RNA–Protein interactions for RNA: ENST00000612040.2

FAM238B-204, Transcript of family with sequence similarity 238 member B, humanhuman

BASIC

Gene FAM238B, Length 423 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-204ENST00000612040 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
FAM238B-204ENST00000612040 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
FAM238B-204ENST00000612040 ABCC9O60706 1549 aa18.94■□□□□ 0.62
FAM238B-204ENST00000612040 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
FAM238B-204ENST00000612040 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
FAM238B-204ENST00000612040 NACADO15069 1562 aa17.98■□□□□ 0.47
FAM238B-204ENST00000612040 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
FAM238B-204ENST00000612040 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
FAM238B-204ENST00000612040 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
FAM238B-204ENST00000612040 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
FAM238B-204ENST00000612040 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
FAM238B-204ENST00000612040 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
FAM238B-204ENST00000612040 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
FAM238B-204ENST00000612040 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
FAM238B-204ENST00000612040 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
FAM238B-204ENST00000612040 EIF4G1Q04637 1599 aaKnown RBP17.05■□□□□ 0.32
FAM238B-204ENST00000612040 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
FAM238B-204ENST00000612040 CECR2Q9BXF3 1484 aa16.97■□□□□ 0.31
FAM238B-204ENST00000612040 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
FAM238B-204ENST00000612040 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
FAM238B-204ENST00000612040 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
FAM238B-204ENST00000612040 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
FAM238B-204ENST00000612040 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
FAM238B-204ENST00000612040 SMARCA2P51531 1590 aa16.58■□□□□ 0.24
FAM238B-204ENST00000612040 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
FAM238B-204ENST00000612040 WIZO95785 1651 aa16.46■□□□□ 0.23
FAM238B-204ENST00000612040 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
FAM238B-204ENST00000612040 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
FAM238B-204ENST00000612040 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
FAM238B-204ENST00000612040 NESP48681 1621 aa16.37■□□□□ 0.21
FAM238B-204ENST00000612040 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
FAM238B-204ENST00000612040 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
FAM238B-204ENST00000612040 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
FAM238B-204ENST00000612040 TOP2AP11388 1531 aaKnown RBP16.2■□□□□ 0.18
FAM238B-204ENST00000612040 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
FAM238B-204ENST00000612040 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
FAM238B-204ENST00000612040 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
FAM238B-204ENST00000612040 KIF21AQ7Z4S6 1674 aa16.05■□□□□ 0.16
FAM238B-204ENST00000612040 CFTRP13569 1480 aa16.04■□□□□ 0.16
FAM238B-204ENST00000612040 CUX2O14529 1486 aa16.02■□□□□ 0.15
FAM238B-204ENST00000612040 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
FAM238B-204ENST00000612040 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
FAM238B-204ENST00000612040 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
FAM238B-204ENST00000612040 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
FAM238B-204ENST00000612040 URB2Q14146 1524 aaKnown RBP15.86■□□□□ 0.13
FAM238B-204ENST00000612040 WDR62O43379 1518 aa15.84■□□□□ 0.13
FAM238B-204ENST00000612040 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
FAM238B-204ENST00000612040 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
FAM238B-204ENST00000612040 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
FAM238B-204ENST00000612040 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
FAM238B-204ENST00000612040 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
FAM238B-204ENST00000612040 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
FAM238B-204ENST00000612040 IFT140Q96RY7 1462 aa15.62■□□□□ 0.09
FAM238B-204ENST00000612040 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
FAM238B-204ENST00000612040 SOGA1O94964 1423 aa15.61■□□□□ 0.09
FAM238B-204ENST00000612040 CUX1P39880 1505 aa15.61■□□□□ 0.09
FAM238B-204ENST00000612040 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
FAM238B-204ENST00000612040 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
FAM238B-204ENST00000612040 TDRD9Q8NDG6 1382 aaKnown RBP15.58■□□□□ 0.08
FAM238B-204ENST00000612040 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
FAM238B-204ENST00000612040 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
FAM238B-204ENST00000612040 FBLN2P98095 1184 aa15.53■□□□□ 0.08
FAM238B-204ENST00000612040 TARBP1Q13395 1621 aaKnown RBP15.53■□□□□ 0.08
FAM238B-204ENST00000612040 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
FAM238B-204ENST00000612040 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
FAM238B-204ENST00000612040 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
FAM238B-204ENST00000612040 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
FAM238B-204ENST00000612040 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
FAM238B-204ENST00000612040 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
FAM238B-204ENST00000612040 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
FAM238B-204ENST00000612040 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
FAM238B-204ENST00000612040 SNAPC4Q5SXM2 1469 aa15.36■□□□□ 0.05
FAM238B-204ENST00000612040 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
FAM238B-204ENST00000612040 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
FAM238B-204ENST00000612040 WDR97A6NE52 1622 aa15.3■□□□□ 0.04
FAM238B-204ENST00000612040 CHD1O14646 1710 aa15.3■□□□□ 0.04
FAM238B-204ENST00000612040 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.04
FAM238B-204ENST00000612040 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
FAM238B-204ENST00000612040 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
FAM238B-204ENST00000612040 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
FAM238B-204ENST00000612040 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
FAM238B-204ENST00000612040 IGF1RP08069 1367 aa15.2■□□□□ 0.02
FAM238B-204ENST00000612040 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
FAM238B-204ENST00000612040 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
FAM238B-204ENST00000612040 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
FAM238B-204ENST00000612040 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
FAM238B-204ENST00000612040 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
FAM238B-204ENST00000612040 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
FAM238B-204ENST00000612040 ERICH3Q5RHP9 1530 aa15.15■□□□□ 0.02
FAM238B-204ENST00000612040 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
FAM238B-204ENST00000612040 RUSC2Q8N2Y8 1516 aa15.13■□□□□ 0.01
FAM238B-204ENST00000612040 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
FAM238B-204ENST00000612040 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
FAM238B-204ENST00000612040 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
FAM238B-204ENST00000612040 JPH4Q96JJ6 628 aa15.08■□□□□ 0
FAM238B-204ENST00000612040 CEP170Q5SW79 1584 aa15.07■□□□□ 0
FAM238B-204ENST00000612040 NUP160Q12769 1436 aa15.06■□□□□ 0
FAM238B-204ENST00000612040 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ -0
FAM238B-204ENST00000612040 ARAP1Q96P48 1450 aa15.05■□□□□ -0
FAM238B-204ENST00000612040 CHIC1Q5VXU3 224 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms