RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 NISCHQ9Y2I1 1504 aa51.44■■■■■ 5.83
PMPCA-207ENST00000612553 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
PMPCA-207ENST00000612553 ABCC9O60706 1549 aa45.73■■■■■ 4.91
PMPCA-207ENST00000612553 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
PMPCA-207ENST00000612553 NACADO15069 1562 aa43.47■■■■■ 4.55
PMPCA-207ENST00000612553 DCAF8L2P0C7V8 631 aa43.31■■■■■ 4.52
PMPCA-207ENST00000612553 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
PMPCA-207ENST00000612553 ZCCHC6Q5VYS8 1495 aaKnown RBP42.69■■■■■ 4.42
PMPCA-207ENST00000612553 UNC13AQ9UPW8 1703 aa42.69■■■■■ 4.42
PMPCA-207ENST00000612553 PABPN1Q86U42 306 aaKnown RBP eCLIP42.62■■■■■ 4.41
PMPCA-207ENST00000612553 DNAJC5BQ9UF47 199 aa42.61■■■■■ 4.41
PMPCA-207ENST00000612553 DCAF1Q9Y4B6 1507 aa42.53■■■■■ 4.4
PMPCA-207ENST00000612553 BICRAQ9NZM4 1560 aa42.38■■■■■ 4.37
PMPCA-207ENST00000612553 SCRIBQ14160 1630 aa41.95■■■■■ 4.31
PMPCA-207ENST00000612553 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
PMPCA-207ENST00000612553 CC2D2AQ9P2K1 1620 aa41.34■■■■■ 4.21
PMPCA-207ENST00000612553 EIF4G1Q04637 1599 aaKnown RBP41.33■■■■■ 4.21
PMPCA-207ENST00000612553 CECR2Q9BXF3 1484 aa41.18■■■■■ 4.18
PMPCA-207ENST00000612553 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
PMPCA-207ENST00000612553 SMARCA4P51532 1647 aa40.07■■■■■ 4.01
PMPCA-207ENST00000612553 ATAD2BQ9ULI0 1458 aa40.02■■■■■ 4
PMPCA-207ENST00000612553 SMARCA2P51531 1590 aa39.96■■■■□ 3.99
PMPCA-207ENST00000612553 BAZ1AQ9NRL2 1556 aaPredicted RBP39.93■■■■□ 3.98
PMPCA-207ENST00000612553 HMGXB3Q12766 1538 aa39.85■■■■□ 3.97
PMPCA-207ENST00000612553 PEG3Q9GZU2 1588 aa39.68■■■■□ 3.94
PMPCA-207ENST00000612553 BAZ1BQ9UIG0 1483 aaKnown RBP39.67■■■■□ 3.94
PMPCA-207ENST00000612553 MROH2BQ7Z745 1585 aa39.63■■■■□ 3.93
PMPCA-207ENST00000612553 ERCC6Q03468 1493 aa39.49■■■■□ 3.91
PMPCA-207ENST00000612553 NESP48681 1621 aa39.36■■■■□ 3.89
PMPCA-207ENST00000612553 CUX2O14529 1486 aa39.32■■■■□ 3.89
PMPCA-207ENST00000612553 LAMC3Q9Y6N6 1575 aa39.18■■■■□ 3.86
PMPCA-207ENST00000612553 WIZO95785 1651 aa39.18■■■■□ 3.86
PMPCA-207ENST00000612553 DNAJC5Q9H3Z4 198 aa38.96■■■■□ 3.83
PMPCA-207ENST00000612553 PDS5BQ9NTI5 1447 aa38.95■■■■□ 3.83
PMPCA-207ENST00000612553 RSF1Q96T23 1441 aaPredicted RBP38.92■■■■□ 3.82
PMPCA-207ENST00000612553 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
PMPCA-207ENST00000612553 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
PMPCA-207ENST00000612553 KIF21AQ7Z4S6 1674 aa38.89■■■■□ 3.82
PMPCA-207ENST00000612553 TOP2AP11388 1531 aaKnown RBP38.71■■■■□ 3.79
PMPCA-207ENST00000612553 MRC2Q9UBG0 1479 aa38.57■■■■□ 3.76
PMPCA-207ENST00000612553 CFTRP13569 1480 aa38.53■■■■□ 3.76
PMPCA-207ENST00000612553 CEP164Q9UPV0 1460 aa38.49■■■■□ 3.75
PMPCA-207ENST00000612553 WDR62O43379 1518 aa38.47■■■■□ 3.75
PMPCA-207ENST00000612553 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
PMPCA-207ENST00000612553 CCDC88BA6NC98 1476 aa38.26■■■■□ 3.72
PMPCA-207ENST00000612553 PRDM2Q13029 1718 aa38.19■■■■□ 3.7
PMPCA-207ENST00000612553 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
PMPCA-207ENST00000612553 TOPBP1Q92547 1522 aa37.77■■■■□ 3.64
PMPCA-207ENST00000612553 ABCC8Q09428 1581 aa37.75■■■■□ 3.63
PMPCA-207ENST00000612553 IFT140Q96RY7 1462 aa37.71■■■■□ 3.63
PMPCA-207ENST00000612553 DNMBPQ6XZF7 1577 aa37.67■■■■□ 3.62
PMPCA-207ENST00000612553 OSCARQ8IYS5 282 aa37.59■■■■□ 3.61
PMPCA-207ENST00000612553 ZNF608Q9ULD9 1512 aaPredicted RBP37.59■■■■□ 3.61
PMPCA-207ENST00000612553 SUPT5HO00267 1087 aaKnown RBP37.43■■■■□ 3.58
PMPCA-207ENST00000612553 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
PMPCA-207ENST00000612553 EIF4G3O43432 1585 aaKnown RBP37.42■■■■□ 3.58
PMPCA-207ENST00000612553 POLA1P09884 1462 aaPredicted RBP37.4■■■■□ 3.58
PMPCA-207ENST00000612553 TRIM41Q8WV44 630 aa37.36■■■■□ 3.57
PMPCA-207ENST00000612553 AQRO60306 1485 aaKnown RBP eCLIP37.3■■■■□ 3.567e-8■■■□□ 17.6
PMPCA-207ENST00000612553 SOGA1O94964 1423 aa37.25■■■■□ 3.55
PMPCA-207ENST00000612553 RAD54L2Q9Y4B4 1467 aa37.25■■■■□ 3.55
PMPCA-207ENST00000612553 CUX1P39880 1505 aa37.21■■■■□ 3.55
PMPCA-207ENST00000612553 FGD5Q6ZNL6 1462 aa37.21■■■■□ 3.55
PMPCA-207ENST00000612553 TDRD9Q8NDG6 1382 aaKnown RBP37.12■■■■□ 3.53
PMPCA-207ENST00000612553 CHD1O14646 1710 aa37.09■■■■□ 3.53
PMPCA-207ENST00000612553 WDR97A6NE52 1622 aa37.09■■■■□ 3.53
PMPCA-207ENST00000612553 RIMBP3CA6NJZ7 1639 aa37.04■■■■□ 3.52
PMPCA-207ENST00000612553 RIMBP3BA6NNM3 1639 aa37.04■■■■□ 3.52
PMPCA-207ENST00000612553 RIMBP3Q9UFD9 1639 aa37.04■■■■□ 3.52
PMPCA-207ENST00000612553 FBLN2P98095 1184 aa37.02■■■■□ 3.52
PMPCA-207ENST00000612553 ARHGEF11O15085 1522 aa36.95■■■■□ 3.51
PMPCA-207ENST00000612553 SNAPC4Q5SXM2 1469 aa36.93■■■■□ 3.5
PMPCA-207ENST00000612553 GRIN2BQ13224 1484 aa36.89■■■■□ 3.5
PMPCA-207ENST00000612553 MAGI1Q96QZ7 1491 aaPredicted RBP36.87■■■■□ 3.49
PMPCA-207ENST00000612553 ABCA10Q8WWZ4 1543 aa36.81■■■■□ 3.48
PMPCA-207ENST00000612553 CHMP7Q8WUX9 453 aaPredicted RBP36.8■■■■□ 3.48
PMPCA-207ENST00000612553 GAPVD1Q14C86 1478 aa36.8■■■■□ 3.48
PMPCA-207ENST00000612553 PBRM1Q86U86 1689 aa36.77■■■■□ 3.48
PMPCA-207ENST00000612553 WRNQ14191 1432 aaPredicted RBP eCLIP36.74■■■■□ 3.47
PMPCA-207ENST00000612553 SYNJ2O15056 1496 aa36.74■■■■□ 3.47
PMPCA-207ENST00000612553 TOP2BQ02880 1626 aa36.73■■■■□ 3.47
PMPCA-207ENST00000612553 ABCA5Q8WWZ7 1642 aa36.73■■■■□ 3.47
PMPCA-207ENST00000612553 BIVM-ERCC5R4GMW8 1640 aa36.73■■■■□ 3.47
PMPCA-207ENST00000612553 SYNJ1O43426 1573 aa36.7■■■■□ 3.46
PMPCA-207ENST00000612553 CYB5RLQ6IPT4 315 aa36.67■■■■□ 3.46
PMPCA-207ENST00000612553 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
PMPCA-207ENST00000612553 ARAP1Q96P48 1450 aa36.6■■■■□ 3.45
PMPCA-207ENST00000612553 ADAMTS12P58397 1594 aa36.43■■■■□ 3.42
PMPCA-207ENST00000612553 GRIN2AQ12879 1464 aa36.42■■■■□ 3.42
PMPCA-207ENST00000612553 ERICH3Q5RHP9 1530 aa36.37■■■■□ 3.41
PMPCA-207ENST00000612553 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
PMPCA-207ENST00000612553 NUP160Q12769 1436 aa36.27■■■■□ 3.4
PMPCA-207ENST00000612553 CEP170Q5SW79 1584 aa36.26■■■■□ 3.39
PMPCA-207ENST00000612553 TRHP20396 242 aaPredicted RBP36.18■■■■□ 3.38
PMPCA-207ENST00000612553 ERCC6L2Q5T890 1561 aa36.09■■■■□ 3.37
PMPCA-207ENST00000612553 SHROOM2Q13796 1616 aa36.08■■■■□ 3.37
PMPCA-207ENST00000612553 KIF27Q86VH2 1401 aa36.02■■■■□ 3.36
PMPCA-207ENST00000612553 IGF1RP08069 1367 aa35.96■■■■□ 3.35
PMPCA-207ENST00000612553 JPH4Q96JJ6 628 aa35.92■■■■□ 3.34
PMPCA-207ENST00000612553 RUSC2Q8N2Y8 1516 aa35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms