RNA–Protein interactions for RNA: ENST00000612957.4

TPTE-203, Transcript of transmembrane phosphatase with tensin homology, humanhuman

TSL 5

Gene TPTE, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-203ENST00000612957 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
TPTE-203ENST00000612957 ABCC9O60706 1549 aa22.64■■□□□ 1.21
TPTE-203ENST00000612957 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
TPTE-203ENST00000612957 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
TPTE-203ENST00000612957 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
TPTE-203ENST00000612957 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
TPTE-203ENST00000612957 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
TPTE-203ENST00000612957 NACADO15069 1562 aa21.1■□□□□ 0.97
TPTE-203ENST00000612957 BICRAQ9NZM4 1560 aa20.75■□□□□ 0.91
TPTE-203ENST00000612957 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
TPTE-203ENST00000612957 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
TPTE-203ENST00000612957 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
TPTE-203ENST00000612957 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
TPTE-203ENST00000612957 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
TPTE-203ENST00000612957 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
TPTE-203ENST00000612957 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
TPTE-203ENST00000612957 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
TPTE-203ENST00000612957 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
TPTE-203ENST00000612957 DNAJC5Q9H3Z4 198 aa20.02■□□□□ 0.8
TPTE-203ENST00000612957 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
TPTE-203ENST00000612957 CUX2O14529 1486 aa19.5■□□□□ 0.71
TPTE-203ENST00000612957 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
TPTE-203ENST00000612957 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
TPTE-203ENST00000612957 NESP48681 1621 aa19.4■□□□□ 0.7
TPTE-203ENST00000612957 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
TPTE-203ENST00000612957 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
TPTE-203ENST00000612957 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
TPTE-203ENST00000612957 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
TPTE-203ENST00000612957 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
TPTE-203ENST00000612957 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
TPTE-203ENST00000612957 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
TPTE-203ENST00000612957 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
TPTE-203ENST00000612957 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
TPTE-203ENST00000612957 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
TPTE-203ENST00000612957 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
TPTE-203ENST00000612957 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
TPTE-203ENST00000612957 KIF21AQ7Z4S6 1674 aa18.95■□□□□ 0.62
TPTE-203ENST00000612957 MRC2Q9UBG0 1479 aa18.87■□□□□ 0.61
TPTE-203ENST00000612957 WIZO95785 1651 aa18.81■□□□□ 0.6
TPTE-203ENST00000612957 WDR62O43379 1518 aa18.79■□□□□ 0.6
TPTE-203ENST00000612957 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
TPTE-203ENST00000612957 FANCD2Q9BXW9 1451 aa18.73■□□□□ 0.59
TPTE-203ENST00000612957 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
TPTE-203ENST00000612957 CFTRP13569 1480 aa18.69■□□□□ 0.58
TPTE-203ENST00000612957 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
TPTE-203ENST00000612957 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
TPTE-203ENST00000612957 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
TPTE-203ENST00000612957 ZNF608Q9ULD9 1512 aaPredicted RBP18.46■□□□□ 0.55
TPTE-203ENST00000612957 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
TPTE-203ENST00000612957 CYB5RLQ6IPT4 315 aa18.4■□□□□ 0.54
TPTE-203ENST00000612957 IFT140Q96RY7 1462 aa18.39■□□□□ 0.53
TPTE-203ENST00000612957 RIMBP3CA6NJZ7 1639 aa18.36■□□□□ 0.53
TPTE-203ENST00000612957 RIMBP3BA6NNM3 1639 aa18.36■□□□□ 0.53
TPTE-203ENST00000612957 RIMBP3Q9UFD9 1639 aa18.36■□□□□ 0.53
TPTE-203ENST00000612957 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
TPTE-203ENST00000612957 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
TPTE-203ENST00000612957 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.522e-9■■■■□ 23.9
TPTE-203ENST00000612957 FBLN2P98095 1184 aa18.3■□□□□ 0.52
TPTE-203ENST00000612957 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
TPTE-203ENST00000612957 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
TPTE-203ENST00000612957 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
TPTE-203ENST00000612957 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
TPTE-203ENST00000612957 EIF4G3O43432 1585 aaKnown RBP18.18■□□□□ 0.5
TPTE-203ENST00000612957 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
TPTE-203ENST00000612957 RAD54L2Q9Y4B4 1467 aa18.16■□□□□ 0.5
TPTE-203ENST00000612957 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
TPTE-203ENST00000612957 SOGA1O94964 1423 aa18.15■□□□□ 0.5
TPTE-203ENST00000612957 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
TPTE-203ENST00000612957 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
TPTE-203ENST00000612957 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
TPTE-203ENST00000612957 CHD1O14646 1710 aa18.07■□□□□ 0.48
TPTE-203ENST00000612957 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
TPTE-203ENST00000612957 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
TPTE-203ENST00000612957 CUX1P39880 1505 aa17.94■□□□□ 0.46
TPTE-203ENST00000612957 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
TPTE-203ENST00000612957 GRIN2BQ13224 1484 aa17.92■□□□□ 0.46
TPTE-203ENST00000612957 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
TPTE-203ENST00000612957 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
TPTE-203ENST00000612957 AEBP2Q6ZN18 517 aaPredicted RBP17.86■□□□□ 0.45
TPTE-203ENST00000612957 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
TPTE-203ENST00000612957 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
TPTE-203ENST00000612957 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
TPTE-203ENST00000612957 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
TPTE-203ENST00000612957 ABCA10Q8WWZ4 1543 aa17.75■□□□□ 0.43
TPTE-203ENST00000612957 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
TPTE-203ENST00000612957 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
TPTE-203ENST00000612957 GRIN2AQ12879 1464 aa17.68■□□□□ 0.42
TPTE-203ENST00000612957 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
TPTE-203ENST00000612957 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
TPTE-203ENST00000612957 NUP160Q12769 1436 aa17.64■□□□□ 0.42
TPTE-203ENST00000612957 JPH4Q96JJ6 628 aa17.62■□□□□ 0.41
TPTE-203ENST00000612957 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
TPTE-203ENST00000612957 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
TPTE-203ENST00000612957 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
TPTE-203ENST00000612957 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
TPTE-203ENST00000612957 FAM69CQ0P6D2 419 aa17.53■□□□□ 0.4
TPTE-203ENST00000612957 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
TPTE-203ENST00000612957 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
TPTE-203ENST00000612957 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
TPTE-203ENST00000612957 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms