RNA–Protein interactions for RNA: ENST00000612756.1

MDS2-203, Transcript of myelodysplastic syndrome 2 translocation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MDS2, Length 420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDS2-203ENST00000612756 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
MDS2-203ENST00000612756 CCDC180Q9P1Z9 1646 aa19.92■□□□□ 0.78
MDS2-203ENST00000612756 ZCCHC6Q5VYS8 1495 aaKnown RBP19.18■□□□□ 0.66
MDS2-203ENST00000612756 CHIC1Q5VXU3 224 aa19.14■□□□□ 0.65
MDS2-203ENST00000612756 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
MDS2-203ENST00000612756 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
MDS2-203ENST00000612756 ABCC9O60706 1549 aa18.77■□□□□ 0.6
MDS2-203ENST00000612756 SHROOM4Q9ULL8 1493 aa18.66■□□□□ 0.58
MDS2-203ENST00000612756 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
MDS2-203ENST00000612756 NACADO15069 1562 aa18.51■□□□□ 0.55
MDS2-203ENST00000612756 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
MDS2-203ENST00000612756 RB1CC1Q8TDY2 1594 aa18.34■□□□□ 0.53
MDS2-203ENST00000612756 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
MDS2-203ENST00000612756 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
MDS2-203ENST00000612756 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
MDS2-203ENST00000612756 BICRAQ9NZM4 1560 aa17.82■□□□□ 0.44
MDS2-203ENST00000612756 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
MDS2-203ENST00000612756 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
MDS2-203ENST00000612756 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
MDS2-203ENST00000612756 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
MDS2-203ENST00000612756 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
MDS2-203ENST00000612756 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
MDS2-203ENST00000612756 WIZO95785 1651 aa17.55■□□□□ 0.4
MDS2-203ENST00000612756 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
MDS2-203ENST00000612756 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
MDS2-203ENST00000612756 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
MDS2-203ENST00000612756 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
MDS2-203ENST00000612756 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
MDS2-203ENST00000612756 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
MDS2-203ENST00000612756 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
MDS2-203ENST00000612756 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
MDS2-203ENST00000612756 NCAPD3P42695 1498 aa17.06■□□□□ 0.32
MDS2-203ENST00000612756 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
MDS2-203ENST00000612756 PHF23Q9BUL5 403 aaPredicted RBP16.89■□□□□ 0.29
MDS2-203ENST00000612756 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
MDS2-203ENST00000612756 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
MDS2-203ENST00000612756 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
MDS2-203ENST00000612756 CFTRP13569 1480 aa16.69■□□□□ 0.26
MDS2-203ENST00000612756 WRNQ14191 1432 aaPredicted RBP eCLIP16.66■□□□□ 0.26
MDS2-203ENST00000612756 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
MDS2-203ENST00000612756 CADPSQ9ULU8 1353 aa16.63■□□□□ 0.25
MDS2-203ENST00000612756 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.24
MDS2-203ENST00000612756 LOC105371045A0A1W2PR82 267 aa16.57■□□□□ 0.24
MDS2-203ENST00000612756 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
MDS2-203ENST00000612756 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
MDS2-203ENST00000612756 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
MDS2-203ENST00000612756 NESP48681 1621 aa16.51■□□□□ 0.23
MDS2-203ENST00000612756 CUX1P39880 1505 aa16.5■□□□□ 0.23
MDS2-203ENST00000612756 SOGA1O94964 1423 aa16.49■□□□□ 0.23
MDS2-203ENST00000612756 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
MDS2-203ENST00000612756 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
MDS2-203ENST00000612756 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
MDS2-203ENST00000612756 EEA1Q15075 1411 aa16.44■□□□□ 0.22
MDS2-203ENST00000612756 KIF21AQ7Z4S6 1674 aa16.35■□□□□ 0.21
MDS2-203ENST00000612756 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
MDS2-203ENST00000612756 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
MDS2-203ENST00000612756 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
MDS2-203ENST00000612756 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
MDS2-203ENST00000612756 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.2
MDS2-203ENST00000612756 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
MDS2-203ENST00000612756 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
MDS2-203ENST00000612756 KIF21BO75037 1637 aa16.28■□□□□ 0.2
MDS2-203ENST00000612756 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
MDS2-203ENST00000612756 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
MDS2-203ENST00000612756 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
MDS2-203ENST00000612756 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
MDS2-203ENST00000612756 CUX2O14529 1486 aa16.2■□□□□ 0.18
MDS2-203ENST00000612756 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
MDS2-203ENST00000612756 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
MDS2-203ENST00000612756 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
MDS2-203ENST00000612756 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
MDS2-203ENST00000612756 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
MDS2-203ENST00000612756 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
MDS2-203ENST00000612756 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
MDS2-203ENST00000612756 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
MDS2-203ENST00000612756 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
MDS2-203ENST00000612756 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
MDS2-203ENST00000612756 IGF1RP08069 1367 aa16.09■□□□□ 0.17
MDS2-203ENST00000612756 PLPPR3Q6T4P5 718 aa16.08■□□□□ 0.16
MDS2-203ENST00000612756 WDR62O43379 1518 aa16.07■□□□□ 0.16
MDS2-203ENST00000612756 TARBP1Q13395 1621 aaKnown RBP16.07■□□□□ 0.16
MDS2-203ENST00000612756 ERCC6Q03468 1493 aa16.06■□□□□ 0.16
MDS2-203ENST00000612756 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
MDS2-203ENST00000612756 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
MDS2-203ENST00000612756 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
MDS2-203ENST00000612756 CUL7Q14999 1698 aa16■□□□□ 0.15
MDS2-203ENST00000612756 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
MDS2-203ENST00000612756 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
MDS2-203ENST00000612756 CLIP1P30622 1438 aa15.97■□□□□ 0.15
MDS2-203ENST00000612756 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
MDS2-203ENST00000612756 IFT140Q96RY7 1462 aa15.95■□□□□ 0.14
MDS2-203ENST00000612756 AQRO60306 1485 aaKnown RBP eCLIP15.9■□□□□ 0.14
MDS2-203ENST00000612756 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
MDS2-203ENST00000612756 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
MDS2-203ENST00000612756 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
MDS2-203ENST00000612756 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
MDS2-203ENST00000612756 ARAP1Q96P48 1450 aa15.84■□□□□ 0.13
MDS2-203ENST00000612756 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
MDS2-203ENST00000612756 ADAMTS12P58397 1594 aa15.84■□□□□ 0.13
MDS2-203ENST00000612756 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms