RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, humanhuman

Gene CCND3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-222ENST00000612455 NISCHQ9Y2I1 1504 aa40.92■■■■■ 4.14
CCND3-222ENST00000612455 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
CCND3-222ENST00000612455 ABCC9O60706 1549 aa35.73■■■■□ 3.31
CCND3-222ENST00000612455 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
CCND3-222ENST00000612455 NACADO15069 1562 aa34.29■■■■□ 3.08
CCND3-222ENST00000612455 DCAF8L2P0C7V8 631 aa34.18■■■■□ 3.06
CCND3-222ENST00000612455 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CCND3-222ENST00000612455 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
CCND3-222ENST00000612455 DCAF1Q9Y4B6 1507 aa33.89■■■■□ 3.02
CCND3-222ENST00000612455 UNC13AQ9UPW8 1703 aa33.57■■■□□ 2.96
CCND3-222ENST00000612455 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
CCND3-222ENST00000612455 BICRAQ9NZM4 1560 aa33.34■■■□□ 2.93
CCND3-222ENST00000612455 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
CCND3-222ENST00000612455 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
CCND3-222ENST00000612455 SHROOM4Q9ULL8 1493 aa32.97■■■□□ 2.87
CCND3-222ENST00000612455 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
CCND3-222ENST00000612455 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
CCND3-222ENST00000612455 CECR2Q9BXF3 1484 aa32.14■■■□□ 2.74
CCND3-222ENST00000612455 SMARCA4P51532 1647 aa31.75■■■□□ 2.67
CCND3-222ENST00000612455 BAZ1AQ9NRL2 1556 aaPredicted RBP31.7■■■□□ 2.67
CCND3-222ENST00000612455 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
CCND3-222ENST00000612455 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
CCND3-222ENST00000612455 SMARCA2P51531 1590 aa31.57■■■□□ 2.64
CCND3-222ENST00000612455 MROH2BQ7Z745 1585 aa31.52■■■□□ 2.64
CCND3-222ENST00000612455 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
CCND3-222ENST00000612455 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
CCND3-222ENST00000612455 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
CCND3-222ENST00000612455 WIZO95785 1651 aa31.15■■■□□ 2.58
CCND3-222ENST00000612455 RSF1Q96T23 1441 aaPredicted RBP31.13■■■□□ 2.57
CCND3-222ENST00000612455 NESP48681 1621 aa30.9■■■□□ 2.54
CCND3-222ENST00000612455 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
CCND3-222ENST00000612455 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
CCND3-222ENST00000612455 ERCC6Q03468 1493 aa30.77■■■□□ 2.52
CCND3-222ENST00000612455 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
CCND3-222ENST00000612455 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
CCND3-222ENST00000612455 CUX2O14529 1486 aa30.57■■■□□ 2.48
CCND3-222ENST00000612455 CFTRP13569 1480 aa30.51■■■□□ 2.48
CCND3-222ENST00000612455 KIF21AQ7Z4S6 1674 aa30.51■■■□□ 2.47
CCND3-222ENST00000612455 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
CCND3-222ENST00000612455 THOC2Q8NI27 1593 aaKnown RBP30.45■■■□□ 2.47
CCND3-222ENST00000612455 FANCD2Q9BXW9 1451 aa30.33■■■□□ 2.45
CCND3-222ENST00000612455 MRC2Q9UBG0 1479 aa30.29■■■□□ 2.44
CCND3-222ENST00000612455 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
CCND3-222ENST00000612455 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
CCND3-222ENST00000612455 WDR62O43379 1518 aa30.2■■■□□ 2.42
CCND3-222ENST00000612455 SUPT5HO00267 1087 aaKnown RBP30.17■■■□□ 2.42
CCND3-222ENST00000612455 URB2Q14146 1524 aaKnown RBP30.06■■■□□ 2.4
CCND3-222ENST00000612455 DNAJC5Q9H3Z4 198 aa29.87■■■□□ 2.37
CCND3-222ENST00000612455 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
CCND3-222ENST00000612455 TOPBP1Q92547 1522 aa29.85■■■□□ 2.37
CCND3-222ENST00000612455 DNMBPQ6XZF7 1577 aa29.78■■■□□ 2.36
CCND3-222ENST00000612455 IFT140Q96RY7 1462 aa29.69■■■□□ 2.34
CCND3-222ENST00000612455 POLA1P09884 1462 aaPredicted RBP29.58■■■□□ 2.33
CCND3-222ENST00000612455 CUX1P39880 1505 aa29.56■■■□□ 2.32
CCND3-222ENST00000612455 ZNF608Q9ULD9 1512 aaPredicted RBP29.56■■■□□ 2.32
CCND3-222ENST00000612455 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
CCND3-222ENST00000612455 SOGA1O94964 1423 aa29.47■■■□□ 2.31
CCND3-222ENST00000612455 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
CCND3-222ENST00000612455 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.31
CCND3-222ENST00000612455 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
CCND3-222ENST00000612455 AQRO60306 1485 aaKnown RBP eCLIP29.39■■■□□ 2.3
CCND3-222ENST00000612455 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
CCND3-222ENST00000612455 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
CCND3-222ENST00000612455 OSCARQ8IYS5 282 aa29.31■■■□□ 2.28
CCND3-222ENST00000612455 WDR97A6NE52 1622 aa29.3■■■□□ 2.28
CCND3-222ENST00000612455 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
CCND3-222ENST00000612455 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
CCND3-222ENST00000612455 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
CCND3-222ENST00000612455 ABCA10Q8WWZ4 1543 aa29.22■■■□□ 2.27
CCND3-222ENST00000612455 GRIN2BQ13224 1484 aa29.13■■■□□ 2.25
CCND3-222ENST00000612455 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
CCND3-222ENST00000612455 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
CCND3-222ENST00000612455 CHD1O14646 1710 aa29.07■■■□□ 2.24
CCND3-222ENST00000612455 SNAPC4Q5SXM2 1469 aa29.07■■■□□ 2.24
CCND3-222ENST00000612455 MAGI1Q96QZ7 1491 aaPredicted RBP29.06■■■□□ 2.24
CCND3-222ENST00000612455 FBLN2P98095 1184 aa29.02■■■□□ 2.24
CCND3-222ENST00000612455 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
CCND3-222ENST00000612455 CHMP7Q8WUX9 453 aaPredicted RBP28.96■■■□□ 2.23
CCND3-222ENST00000612455 SYNJ2O15056 1496 aa28.95■■■□□ 2.22
CCND3-222ENST00000612455 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
CCND3-222ENST00000612455 RIMBP3CA6NJZ7 1639 aa28.8■■■□□ 2.2
CCND3-222ENST00000612455 RIMBP3BA6NNM3 1639 aa28.8■■■□□ 2.2
CCND3-222ENST00000612455 RIMBP3Q9UFD9 1639 aa28.8■■■□□ 2.2
CCND3-222ENST00000612455 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
CCND3-222ENST00000612455 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
CCND3-222ENST00000612455 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
CCND3-222ENST00000612455 FHAD1B1AJZ9 1412 aa28.78■■■□□ 2.2
CCND3-222ENST00000612455 GRIN2AQ12879 1464 aa28.74■■■□□ 2.19
CCND3-222ENST00000612455 KIF27Q86VH2 1401 aa28.71■■■□□ 2.19
CCND3-222ENST00000612455 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
CCND3-222ENST00000612455 IGF1RP08069 1367 aa28.69■■■□□ 2.18
CCND3-222ENST00000612455 NUP160Q12769 1436 aa28.66■■■□□ 2.18
CCND3-222ENST00000612455 CEP170Q5SW79 1584 aa28.6■■■□□ 2.17
CCND3-222ENST00000612455 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
CCND3-222ENST00000612455 CYB5RLQ6IPT4 315 aa28.55■■■□□ 2.16
CCND3-222ENST00000612455 CUL7Q14999 1698 aa28.53■■■□□ 2.16
CCND3-222ENST00000612455 CARMIL1Q5VZK9 1371 aa28.48■■■□□ 2.15
CCND3-222ENST00000612455 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
CCND3-222ENST00000612455 SHROOM2Q13796 1616 aa28.44■■■□□ 2.14
CCND3-222ENST00000612455 JPH4Q96JJ6 628 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms