASIC

Gene RNVU1-4, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-4-201ENST00000612985 NISCHQ9Y2I1 1504 aa7.93□□□□□ -1.14
RNVU1-4-201ENST00000612985 CCDC180Q9P1Z9 1646 aa7.07□□□□□ -1.28
RNVU1-4-201ENST00000612985 ABCC9O60706 1549 aa6.89□□□□□ -1.31
RNVU1-4-201ENST00000612985 NACADO15069 1562 aa6.64□□□□□ -1.35
RNVU1-4-201ENST00000612985 RB1CC1Q8TDY2 1594 aa6.64□□□□□ -1.35
RNVU1-4-201ENST00000612985 MYO15BQ96JP2 1530 aa6.63□□□□□ -1.35
RNVU1-4-201ENST00000612985 ZCCHC6Q5VYS8 1495 aaKnown RBP6.61□□□□□ -1.35
RNVU1-4-201ENST00000612985 DCAF1Q9Y4B6 1507 aa6.59□□□□□ -1.35
RNVU1-4-201ENST00000612985 UNC13AQ9UPW8 1703 aa6.54□□□□□ -1.36
RNVU1-4-201ENST00000612985 DCAF8L2P0C7V8 631 aa6.5□□□□□ -1.37
RNVU1-4-201ENST00000612985 BICRAQ9NZM4 1560 aa6.49□□□□□ -1.37
RNVU1-4-201ENST00000612985 PABPN1Q86U42 306 aaKnown RBP eCLIP6.41□□□□□ -1.38
RNVU1-4-201ENST00000612985 SCRIBQ14160 1630 aa6.4□□□□□ -1.38
RNVU1-4-201ENST00000612985 SHROOM4Q9ULL8 1493 aa6.4□□□□□ -1.39
RNVU1-4-201ENST00000612985 DNAJC5BQ9UF47 199 aa6.39□□□□□ -1.39
RNVU1-4-201ENST00000612985 EIF4G1Q04637 1599 aaKnown RBP6.29□□□□□ -1.4
RNVU1-4-201ENST00000612985 AEBP2Q6ZN18 517 aaPredicted RBP6.29□□□□□ -1.4
RNVU1-4-201ENST00000612985 CC2D2AQ9P2K1 1620 aa6.26□□□□□ -1.41
RNVU1-4-201ENST00000612985 CHIC1Q5VXU3 224 aa6.21□□□□□ -1.42
RNVU1-4-201ENST00000612985 CECR2Q9BXF3 1484 aa6.2□□□□□ -1.42
RNVU1-4-201ENST00000612985 SMARCA4P51532 1647 aa6.16□□□□□ -1.42
RNVU1-4-201ENST00000612985 NCAPD3P42695 1498 aa6.14□□□□□ -1.43
RNVU1-4-201ENST00000612985 PEG3Q9GZU2 1588 aa6.14□□□□□ -1.43
RNVU1-4-201ENST00000612985 ATAD2BQ9ULI0 1458 aa6.13□□□□□ -1.43
RNVU1-4-201ENST00000612985 BAZ1AQ9NRL2 1556 aaPredicted RBP6.13□□□□□ -1.43
RNVU1-4-201ENST00000612985 MROH2BQ7Z745 1585 aa6.11□□□□□ -1.43
RNVU1-4-201ENST00000612985 HMGXB3Q12766 1538 aa6.1□□□□□ -1.43
RNVU1-4-201ENST00000612985 PELP1Q8IZL8 1130 aaKnown RBP6.1□□□□□ -1.43
RNVU1-4-201ENST00000612985 SMARCA2P51531 1590 aa6.1□□□□□ -1.43
RNVU1-4-201ENST00000612985 BAZ1BQ9UIG0 1483 aaKnown RBP6.04□□□□□ -1.44
RNVU1-4-201ENST00000612985 WIZO95785 1651 aa6.04□□□□□ -1.44
RNVU1-4-201ENST00000612985 RSF1Q96T23 1441 aaPredicted RBP6.03□□□□□ -1.44
RNVU1-4-201ENST00000612985 HRCP23327 699 aa6□□□□□ -1.45
RNVU1-4-201ENST00000612985 NESP48681 1621 aa5.98□□□□□ -1.45
RNVU1-4-201ENST00000612985 MYT1Q01538 1121 aa5.97□□□□□ -1.45
RNVU1-4-201ENST00000612985 TOP2AP11388 1531 aaKnown RBP5.97□□□□□ -1.45
RNVU1-4-201ENST00000612985 LAMC3Q9Y6N6 1575 aa5.97□□□□□ -1.45
RNVU1-4-201ENST00000612985 THOC2Q8NI27 1593 aaKnown RBP5.93□□□□□ -1.46
RNVU1-4-201ENST00000612985 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
RNVU1-4-201ENST00000612985 KIF21AQ7Z4S6 1674 aa5.92□□□□□ -1.46
RNVU1-4-201ENST00000612985 CFTRP13569 1480 aa5.91□□□□□ -1.46
RNVU1-4-201ENST00000612985 CUX2O14529 1486 aa5.9□□□□□ -1.46
RNVU1-4-201ENST00000612985 CCDC88BA6NC98 1476 aa5.9□□□□□ -1.47
RNVU1-4-201ENST00000612985 ERCC6Q03468 1493 aa5.9□□□□□ -1.47
RNVU1-4-201ENST00000612985 PDS5BQ9NTI5 1447 aa5.89□□□□□ -1.47
RNVU1-4-201ENST00000612985 PRDM2Q13029 1718 aa5.88□□□□□ -1.47
RNVU1-4-201ENST00000612985 WDR62O43379 1518 aa5.86□□□□□ -1.47
RNVU1-4-201ENST00000612985 FANCD2Q9BXW9 1451 aa5.86□□□□□ -1.47
RNVU1-4-201ENST00000612985 MRC2Q9UBG0 1479 aa5.84□□□□□ -1.47
RNVU1-4-201ENST00000612985 CEP164Q9UPV0 1460 aa5.84□□□□□ -1.47
RNVU1-4-201ENST00000612985 URB2Q14146 1524 aaKnown RBP5.83□□□□□ -1.48
RNVU1-4-201ENST00000612985 ZEB1P37275 1124 aaPredicted RBP5.82□□□□□ -1.48
RNVU1-4-201ENST00000612985 TOPBP1Q92547 1522 aa5.78□□□□□ -1.48
RNVU1-4-201ENST00000612985 DNMBPQ6XZF7 1577 aa5.76□□□□□ -1.49
RNVU1-4-201ENST00000612985 SUPT5HO00267 1087 aaKnown RBP5.76□□□□□ -1.49
RNVU1-4-201ENST00000612985 ABCC8Q09428 1581 aa5.76□□□□□ -1.49
RNVU1-4-201ENST00000612985 DNAJC5Q9H3Z4 198 aa5.75□□□□□ -1.49
RNVU1-4-201ENST00000612985 TARBP1Q13395 1621 aaKnown RBP5.74□□□□□ -1.49
RNVU1-4-201ENST00000612985 CUX1P39880 1505 aa5.74□□□□□ -1.49
RNVU1-4-201ENST00000612985 POLA1P09884 1462 aaPredicted RBP5.73□□□□□ -1.49
RNVU1-4-201ENST00000612985 PCGF6Q9BYE7 350 aa5.73□□□□□ -1.49
RNVU1-4-201ENST00000612985 IFT140Q96RY7 1462 aa5.72□□□□□ -1.49
RNVU1-4-201ENST00000612985 ZNF608Q9ULD9 1512 aaPredicted RBP5.72□□□□□ -1.49
RNVU1-4-201ENST00000612985 TRIM26Q12899 539 aaPredicted RBP5.7□□□□□ -1.5
RNVU1-4-201ENST00000612985 EIF4G3O43432 1585 aaKnown RBP5.7□□□□□ -1.5
RNVU1-4-201ENST00000612985 FGD5Q6ZNL6 1462 aa5.7□□□□□ -1.5
RNVU1-4-201ENST00000612985 WDR97A6NE52 1622 aa5.7□□□□□ -1.5
RNVU1-4-201ENST00000612985 BIVM-ERCC5R4GMW8 1640 aa5.69□□□□□ -1.5
RNVU1-4-201ENST00000612985 RAD54L2Q9Y4B4 1467 aa5.69□□□□□ -1.5
RNVU1-4-201ENST00000612985 SYNJ1O43426 1573 aa5.67□□□□□ -1.5
RNVU1-4-201ENST00000612985 TOP2BQ02880 1626 aa5.67□□□□□ -1.5
RNVU1-4-201ENST00000612985 SOGA1O94964 1423 aa5.67□□□□□ -1.5
RNVU1-4-201ENST00000612985 AQRO60306 1485 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNVU1-4-201ENST00000612985 TTBK1Q5TCY1 1321 aaPredicted RBP5.66□□□□□ -1.5
RNVU1-4-201ENST00000612985 WRNQ14191 1432 aaPredicted RBP eCLIP5.65□□□□□ -1.5
RNVU1-4-201ENST00000612985 ABCA10Q8WWZ4 1543 aa5.65□□□□□ -1.5
RNVU1-4-201ENST00000612985 ABCA5Q8WWZ7 1642 aa5.65□□□□□ -1.51
RNVU1-4-201ENST00000612985 TDRD9Q8NDG6 1382 aaKnown RBP5.64□□□□□ -1.51
RNVU1-4-201ENST00000612985 CHD1O14646 1710 aa5.63□□□□□ -1.51
RNVU1-4-201ENST00000612985 PPARGC1BQ86YN6 1023 aaKnown RBP5.63□□□□□ -1.51
RNVU1-4-201ENST00000612985 PBRM1Q86U86 1689 aa5.63□□□□□ -1.51
RNVU1-4-201ENST00000612985 GRIN2BQ13224 1484 aa5.62□□□□□ -1.51
RNVU1-4-201ENST00000612985 GAPVD1Q14C86 1478 aa5.62□□□□□ -1.51
RNVU1-4-201ENST00000612985 MAGI1Q96QZ7 1491 aaPredicted RBP5.62□□□□□ -1.51
RNVU1-4-201ENST00000612985 SNAPC4Q5SXM2 1469 aa5.61□□□□□ -1.51
RNVU1-4-201ENST00000612985 OSCARQ8IYS5 282 aa5.61□□□□□ -1.51
RNVU1-4-201ENST00000612985 CENPBP07199 599 aaPredicted RBP5.6□□□□□ -1.51
RNVU1-4-201ENST00000612985 CLASP1Q7Z460 1538 aa5.59□□□□□ -1.51
RNVU1-4-201ENST00000612985 SYNJ2O15056 1496 aa5.59□□□□□ -1.51
RNVU1-4-201ENST00000612985 SCAF1Q9H7N4 1312 aaKnown RBP5.59□□□□□ -1.51
RNVU1-4-201ENST00000612985 ERICH3Q5RHP9 1530 aa5.58□□□□□ -1.52
RNVU1-4-201ENST00000612985 RIMBP3CA6NJZ7 1639 aa5.58□□□□□ -1.52
RNVU1-4-201ENST00000612985 RIMBP3BA6NNM3 1639 aa5.58□□□□□ -1.52
RNVU1-4-201ENST00000612985 RIMBP3Q9UFD9 1639 aa5.58□□□□□ -1.52
RNVU1-4-201ENST00000612985 ADAMTS12P58397 1594 aa5.58□□□□□ -1.52
RNVU1-4-201ENST00000612985 ARHGEF11O15085 1522 aa5.57□□□□□ -1.52
RNVU1-4-201ENST00000612985 GRIN2AQ12879 1464 aa5.56□□□□□ -1.52
RNVU1-4-201ENST00000612985 NUP160Q12769 1436 aa5.56□□□□□ -1.52
RNVU1-4-201ENST00000612985 FHAD1B1AJZ9 1412 aa5.55□□□□□ -1.52
RNVU1-4-201ENST00000612985 CEP170Q5SW79 1584 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms