RNA–Protein interactions for RNA: ENST00000612746.1

TPTE-202, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-202ENST00000612746 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
TPTE-202ENST00000612746 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
TPTE-202ENST00000612746 ABCC9O60706 1549 aa21.59■■□□□ 1.05
TPTE-202ENST00000612746 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
TPTE-202ENST00000612746 NACADO15069 1562 aa20.75■□□□□ 0.91
TPTE-202ENST00000612746 DCAF8L2P0C7V8 631 aa20.71■□□□□ 0.91
TPTE-202ENST00000612746 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
TPTE-202ENST00000612746 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
TPTE-202ENST00000612746 DCAF1Q9Y4B6 1507 aa20.55■□□□□ 0.88
TPTE-202ENST00000612746 UNC13AQ9UPW8 1703 aa20.25■□□□□ 0.83
TPTE-202ENST00000612746 PABPN1Q86U42 306 aaKnown RBP eCLIP20.19■□□□□ 0.82
TPTE-202ENST00000612746 BICRAQ9NZM4 1560 aa20.15■□□□□ 0.82
TPTE-202ENST00000612746 SCRIBQ14160 1630 aa20.09■□□□□ 0.81
TPTE-202ENST00000612746 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
TPTE-202ENST00000612746 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
TPTE-202ENST00000612746 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
TPTE-202ENST00000612746 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.72
TPTE-202ENST00000612746 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
TPTE-202ENST00000612746 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
TPTE-202ENST00000612746 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
TPTE-202ENST00000612746 NCAPD3P42695 1498 aa19.18■□□□□ 0.66
TPTE-202ENST00000612746 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
TPTE-202ENST00000612746 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
TPTE-202ENST00000612746 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
TPTE-202ENST00000612746 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
TPTE-202ENST00000612746 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
TPTE-202ENST00000612746 BAZ1BQ9UIG0 1483 aaKnown RBP18.99■□□□□ 0.63
TPTE-202ENST00000612746 RSF1Q96T23 1441 aaPredicted RBP18.92■□□□□ 0.62
TPTE-202ENST00000612746 WIZO95785 1651 aa18.88■□□□□ 0.61
TPTE-202ENST00000612746 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
TPTE-202ENST00000612746 NESP48681 1621 aa18.68■□□□□ 0.58
TPTE-202ENST00000612746 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
TPTE-202ENST00000612746 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
TPTE-202ENST00000612746 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
TPTE-202ENST00000612746 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
TPTE-202ENST00000612746 CFTRP13569 1480 aa18.5■□□□□ 0.55
TPTE-202ENST00000612746 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
TPTE-202ENST00000612746 CUX2O14529 1486 aa18.44■□□□□ 0.54
TPTE-202ENST00000612746 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
TPTE-202ENST00000612746 THOC2Q8NI27 1593 aaKnown RBP18.39■□□□□ 0.53
TPTE-202ENST00000612746 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
TPTE-202ENST00000612746 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
TPTE-202ENST00000612746 CEP164Q9UPV0 1460 aa18.34■□□□□ 0.53
TPTE-202ENST00000612746 MRC2Q9UBG0 1479 aa18.32■□□□□ 0.52
TPTE-202ENST00000612746 WDR62O43379 1518 aa18.27■□□□□ 0.52
TPTE-202ENST00000612746 PRDM2Q13029 1718 aa18.26■□□□□ 0.51
TPTE-202ENST00000612746 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
TPTE-202ENST00000612746 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
TPTE-202ENST00000612746 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
TPTE-202ENST00000612746 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
TPTE-202ENST00000612746 IFT140Q96RY7 1462 aa17.97■□□□□ 0.47
TPTE-202ENST00000612746 CUX1P39880 1505 aa17.93■□□□□ 0.46
TPTE-202ENST00000612746 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
TPTE-202ENST00000612746 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
TPTE-202ENST00000612746 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
TPTE-202ENST00000612746 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
TPTE-202ENST00000612746 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
TPTE-202ENST00000612746 SOGA1O94964 1423 aa17.85■□□□□ 0.45
TPTE-202ENST00000612746 RAD54L2Q9Y4B4 1467 aa17.84■□□□□ 0.45
TPTE-202ENST00000612746 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
TPTE-202ENST00000612746 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.442e-9■■■■□ 23.9
TPTE-202ENST00000612746 EIF4G3O43432 1585 aaKnown RBP17.79■□□□□ 0.44
TPTE-202ENST00000612746 TOP2BQ02880 1626 aa17.77■□□□□ 0.43
TPTE-202ENST00000612746 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
TPTE-202ENST00000612746 SYNJ1O43426 1573 aa17.75■□□□□ 0.43
TPTE-202ENST00000612746 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
TPTE-202ENST00000612746 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
TPTE-202ENST00000612746 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
TPTE-202ENST00000612746 OSCARQ8IYS5 282 aa17.69■□□□□ 0.42
TPTE-202ENST00000612746 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
TPTE-202ENST00000612746 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
TPTE-202ENST00000612746 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
TPTE-202ENST00000612746 SNAPC4Q5SXM2 1469 aa17.61■□□□□ 0.41
TPTE-202ENST00000612746 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
TPTE-202ENST00000612746 FBLN2P98095 1184 aa17.55■□□□□ 0.4
TPTE-202ENST00000612746 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
TPTE-202ENST00000612746 CHD1O14646 1710 aa17.54■□□□□ 0.4
TPTE-202ENST00000612746 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
TPTE-202ENST00000612746 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
TPTE-202ENST00000612746 ERICH3Q5RHP9 1530 aa17.49■□□□□ 0.39
TPTE-202ENST00000612746 ADAMTS12P58397 1594 aa17.44■□□□□ 0.38
TPTE-202ENST00000612746 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
TPTE-202ENST00000612746 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
TPTE-202ENST00000612746 GRIN2AQ12879 1464 aa17.42■□□□□ 0.38
TPTE-202ENST00000612746 IGF1RP08069 1367 aa17.4■□□□□ 0.38
TPTE-202ENST00000612746 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
TPTE-202ENST00000612746 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
TPTE-202ENST00000612746 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
TPTE-202ENST00000612746 NUP160Q12769 1436 aa17.36■□□□□ 0.37
TPTE-202ENST00000612746 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
TPTE-202ENST00000612746 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
TPTE-202ENST00000612746 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
TPTE-202ENST00000612746 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
TPTE-202ENST00000612746 CUL7Q14999 1698 aa17.3■□□□□ 0.36
TPTE-202ENST00000612746 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
TPTE-202ENST00000612746 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.36
TPTE-202ENST00000612746 ARAP1Q96P48 1450 aa17.25■□□□□ 0.35
TPTE-202ENST00000612746 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
TPTE-202ENST00000612746 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
TPTE-202ENST00000612746 JPH4Q96JJ6 628 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms