RNA–Protein interactions for RNA: ENST00000612631.1

BECN1-221, Transcript of beclin 1, humanhuman

TSL 4

Gene BECN1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-221ENST00000612631 NISCHQ9Y2I1 1504 aa41.3■■■■■ 4.2
BECN1-221ENST00000612631 ABCC9O60706 1549 aa37.82■■■■□ 3.65
BECN1-221ENST00000612631 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.56
BECN1-221ENST00000612631 DNAJC5BQ9UF47 199 aa36.01■■■■□ 3.36
BECN1-221ENST00000612631 RB1CC1Q8TDY2 1594 aa35.77■■■■□ 3.32
BECN1-221ENST00000612631 NACADO15069 1562 aa35.41■■■■□ 3.26
BECN1-221ENST00000612631 PABPN1Q86U42 306 aaKnown RBP eCLIP35.11■■■■□ 3.21
BECN1-221ENST00000612631 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
BECN1-221ENST00000612631 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
BECN1-221ENST00000612631 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
BECN1-221ENST00000612631 MYO15BQ96JP2 1530 aa34.77■■■■□ 3.16
BECN1-221ENST00000612631 SHROOM4Q9ULL8 1493 aa34.27■■■■□ 3.08
BECN1-221ENST00000612631 CC2D2AQ9P2K1 1620 aa34.16■■■■□ 3.06
BECN1-221ENST00000612631 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
BECN1-221ENST00000612631 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
BECN1-221ENST00000612631 DCAF1Q9Y4B6 1507 aa34.1■■■■□ 3.05
BECN1-221ENST00000612631 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
BECN1-221ENST00000612631 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
BECN1-221ENST00000612631 DNAJC5Q9H3Z4 198 aa33.47■■■□□ 2.95
BECN1-221ENST00000612631 CUX2O14529 1486 aa32.86■■■□□ 2.85
BECN1-221ENST00000612631 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
BECN1-221ENST00000612631 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
BECN1-221ENST00000612631 ATAD2BQ9ULI0 1458 aa32.51■■■□□ 2.79
BECN1-221ENST00000612631 HMGXB3Q12766 1538 aa32.41■■■□□ 2.78
BECN1-221ENST00000612631 SMARCA2P51531 1590 aa32.38■■■□□ 2.77
BECN1-221ENST00000612631 NESP48681 1621 aa32.34■■■□□ 2.77
BECN1-221ENST00000612631 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
BECN1-221ENST00000612631 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
BECN1-221ENST00000612631 BAZ1BQ9UIG0 1483 aaKnown RBP32.15■■■□□ 2.74
BECN1-221ENST00000612631 BAZ1AQ9NRL2 1556 aaPredicted RBP32.09■■■□□ 2.73
BECN1-221ENST00000612631 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
BECN1-221ENST00000612631 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
BECN1-221ENST00000612631 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
BECN1-221ENST00000612631 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
BECN1-221ENST00000612631 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
BECN1-221ENST00000612631 TRIM41Q8WV44 630 aa31.71■■■□□ 2.67
BECN1-221ENST00000612631 CADPSQ9ULU8 1353 aa31.66■■■□□ 2.66
BECN1-221ENST00000612631 MRC2Q9UBG0 1479 aa31.63■■■□□ 2.65
BECN1-221ENST00000612631 WDR62O43379 1518 aa31.59■■■□□ 2.65
BECN1-221ENST00000612631 WIZO95785 1651 aa31.39■■■□□ 2.62
BECN1-221ENST00000612631 CEP164Q9UPV0 1460 aa31.38■■■□□ 2.61
BECN1-221ENST00000612631 FANCD2Q9BXW9 1451 aa31.3■■■□□ 2.6
BECN1-221ENST00000612631 OSCARQ8IYS5 282 aa31.23■■■□□ 2.59
BECN1-221ENST00000612631 CFTRP13569 1480 aa31.2■■■□□ 2.58
BECN1-221ENST00000612631 URB2Q14146 1524 aaKnown RBP31.09■■■□□ 2.57
BECN1-221ENST00000612631 TOP2AP11388 1531 aaKnown RBP30.97■■■□□ 2.55
BECN1-221ENST00000612631 RSF1Q96T23 1441 aaPredicted RBP30.95■■■□□ 2.54
BECN1-221ENST00000612631 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
BECN1-221ENST00000612631 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
BECN1-221ENST00000612631 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
BECN1-221ENST00000612631 PRDM2Q13029 1718 aa30.84■■■□□ 2.53
BECN1-221ENST00000612631 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
BECN1-221ENST00000612631 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
BECN1-221ENST00000612631 ARHGEF11O15085 1522 aa30.77■■■□□ 2.52
BECN1-221ENST00000612631 TOPBP1Q92547 1522 aa30.65■■■□□ 2.5
BECN1-221ENST00000612631 CCDC88BA6NC98 1476 aa30.61■■■□□ 2.49
BECN1-221ENST00000612631 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
BECN1-221ENST00000612631 ABCC8Q09428 1581 aa30.54■■■□□ 2.48
BECN1-221ENST00000612631 CYB5RLQ6IPT4 315 aa30.52■■■□□ 2.48
BECN1-221ENST00000612631 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
BECN1-221ENST00000612631 CHD1O14646 1710 aa30.47■■■□□ 2.47
BECN1-221ENST00000612631 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
BECN1-221ENST00000612631 AQRO60306 1485 aaKnown RBP eCLIP30.43■■■□□ 2.46
BECN1-221ENST00000612631 ARAP1Q96P48 1450 aa30.43■■■□□ 2.46
BECN1-221ENST00000612631 TRHP20396 242 aaPredicted RBP30.34■■■□□ 2.45
BECN1-221ENST00000612631 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
BECN1-221ENST00000612631 FBLN2P98095 1184 aa30.29■■■□□ 2.44
BECN1-221ENST00000612631 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
BECN1-221ENST00000612631 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
BECN1-221ENST00000612631 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
BECN1-221ENST00000612631 SOGA1O94964 1423 aa30.13■■■□□ 2.41
BECN1-221ENST00000612631 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
BECN1-221ENST00000612631 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
BECN1-221ENST00000612631 SYNJ1O43426 1573 aa30.03■■■□□ 2.4
BECN1-221ENST00000612631 FGD5Q6ZNL6 1462 aa30.03■■■□□ 2.4
BECN1-221ENST00000612631 MAGI1Q96QZ7 1491 aaPredicted RBP30.02■■■□□ 2.4
BECN1-221ENST00000612631 CHMP7Q8WUX9 453 aaPredicted RBP30■■■□□ 2.39
BECN1-221ENST00000612631 GRIN2BQ13224 1484 aa29.95■■■□□ 2.39
BECN1-221ENST00000612631 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
BECN1-221ENST00000612631 CUX1P39880 1505 aa29.92■■■□□ 2.38
BECN1-221ENST00000612631 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
BECN1-221ENST00000612631 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
BECN1-221ENST00000612631 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
BECN1-221ENST00000612631 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
BECN1-221ENST00000612631 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
BECN1-221ENST00000612631 ERCC6L2Q5T890 1561 aa29.61■■■□□ 2.33
BECN1-221ENST00000612631 GRIN2AQ12879 1464 aa29.57■■■□□ 2.32
BECN1-221ENST00000612631 NUP160Q12769 1436 aa29.52■■■□□ 2.32
BECN1-221ENST00000612631 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
BECN1-221ENST00000612631 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
BECN1-221ENST00000612631 SHROOM2Q13796 1616 aa29.45■■■□□ 2.31
BECN1-221ENST00000612631 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
BECN1-221ENST00000612631 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
BECN1-221ENST00000612631 KIF13AQ9H1H9 1805 aa29.36■■■□□ 2.29
BECN1-221ENST00000612631 BIVM-ERCC5R4GMW8 1640 aa29.3■■■□□ 2.28
BECN1-221ENST00000612631 TOP2BQ02880 1626 aa29.29■■■□□ 2.28
BECN1-221ENST00000612631 ERICH3Q5RHP9 1530 aa29.29■■■□□ 2.28
BECN1-221ENST00000612631 PRG4Q92954 1404 aaPredicted RBP29.24■■■□□ 2.27
BECN1-221ENST00000612631 JPH4Q96JJ6 628 aa29.17■■■□□ 2.26
BECN1-221ENST00000612631 ABCC10Q5T3U5 1492 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms