RNA–Protein interactions for RNA: ENST00000612708.4

SLC1A3-215, Transcript of solute carrier family 1 member 3, humanhuman

TSL 5 BASIC

Gene SLC1A3, Length 3,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-215ENST00000612708 NISCHQ9Y2I1 1504 aa12.87□□□□□ -0.35
SLC1A3-215ENST00000612708 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
SLC1A3-215ENST00000612708 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
SLC1A3-215ENST00000612708 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
SLC1A3-215ENST00000612708 SHROOM4Q9ULL8 1493 aa11.27□□□□□ -0.61
SLC1A3-215ENST00000612708 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
SLC1A3-215ENST00000612708 NACADO15069 1562 aa11.11□□□□□ -0.63
SLC1A3-215ENST00000612708 RB1CC1Q8TDY2 1594 aa11.04□□□□□ -0.64
SLC1A3-215ENST00000612708 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
SLC1A3-215ENST00000612708 BICRAQ9NZM4 1560 aa10.87□□□□□ -0.67
SLC1A3-215ENST00000612708 ABCC9O60706 1549 aa10.79□□□□□ -0.68
SLC1A3-215ENST00000612708 PEG3Q9GZU2 1588 aa10.38□□□□□ -0.75
SLC1A3-215ENST00000612708 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
SLC1A3-215ENST00000612708 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
SLC1A3-215ENST00000612708 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
SLC1A3-215ENST00000612708 HMGXB3Q12766 1538 aa10.25□□□□□ -0.77
SLC1A3-215ENST00000612708 CUX2O14529 1486 aa10.19□□□□□ -0.78
SLC1A3-215ENST00000612708 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
SLC1A3-215ENST00000612708 PRDM2Q13029 1718 aa10.15□□□□□ -0.78
SLC1A3-215ENST00000612708 THOC2Q8NI27 1593 aaKnown RBP10.1□□□□□ -0.79
SLC1A3-215ENST00000612708 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
SLC1A3-215ENST00000612708 CECR2Q9BXF3 1484 aa10.02□□□□□ -0.81
SLC1A3-215ENST00000612708 BAZ1AQ9NRL2 1556 aaPredicted RBP10.01□□□□□ -0.81
SLC1A3-215ENST00000612708 SMARCA4P51532 1647 aa10□□□□□ -0.81
SLC1A3-215ENST00000612708 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
SLC1A3-215ENST00000612708 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
SLC1A3-215ENST00000612708 WDR97A6NE52 1622 aa9.92□□□□□ -0.82
SLC1A3-215ENST00000612708 WDR62O43379 1518 aa9.88□□□□□ -0.83
SLC1A3-215ENST00000612708 TOP2AP11388 1531 aaKnown RBP9.85□□□□□ -0.83
SLC1A3-215ENST00000612708 ATAD2BQ9ULI0 1458 aa9.82□□□□□ -0.84
SLC1A3-215ENST00000612708 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
SLC1A3-215ENST00000612708 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
SLC1A3-215ENST00000612708 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.85
SLC1A3-215ENST00000612708 HRCP23327 699 aa9.71□□□□□ -0.86
SLC1A3-215ENST00000612708 MROH2BQ7Z745 1585 aa9.7□□□□□ -0.86
SLC1A3-215ENST00000612708 WIZO95785 1651 aa9.7□□□□□ -0.86
SLC1A3-215ENST00000612708 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
SLC1A3-215ENST00000612708 PCGF6Q9BYE7 350 aa9.63□□□□□ -0.87
SLC1A3-215ENST00000612708 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
SLC1A3-215ENST00000612708 MRC2Q9UBG0 1479 aa9.57□□□□□ -0.88
SLC1A3-215ENST00000612708 CFTRP13569 1480 aa9.55□□□□□ -0.88
SLC1A3-215ENST00000612708 BAZ1BQ9UIG0 1483 aaKnown RBP9.54□□□□□ -0.88
SLC1A3-215ENST00000612708 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
SLC1A3-215ENST00000612708 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.88
SLC1A3-215ENST00000612708 TARBP1Q13395 1621 aaKnown RBP9.51□□□□□ -0.89
SLC1A3-215ENST00000612708 PDS5BQ9NTI5 1447 aa9.46□□□□□ -0.89
SLC1A3-215ENST00000612708 CHIC1Q5VXU3 224 aa9.46□□□□□ -0.9
SLC1A3-215ENST00000612708 CLASP1Q7Z460 1538 aa9.45□□□□□ -0.9
SLC1A3-215ENST00000612708 ABCC8Q09428 1581 aa9.45□□□□□ -0.9
SLC1A3-215ENST00000612708 NESP48681 1621 aa9.43□□□□□ -0.9
SLC1A3-215ENST00000612708 SHROOM2Q13796 1616 aa9.42□□□□□ -0.9
SLC1A3-215ENST00000612708 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
SLC1A3-215ENST00000612708 TOP2BQ02880 1626 aa9.41□□□□□ -0.9
SLC1A3-215ENST00000612708 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
SLC1A3-215ENST00000612708 DCAF8L2P0C7V8 631 aa9.4□□□□□ -0.9
SLC1A3-215ENST00000612708 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
SLC1A3-215ENST00000612708 CCDC88BA6NC98 1476 aa9.38□□□□□ -0.91
SLC1A3-215ENST00000612708 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
SLC1A3-215ENST00000612708 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
SLC1A3-215ENST00000612708 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
SLC1A3-215ENST00000612708 URB2Q14146 1524 aaKnown RBP9.36□□□□□ -0.91
SLC1A3-215ENST00000612708 EEA1Q15075 1411 aa9.35□□□□□ -0.91
SLC1A3-215ENST00000612708 EIF4G3O43432 1585 aaKnown RBP9.35□□□□□ -0.91
SLC1A3-215ENST00000612708 IFT140Q96RY7 1462 aa9.35□□□□□ -0.91
SLC1A3-215ENST00000612708 CHD1O14646 1710 aa9.34□□□□□ -0.91
SLC1A3-215ENST00000612708 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
SLC1A3-215ENST00000612708 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
SLC1A3-215ENST00000612708 PBRM1Q86U86 1689 aa9.32□□□□□ -0.92
SLC1A3-215ENST00000612708 ERCC6Q03468 1493 aa9.3□□□□□ -0.92
SLC1A3-215ENST00000612708 LOC105371045A0A1W2PR82 267 aa9.29□□□□□ -0.92
SLC1A3-215ENST00000612708 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
SLC1A3-215ENST00000612708 KIF21BO75037 1637 aa9.28□□□□□ -0.92
SLC1A3-215ENST00000612708 FANCD2Q9BXW9 1451 aa9.27□□□□□ -0.93
SLC1A3-215ENST00000612708 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
SLC1A3-215ENST00000612708 ZEB1P37275 1124 aaPredicted RBP9.25□□□□□ -0.93
SLC1A3-215ENST00000612708 CUL7Q14999 1698 aa9.24□□□□□ -0.93
SLC1A3-215ENST00000612708 SYNJ1O43426 1573 aa9.23□□□□□ -0.93
SLC1A3-215ENST00000612708 TOPBP1Q92547 1522 aa9.22□□□□□ -0.93
SLC1A3-215ENST00000612708 MAGI1Q96QZ7 1491 aaPredicted RBP9.19□□□□□ -0.94
SLC1A3-215ENST00000612708 ARHGEF11O15085 1522 aa9.16□□□□□ -0.94
SLC1A3-215ENST00000612708 ABCA10Q8WWZ4 1543 aa9.16□□□□□ -0.94
SLC1A3-215ENST00000612708 KIF13AQ9H1H9 1805 aa9.15□□□□□ -0.94
SLC1A3-215ENST00000612708 MYT1Q01538 1121 aa9.15□□□□□ -0.94
SLC1A3-215ENST00000612708 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
SLC1A3-215ENST00000612708 ADAMTS12P58397 1594 aa9.13□□□□□ -0.95
SLC1A3-215ENST00000612708 CUX1P39880 1505 aa9.13□□□□□ -0.95
SLC1A3-215ENST00000612708 EHMT2Q96KQ7 1210 aa9.11□□□□□ -0.95
SLC1A3-215ENST00000612708 FAM9AQ8IZU1 332 aaPredicted RBP9.09□□□□□ -0.95
SLC1A3-215ENST00000612708 MAPKBP1O60336 1514 aa9.08□□□□□ -0.96
SLC1A3-215ENST00000612708 ARAP1Q96P48 1450 aa9.07□□□□□ -0.96
SLC1A3-215ENST00000612708 RUSC2Q8N2Y8 1516 aa9.07□□□□□ -0.96
SLC1A3-215ENST00000612708 GLI2P10070 1586 aa9.06□□□□□ -0.96
SLC1A3-215ENST00000612708 CTTNBP2Q8WZ74 1663 aa9.06□□□□□ -0.96
SLC1A3-215ENST00000612708 NUP160Q12769 1436 aa9.05□□□□□ -0.96
SLC1A3-215ENST00000612708 MAP3K1Q13233 1512 aa9.05□□□□□ -0.96
SLC1A3-215ENST00000612708 WRNQ14191 1432 aaPredicted RBP eCLIP9.05□□□□□ -0.96
SLC1A3-215ENST00000612708 POLA1P09884 1462 aaPredicted RBP9.05□□□□□ -0.96
SLC1A3-215ENST00000612708 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
SLC1A3-215ENST00000612708 PRXQ9BXM0 1461 aa9.03□□□□□ -0.96
SLC1A3-215ENST00000612708 CENPBP07199 599 aaPredicted RBP9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms